CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL4_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Cryptococcus neoformans GN=CYP6 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.815e-18
Identity = 64/173 (36.99%), Postives = 83/173 (47.98%), Query Frame = 1
Query:   10 MSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWG-------------KKFNDEIRESLKHNARGILSMANS--GPNTNGSQFFISYAKQ-PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            MSV L T+LGD+  ++  D+ P+T ENF+ LC   YY    F    K F+ Q            S+               + F  EI  SLKH  +G LSMA +   P   GSQFFI+ A    +L+G + VFG VI G + LD +  A T    RPL  IRI  V I  +P
Sbjct:    1 MSVMLETSLGDLIIDLEVDKCPRTCENFIKLCKLKYYALNAFFNVSKNFIAQSGDPTATGTGGESLASYVYSQSPSGPRPPRYFTPEILNSLKHTHKGTLSMAVAPINPPGCGSQFFITLADNIDYLDGKHAVFGHVIEGLDTLDKINDAFTDKEGRPLQNIRIRHVEILEDP 173          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_STRCH (Peptidyl-prolyl cis-trans isomerase B OS=Streptomyces chrysomallus GN=cypB PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.043e-18
Identity = 61/172 (35.47%), Postives = 82/172 (47.67%), Query Frame = 1
Query:    7 KMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASG---------------YYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVI--HGFEVLDLMEKAQTG-SGDRPLAEIRINRVTI 468
            ++  TL TN GDI+  +  +  PKT  NF+ L                    YDGT+FHR I GFMIQ               G KF DE    L      +L+MAN+GP TNGSQFF++ +    L G +T+FG V    G +V+D +    T    DRPL ++ I  V +
Sbjct:    4 QLYATLKTNRGDIEIRLLPNHAPKTVRNFVELATGQREWVNPETGEKSTDRLYDGTVFHRVISGFMIQGGDPLGNGTGGP---GYKFADEFHPELGFTQPYLLAMANAGPGTNGSQFFLTVSPTAWLTGKHTIFGEVSGEAGRKVVDAIAATPTNPRTDRPLEDVVIESVVV 172          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_ECHGR (Peptidyl-prolyl cis-trans isomerase OS=Echinococcus granulosus GN=CYP-1 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.280e-18
Identity = 59/125 (47.20%), Postives = 73/125 (58.40%), Query Frame = 1
Query:   64 DEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            D+VPKT ENF ALC    G+ Y G+ FHR I GFM Q             SI+G KF DE   + KH+   +LSMAN+G NTNGSQFFI+ A    L+G + VFG V  G +V+  ME   + SG
Sbjct:   25 DDVPKTVENFRALCTGEKGFGYKGSKFHRIIPGFMCQGGDFTAGNGTGGKSIYGSKFEDE-NFNHKHSKPMMLSMANAGKNTNGSQFFITTAVTSWLDGKHVVFGEVESGEDVVKDMEAVGSSSG 148          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL4_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo sapiens GN=PPIL4 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.536e-17
Identity = 51/165 (30.91%), Postives = 84/165 (50.91%), Query Frame = 1
Query:   10 MSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIR-------ESLKHNARGILSMANSGPNTNGSQFFISYAKQ-PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            M+V L T LGD+  ++  +E P+   NFL LC   YY+  + H   + F+IQ            SI+G+ + D+           +KH  +G +SM N+G + +GSQF I+  +   +L+G++TVFG V  G +++  + +        P  +IRIN   I  +P
Sbjct:    1 MAVLLETTLGDVVIDLYTEERPRACLNFLKLCKIKYYNYCLIHNVQRDFIIQTGDPTGTGRGGESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIIKKINETFVDKDFVPYQDIRINHTVILDDP 165          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL4_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus musculus GN=Ppil4 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 51/165 (30.91%), Postives = 84/165 (50.91%), Query Frame = 1
Query:   10 MSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIR-------ESLKHNARGILSMANSGPNTNGSQFFISYAKQ-PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            M+V L T LGD+  ++  +E P+   NFL LC   YY+  + H   + F+IQ            SI+G+ + D+           +KH  +G +SM N+G + +GSQF I+  +   +L+G++TVFG V  G +++  + +        P  +IRIN   I  +P
Sbjct:    1 MAVLLETTLGDVVIDLYTEERPRACLNFLKLCKIKYYNYCLIHNVQRDFIIQTGDPTGTGRGGESIFGQLYGDQASFFEAEKVPRIKHKKKGTVSMVNNGSDQHGSQFLITTGENLDYLDGVHTVFGEVTEGMDIVKKINETFVDKDFVPYQDIRINHTVILDDP 165          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIH_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizosaccharomyces pombe GN=cyp3 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 55/151 (36.42%), Postives = 79/151 (52.32%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS----------GYYDGTIFHRNIKGFMIQXXXXXXXXXXXXS-IWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            LG IK  +    VPKTAENF   C            GY + T FHR I+GFMIQ            + I+  +   +   +LKH+  G+LSMAN+G ++NG QFFI+      L+G + VFG VI G++++  +E    G+  RP + + I
Sbjct:   18 LGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNST-FHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAI 167          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_NEOCA (Peptidyl-prolyl cis-trans isomerase OS=Neospora caninum PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.006e-17
Identity = 58/134 (43.28%), Postives = 76/134 (56.72%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRP 435
            G I  E+  D VPKT +NF+ L     Y G+ FHR I  FMIQ             SI+G +F DE   +LKH+ RG++SMAN+GPNTNGSQFFI+  K   L+G + VFG++ +         +A   SG RP
Sbjct:   37 GRIVLELRGDVVPKTVKNFIGLFDK--YKGSTFHRVIADFMIQGGDFENHNGTGGHSIYGPRFEDE-NFTLKHD-RGVISMANAGPNTNGSQFFITTVKTEWLDGRHVVFGKITNDSWPTVQAIEALGSSGGRP 166          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL6_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo sapiens GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.620e-17
Identity = 58/162 (35.80%), Postives = 83/162 (51.23%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 486
            +G +  E+ CD  PKT +NF  LC             +Y  +IFHR ++   IQ             SI+G  F DE   S+ HN RG+L MAN G ++NGSQF+I+    P+L+  +  FG++I G EVL  +E   T   +RP   I + R+T   +P A
Sbjct:  155 IGRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDE-NFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQLIEGTEVLKQLELVPT-QNERP---IHMCRITDSGDPYA 311          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPD_YEAST (Peptidyl-prolyl cis-trans isomerase D OS=Saccharomyces cerevisiae GN=CPR5 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 57/133 (42.86%), Postives = 74/133 (55.64%), Query Frame = 1
Query:   73 PKTAENFLALCAS-----GYYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            P+T ENF  L  S     GY + +IFHR I  FMIQ             SI+G  F DE    +KH+  G LSMAN G NTNGSQFFI+    P L+G + VFG V+ G +V+  +E  +T S + P+ E+ I
Sbjct:   60 PQTVENFYQLTISRDPKMGYLN-SIFHRVIPNFMIQGGDFTHRSGIGGKSIFGNTFKDE-NFDVKHDKPGRLSMANRGKNTNGSQFFITTVPCPWLDGKHVVFGEVLDGMDVVHYIENVKTDSRNMPVKEVII 190          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CP20A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana GN=CYP20-1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.470e-17
Identity = 55/130 (42.31%), Postives = 70/130 (53.85%), Query Frame = 1
Query:   70 VPKTAENFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            VPKT ENF ALC             +Y G+ FHR I  FM+Q             SI+G+KF DE    LKH   G LSMAN+G +TNGSQFFI+      L+G + VFG+V+ G +V+  +E     SG
Sbjct:   60 VPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADE-NFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSG 188          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPIL4_CRYNE1.815e-1836.99Peptidyl-prolyl cis-trans isomerase-like 4 OS=Cryp... [more]
PPIB_STRCH4.043e-1835.47Peptidyl-prolyl cis-trans isomerase B OS=Streptomy... [more]
PPIA_ECHGR5.280e-1847.20Peptidyl-prolyl cis-trans isomerase OS=Echinococcu... [more]
PPIL4_HUMAN1.536e-1730.91Peptidyl-prolyl cis-trans isomerase-like 4 OS=Homo... [more]
PPIL4_MOUSE2.006e-1730.91Peptidyl-prolyl cis-trans isomerase-like 4 OS=Mus ... [more]
PPIH_SCHPO2.006e-1736.42Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizo... [more]
PPIA_NEOCA2.006e-1743.28Peptidyl-prolyl cis-trans isomerase OS=Neospora ca... [more]
PPIL6_HUMAN2.620e-1735.80Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo... [more]
CYPD_YEAST4.470e-1742.86Peptidyl-prolyl cis-trans isomerase D OS=Saccharom... [more]
CP20A_ARATH4.470e-1742.31Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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