CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.754e-21
Identity = 63/135 (46.67%), Postives = 81/135 (60.00%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG I  ++  D VPKTAENF ALC    G+ Y G+IFHR I  FM+Q             SI+G KF DE     +H+  G+LSMAN+GPNTNGSQFFI+    P L+G + VFG V  G +++  +E   +GSG
Sbjct:   15 LGKITFKLYDDVVPKTAENFRALCTGEKGFGYKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADE-NFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIVKKIESFGSGSG 148          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.754e-21
Identity = 65/141 (46.10%), Postives = 79/141 (56.03%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G I  E+  D  P+TAENF ALC        SG   +Y  + FHR I GFM Q             SI+G KF DE     KH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V+ G +V+  +EK  + SG
Sbjct:   18 GRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADE-NFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG 157          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CP20C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic OS=Arabidopsis thaliana GN=CYP20-3 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.754e-21
Identity = 63/132 (47.73%), Postives = 76/132 (57.58%), Query Frame = 1
Query:   70 VPKTAENFLALCASGY---YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            VPKT ENF ALC       Y G+ FHR IK FMIQ             SI+G KF DE   +LKH   GILSMAN+GPNTNGSQFFI   K   L+  + VFG+VI G +++  +E  +T + D P    RI
Sbjct:  120 VPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDE-NFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLESQETRAFDVPKKGCRI 250          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIF_BOVIN (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Bos taurus GN=PPIF PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21
Identity = 63/135 (46.67%), Postives = 77/135 (57.04%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D VPKTAENF ALC    G+ Y G+ FHR I  FM Q             SI+G +F DE    LKH   G+LSMAN+GPNTNGSQFFI   K   L+G + VFG V  G +V+  +E   + SG
Sbjct:   60 LGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDE-NFKLKHEGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSG 193          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21
Identity = 62/148 (41.89%), Postives = 83/148 (56.08%), Query Frame = 1
Query:   43 IKCEIACDEVPKTAENFLALCASGY----------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            I  E+  D VP+TAENF  LC +            +  +IFHR I  FMIQ             SI+G+KF DE     KH+   +LSMAN+G NTNGSQFFI+    PHL+G + VFGRV+ G  V+  +E  +T + DRP  +++I
Sbjct:   34 IVLELYADRVPRTAENFRVLCTNTSKLASTGQPLSFRNSIFHRVIPKFMIQGGDFTRADGTGGESIYGEKFQDEDLTG-KHDVPFLLSMANAGANTNGSQFFITTVPTPHLDGKHVVFGRVLKGKGVVRRVESVETVASDRPKEDVKI 180          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP9_CAEEL (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis elegans GN=cyn-9 PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.290e-21
Identity = 62/162 (38.27%), Postives = 89/162 (54.94%), Query Frame = 1
Query:   10 MSVTLHTNL-GDIKCEIACDEVPKTAENFLALC-----------ASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRIN 456
            + +++  NL G I+  +  ++ PKT ENF ALC           A  +Y    FHR +K FMIQ             SI+G+ F+DE +  LKH+   +LSMAN GPN+N SQFFI+ A  PH NG + VFG V+ G  V+D ++        +PLA++ I+
Sbjct:    9 LDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDITEGDGRGGFSIYGRYFDDE-KFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNLAVDDKSKPLAKVLIS 169          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIH_EMENI (Peptidyl-prolyl cis-trans isomerase H OS=Emericella nidulans GN=cyp3 PE=3 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 63/151 (41.72%), Postives = 87/151 (57.62%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASGY---------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGK-KFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            LG +K E+  D  P+TAENF   C             Y G+ FHR IK FMIQ             +I+G  KF+DE   +L+H+  G+LSMANSGPNTNG QFFI+    P LNG + VFG+VI G +++ ++E  +T + D+P  ++ I
Sbjct:   29 LGRLKLELFADVTPRTAENFRQFCTGESKNQQGRPQGYKGSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFSDE-NFTLRHDRPGLLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVIDGMDIVRMIENTRT-TRDKPNQDVVI 177          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIG_RAT (Peptidyl-prolyl cis-trans isomerase G OS=Rattus norvegicus GN=Ppig PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 61/151 (40.40%), Postives = 82/151 (54.30%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASG-----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            G +  E+  D  PKT ENF  LC              +Y   +FHR +K FM+Q             SI+G  F DE   ++KHN   +LSMAN G +TNGSQFFI+    PHL+G + VFG+VI G EV+  +E  +T +  +P AE+RI
Sbjct:   22 GRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDE-SFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRI 171          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIG_MOUSE (Peptidyl-prolyl cis-trans isomerase G OS=Mus musculus GN=Ppig PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 61/151 (40.40%), Postives = 82/151 (54.30%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASG-----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            G +  E+  D  PKT ENF  LC              +Y   +FHR +K FM+Q             SI+G  F DE   ++KHN   +LSMAN G +TNGSQFFI+    PHL+G + VFG+VI G EV+  +E  +T +  +P AE+RI
Sbjct:   22 GRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDE-SFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRI 171          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIG_HUMAN (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.991e-21
Identity = 61/151 (40.40%), Postives = 82/151 (54.30%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASG-----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            G +  E+  D  PKT ENF  LC              +Y   +FHR +K FM+Q             SI+G  F DE   ++KHN   +LSMAN G +TNGSQFFI+    PHL+G + VFG+VI G EV+  +E  +T +  +P AE+RI
Sbjct:   22 GRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDE-SFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRI 171          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPIA_CANAL1.754e-2146.67Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
CYPH_CATRO1.754e-2146.10Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CP20C_ARATH1.754e-2147.73Peptidyl-prolyl cis-trans isomerase CYP20-3, chlor... [more]
PPIF_BOVIN2.290e-2146.67Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPID_USTMA2.290e-2141.89Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]
CYP9_CAEEL2.290e-2138.27Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIH_EMENI2.991e-2141.72Peptidyl-prolyl cis-trans isomerase H OS=Emericell... [more]
PPIG_RAT2.991e-2140.40Peptidyl-prolyl cis-trans isomerase G OS=Rattus no... [more]
PPIG_MOUSE2.991e-2140.40Peptidyl-prolyl cis-trans isomerase G OS=Mus muscu... [more]
PPIG_HUMAN2.991e-2140.40Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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