CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_DICDI (Peptidyl-prolyl cis-trans isomerase A OS=Dictyostelium discoideum GN=ppiA PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 64/141 (45.39%), Postives = 76/141 (53.90%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA-------SGY---YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G +  E+  + VPKTAENF ALC        SG    Y G+ FHR I  FM Q             SI+G KF DE    LKH  +G LSMAN+G NTNGSQFFI  A    L+G + VFG V  G +V+  ME A + SG
Sbjct:   26 GKVVMELYANTVPKTAENFRALCTGEKGIGKSGKPLSYKGSSFHRVITNFMCQGGDFTMGNGTGGESIYGNKFADE-NFKLKHFGQGTLSMANAGANTNGSQFFICVAPTDWLDGKHVVFGFVTEGMDVVKKMEAAGSQSG 165          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PAL4B_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4B OS=Homo sapiens GN=PPIAL4B PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.800e-19
Identity = 61/130 (46.92%), Postives = 77/130 (59.23%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDE--IRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLME 405
            LG I  ++  D++ KTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF+DE  IR   KH   GILSMAN+GPNTNGSQFFI  AK   L+G +  FG+V     +++ ME
Sbjct:   17 LGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTRHNGTGDKSIYGEKFDDENLIR---KHTGSGILSMANAGPNTNGSQFFICAAKTEWLDGKHVAFGKVKERVNIVEAME 143          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIH_ASPOR (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19
Identity = 61/152 (40.13%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   31 NLGDIKCEIACDEVPKTAENFLALCASGY---------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGK-KFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +LG IK E+     P+TAENF   C             Y  + FHR IK FMIQ             +I+G  +F DE    LKH+  G+LSMANSGPNTNG QFFI+    P LN  + VFG+V+ G +V+ ++E  +T + D+P  ++ I
Sbjct:   26 SLGRIKMELFTSITPRTAENFRQFCTGESKSPQGRPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSRTIYGTPRFQDE-NFILKHDQPGLLSMANSGPNTNGCQFFITTTATPFLNNKHVVFGQVVEGMDVVRMIENTRT-TRDKPNQDVTI 175          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_TREPA (Probable peptidyl-prolyl cis-trans isomerase OS=Treponema pallidum GN=ppiB PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19
Identity = 55/132 (41.67%), Postives = 75/132 (56.82%), Query Frame = 1
Query:   22 LHTNLGDIKCEIACDEVPKTAENF-------LALCASG-YYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVL 393
            + TN G I   +  ++ P T  NF       LA+C    +Y G  FHR IK FMIQ               G +F DE   +L+H++ G+LSMAN+GP TNGSQFFI++   P L+G +TVFG+V+ G EV+
Sbjct:   44 METNRGTIVLSLFFEKAPLTVCNFVGLAEGTLAVCKGRPFYQGLTFHRVIKDFMIQGGDPQGNGTGGP---GYQFPDECDPALRHDSPGVLSMANAGPGTNGSQFFITHVATPWLDGKHTVFGKVVEGMEVV 172          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_HAEIN (Peptidyl-prolyl cis-trans isomerase B OS=Haemophilus influenzae GN=ppiB PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19
Identity = 64/170 (37.65%), Postives = 87/170 (51.18%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMA-NSGPNTNGSQFFISYAKQPHLNGL--------------YTVFGRVIHGFEVLDLMEKAQTGS----GDRPLAEIRINRVTI 468
            VTLHTN GDIK ++  D+ P TAENFL  C  G+Y+ TIFHR I GFMIQ            +       +E    L  N RG ++MA  S P++  +QFFI+ A    LN                Y VFG V+ G +V+D ++K +TG+     D P  ++ I  V+I
Sbjct:    2 VTLHTNFGDIKIKLDFDKAPVTAENFLNYCKDGFYNNTIFHRVIDGFMIQGGGMESGMREKAT--KAPIQNEANNRLS-NKRGTIAMARTSDPHSATAQFFINVADNDFLNYRSKEMFGREVVQEWGYAVFGEVVEGMDVVDKIKKVKTGNKGFHQDVPTEDVVITSVSI 168          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19
Identity = 61/141 (43.26%), Postives = 74/141 (52.48%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G I  E+  D  P+TAENF ALC             +Y G+ FHR I  FM Q             SI+G KF DE     KH   GILSMAN+G NTNGSQFFI   K   L+G + VFG+V+ G  V+  +EK  + SG
Sbjct:   19 GRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDE-NFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSG 158          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIH_MOUSE (Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus GN=Ppih PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.776e-19
Identity = 58/133 (43.61%), Postives = 76/133 (57.14%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASGY--------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLME 405
            +G +K E+  D VPKTAENF   C   +        Y G+ FHR IK FMIQ             SI+   F DE    L+H+A G+LSMANSGP+TNG QFFI+ +K   L+G + VFG++I G  V+  +E
Sbjct:   24 VGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADE-NFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIE 155          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CWC27_USTMA (Peptidyl-prolyl isomerase CWC27 OS=Ustilago maydis GN=CWC27 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.776e-19
Identity = 55/158 (34.81%), Postives = 81/158 (51.27%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHG---FEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            V L T+ G I   +   + P    NFL L   G+YD  +FHR I  F++Q            SI+G+ F  E    LK N RG+L MA +   TN SQFF++    P L G +T+ G+V  G   + +++L+E  +   GDRP   I+++ V +  NP
Sbjct:   15 VDLVTSKGTISIALFPTQAPLACRNFLTLALEGFYDNLVFHRLIPNFILQTGDPSATGTGGESIYGEPFPIESHSRLKFNRRGLLGMAANQDRTNESQFFLTLDATPELTGKHTLMGKV-EGKSIYTLVELVEGVELVDGDRPRYPIKLHEVRVVENP 171          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP2_CAEEL (Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhabditis elegans GN=cyn-2 PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.146e-19
Identity = 62/141 (43.97%), Postives = 78/141 (55.32%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            G I  E+  D VPKTAENF ALC        SG   ++ G+ FHR I  FMIQ             SI G+KF+DE  +  KH   G+LSMAN G NTNGSQFF+   K   L+G + VFG+VI G +V+  +E   +  G
Sbjct:   18 GRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGGDFTEGNGTGGESIHGEKFDDENFKE-KHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGKHVVFGKVIEGMDVVKAIESKGSEDG 157          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CP19D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Arabidopsis thaliana GN=CYP19-4 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.389e-18
Identity = 60/130 (46.15%), Postives = 74/130 (56.92%), Query Frame = 1
Query:   70 VPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            VPKTAENF ALC        SG   +Y G+ FHR I  FMIQ             SI+G+KF DE    LKH   G+LSMANSG +TNGSQFFI+      L+G + VFG+V+ G +V+  +E     SG
Sbjct:   57 VPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADE-NFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSG 185          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPIA_DICDI2.800e-1945.39Peptidyl-prolyl cis-trans isomerase A OS=Dictyoste... [more]
PAL4B_HUMAN2.800e-1946.92Peptidylprolyl cis-trans isomerase A-like 4B OS=Ho... [more]
PPIH_ASPOR3.657e-1940.13Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPIB_TREPA3.657e-1941.67Probable peptidyl-prolyl cis-trans isomerase OS=Tr... [more]
PPIB_HAEIN3.657e-1937.65Peptidyl-prolyl cis-trans isomerase B OS=Haemophil... [more]
CP19A_ARATH3.657e-1943.26Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
PPIH_MOUSE4.776e-1943.61Peptidyl-prolyl cis-trans isomerase H OS=Mus muscu... [more]
CWC27_USTMA4.776e-1934.81Peptidyl-prolyl isomerase CWC27 OS=Ustilago maydis... [more]
CYP2_CAEEL8.146e-1943.97Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhab... [more]
CP19D_ARATH1.389e-1846.15Peptidyl-prolyl cis-trans isomerase CYP19-4 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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