CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_PARPR (Peptidyl-prolyl cis-trans isomerase OS=Paramecium primaurelia PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.102e-21
Identity = 62/134 (46.27%), Postives = 81/134 (60.45%), Query Frame = 1
Query:   64 DEVPKTAENF--LALCASGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            D VPKTA NF  LA  + G+ Y G++FHR I  FM Q             SI+G+KF DE    LKH    +LSMAN+GPNTNGSQFFI++   P L+G + VFG V+ GF+ L+L +K  +  G +P   I+I
Sbjct:   25 DVVPKTAANFRELATGSRGFGYKGSVFHRVITDFMAQGGDFTNFNGTGGKSIYGEKFADE-NFKLKHTKPALLSMANAGPNTNGSQFFITFVPCPWLDGKHVVFGEVVDGFDTLELFKKNSSQQG-KPKTTIKI 156          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.102e-21
Identity = 64/141 (45.39%), Postives = 79/141 (56.03%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G I  E+  D+ PKTAENF ALC        SG   ++ G+ FHR I  FM Q             SI+G KF DE  E  KH   GILSMAN+G NTNGSQFFI   K   L+G + VFG+V+ G +V+  +EK  + SG
Sbjct:   19 GKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFER-KHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSG 158          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.664e-21
Identity = 60/141 (42.55%), Postives = 80/141 (56.74%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G I  E+  +  PKTAENF ALC             ++ G+ FHR I  FM Q             SI+G+KF DE    LKH+  G+LSMAN+GPNTNGSQFF+++   P L+G + VFG V+ G E+L+ +E   + SG
Sbjct:   17 GRIVMELFDEVTPKTAENFRALCTGEKGVGKAGKPLHFKGSHFHRVITDFMAQGGDFTRGNGTGGESIYGEKFADE-NFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGKHVVFGEVVEGLEILEQLEANGSQSG 156          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20
Identity = 61/126 (48.41%), Postives = 72/126 (57.14%), Query Frame = 1
Query:   64 DEVPKTAENFLALC--ASGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD 429
            D VPKT ENF  L   A GY Y G+ FHR I  FMIQ             SI+G KF DE  + LKH   G+LSMAN+GPNTNGSQFFI     P L+  + VFG VI G +V+  +E  +T   D
Sbjct:  105 DAVPKTVENFKTLSTGAKGYGYQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFD-LKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVIEGLDVVKQLESQETSKLD 229          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIH_GIBZE (Peptidyl-prolyl cis-trans isomerase H OS=Gibberella zeae GN=CYP3 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 62/154 (40.26%), Postives = 82/154 (53.25%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASGY---------YDGTIFHRNIKGFMIQXXXXXXXXXXXXS-IWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTG--SGDRPLAEIRINR 459
            LG I  E+  D VPKTAENF   C             Y G+ FHR I  FM Q            + IWG K  ++   +LKH+  G+LSMAN+GPNTNGSQFFI+    P L+  + VFG+V  G +V+  ME  +TG    D P  ++ I++
Sbjct:   25 LGRITFELFKDVVPKTAENFRQFCTGESKTPVGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIWGFKSFEDENFTLKHDQPGLLSMANAGPNTNGSQFFITTVPTPFLDNKHVVFGKVFEGMDVVKKMEATKTGYRGKDMPNLDVVISQ 178          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 64/145 (44.14%), Postives = 83/145 (57.24%), Query Frame = 1
Query:   31 NLGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +LG I   +  + VPKT ENF AL     GY Y  + FHR IK FMIQ             SI+G++F DE    L+H   GILSMAN+G +TNGSQFFI+      L+G + VFG+VI G +V+  +E  +T  GDRP   + I
Sbjct:   42 DLGRIVLGLYGEVVPKTVENFRALATGEKGYGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFADE-NFKLRHTGPGILSMANAGRDTNGSQFFITTVTTSWLDGRHVVFGKVIEGMDVVTAIETTKTLPGDRPATPVII 185          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP7_SCHPO (Peptidylprolyl isomerase cyp7 OS=Schizosaccharomyces pombe GN=cyp7 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 52/121 (42.98%), Postives = 67/121 (55.37%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVI 375
            +V L T  GDI+ E+ C EVPK   NF+ LC  GYYDGTI HR +  F+IQ            SI+G+ F  E    L+   RG++ MA +    N SQFFI+    P  NG  T+FGRV+
Sbjct:   14 TVILKTTRGDIQIELWCKEVPKACRNFIQLCLEGYYDGTIVHRVVPEFLIQGGDPTGTGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVV 134          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP7_CAEEL (Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhabditis elegans GN=cyn-7 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 63/141 (44.68%), Postives = 81/141 (57.45%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G I  E+  D VPKTAENF ALC        SG   ++ G+ FHR I  FMIQ             SI+G+KF DE  +  KH   G+LSMAN+GPNTNGSQFF+   K   L+G + VFGRV+ G +++  +E   + SG
Sbjct:   18 GRIVMELYNDIVPKTAENFRALCTGEKGVGKSGKPLHFKGSKFHRIIPEFMIQGGDFTRGNGTGGESIYGEKFPDENFKE-KHTGPGVLSMANAGPNTNGSQFFLCTVKTAWLDGKHVVFGRVVEGLDIVSKVEGNGSSSG 157          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 63/141 (44.68%), Postives = 76/141 (53.90%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G +  E+  D VPKTAENF ALC             ++ G+ FHR I  FMIQ             SI+G KF DE    LKH   G LSMAN+GPNTNGSQFFI     P L+G + VFG+V  G  V+  +EK  + SG
Sbjct:   36 GRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDE-NFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHVVFGQVTDGMSVVKKIEKMGSRSG 175          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 61/141 (43.26%), Postives = 77/141 (54.61%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G I  E+  D+ P+TAENF ALC             ++ G+ FHR I  FM Q             SI+G KF DE  E  KH   GILSMAN+G NTNGSQFFI   K   L+G + VFG+V+ G +V+  +EK  + SG
Sbjct:   18 GRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFER-KHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSG 157          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPIA_PARPR5.102e-2146.27Peptidyl-prolyl cis-trans isomerase OS=Paramecium ... [more]
CP19B_ARATH5.102e-2145.39Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
PPI2_SYNY36.664e-2142.55Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
CYPB_VICFA1.137e-2048.41Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
PPIH_GIBZE1.485e-2040.26Peptidyl-prolyl cis-trans isomerase H OS=Gibberell... [more]
PPIB_ORPSP1.485e-2044.14Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]
CYP7_SCHPO1.485e-2042.98Peptidylprolyl isomerase cyp7 OS=Schizosaccharomyc... [more]
CYP7_CAEEL1.485e-2044.68Peptidyl-prolyl cis-trans isomerase 7 OS=Caenorhab... [more]
CYP1_CAEEL1.485e-2044.68Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]
CP18C_ARATH1.485e-2043.26Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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