CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL4_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Aspergillus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.958e-17
Identity = 60/175 (34.29%), Postives = 84/175 (48.00%), Query Frame = 1
Query:   10 MSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQ----XXXXXXXXXXXXSIWG-------KKFNDEIRESLKHNARGILSMA------NSGPNTNGSQFFISYAKQ-PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            MSV L T+LGDI  ++  DE PK  ENFL LC   YY+ +  H   K F  Q                SIWG       + F+ E    LKH+ RG +SMA      +       SQF ++  +   +L+G   +FG+V+ GF+VL+ + +A      RPL +IRI    I  +P
Sbjct:    1 MSVLLETSLGDIVIDLLVDECPKACENFLKLCKVKYYNFSPVHSVQKNFTFQTGDPLGPDSSESDGGSSIWGLLEGPPKRTFSLEPPPKLKHDERGTVSMATVPSPHDPDQRIAASQFIVTLGENLDYLDGKAVIFGKVVEGFDVLEKVNEAFIDDRGRPLKDIRIRHTVILDDP 175          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_SCHMA (Peptidyl-prolyl cis-trans isomerase OS=Schistosoma mansoni PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.958e-17
Identity = 55/125 (44.00%), Postives = 70/125 (56.00%), Query Frame = 1
Query:   64 DEVPKTAENFLALCASGY---YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            ++VP T  NF  LC       Y G++FHR I GFM Q             SI+G KF DE   + KH A   LSMAN+GPNTNGSQFFI+      L+G + VFG+V+ G +V+  ME   + SG
Sbjct:   25 NDVPDTTRNFRELCTHKNNFGYKGSVFHRIIPGFMCQGGDFTNGDGTGGKSIYGNKFKDE-NFNHKHEAFS-LSMANAGPNTNGSQFFITTVPCSWLDGKHVVFGKVVSGIDVVKKMESLGSTSG 147          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_STRCH (Peptidyl-prolyl cis-trans isomerase A OS=Streptomyces chrysomallus GN=ppiA PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.301e-16
Identity = 56/116 (48.28%), Postives = 68/116 (58.62%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRV 372
            G I   +  D VPKTAENF AL     G+ Y G+ FHR I  FM+Q             SI+G+KF DE    LKH+  G+LSMAN+G NTNGSQFFI+    P L+G + VFG V
Sbjct:   17 GRITFNLFDDVVPKTAENFRALATGEKGFGYAGSSFHRVITDFMLQGGDFTRGDGTGGKSIYGEKFADE-NFQLKHDRVGLLSMANAGKNTNGSQFFITTVLTPWLDGKHVVFGEV 131          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CWC27_ASPFU (Peptidyl-prolyl isomerase cwc27 OS=Aspergillus fumigatus GN=cwc27 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.301e-16
Identity = 55/166 (33.13%), Postives = 78/166 (46.99%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKK----------------FNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAK-QPHLNGLYTVFGRVIHG--FEVLDLMEKAQTGSGDRPLAEIRI 453
            S TLHT  G I   +  ++ P T +NFL  C   YY GTIFHR +  F++Q            SI+                     DE+   L+ N RG++ MA S   T GSQFFI+ A  +  LNG  T+FGRV     + VL + E  +    +RP+  +++
Sbjct:   14 SATLHTTFGPIHIALFANQTPLTCKNFLQHCLDNYYAGTIFHRIVPDFIVQGGDPTGTGSGGTSIYEYPEFEYDPEARDPNEKVVLRDELHSRLRFNRRGLVGMAKSEDGTYGSQFFITLANAERELNGQCTLFGRVEGDSIYNVLKIAEAERVERTERPVYPVKV 179          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_HELPY (Peptidyl-prolyl cis-trans isomerase OS=Helicobacter pylori GN=ppiA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.218e-16
Identity = 46/132 (34.85%), Postives = 72/132 (54.55%), Query Frame = 1
Query:   19 TLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRV--IHGFEVLDLMEK 408
            T+ TN G+I  E+   + P+   NF+ L   G+Y+G  FHR I GF+ Q               G +   E+  +   + RG +SMA++G +T GSQFF+ +   PHL+G +TVFG++    G  VLD +++
Sbjct:   22 TIKTNKGNIALELFYKDAPQAVSNFVTLAKEGFYNGLNFHRVIAGFVAQGGCPYGTGTGGP---GHRIKCEVAHNPNKHKRGSISMAHAGRDTGGSQFFLCFVDLPHLDGEHTVFGKITSAEGLSVLDKIKQ 150          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPH_NEUCR (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Neurospora crassa GN=NCU00726 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.897e-16
Identity = 57/136 (41.91%), Postives = 75/136 (55.15%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA--SGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVI--HGFEVLDLMEKAQTGSG 426
            G I   +  D VPKTA NF  LC   +G+ Y G+ FHR I  FM+Q             SI+G+KF DE   + KH   G+LSMAN+GPNTNGSQFF++      L+G + VFG V      +V+  +E   + SG
Sbjct:   73 GRINFTLYDDVVPKTARNFKELCTGQNGFGYKGSSFHRIIPEFMLQGGDFTRGNGTGGKSIYGEKFADE-NFAKKHVRPGLLSMANAGPNTNGSQFFVTTVPTSWLDGRHVVFGEVADDESMKVVKALEATGSSSG 207          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.784e-16
Identity = 56/135 (41.48%), Postives = 74/135 (54.81%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG I  E+  + VP+TAENF ALC    G+ +  +IFHR +  F+ Q             SI+G KF+DE    LKH   G+LSMAN G NTN SQFFI+  K  HL+  + VFG V  G + +  +E   +  G
Sbjct: 2906 LGRIIMELFSNIVPQTAENFRALCTGEKGFGFKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGDKFDDE-NFDLKHTGPGLLSMANYGQNTNSSQFFITLKKAEHLDFKHVVFGFVKDGMDTVRKIESFGSPKG 3039          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_ECOLI (Peptidyl-prolyl cis-trans isomerase B OS=Escherichia coli (strain K12) GN=ppiB PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 3.784e-16
Identity = 58/164 (35.37%), Postives = 81/164 (49.39%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANS-GPNTNGSQFFISYAKQPHLNGL--------YTVFGRVIHGFEVLDLMEKAQTGSG----DRPLAEIRINRVTI 468
            VT HTN GDI  +   D+ P+T +NFL  C  G+Y+ TIFHR I GFMIQ            +   +   +E    LK N RG L+MA +  P++  +QFFI+      LN          Y VF  V+ G +V+D ++   TG      D P  ++ I  VT+
Sbjct:    2 VTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKAT--KEPIKNEANNGLK-NTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTV 162          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL6_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos taurus GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.942e-16
Identity = 53/146 (36.30%), Postives = 77/146 (52.74%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPL 438
            +G +  E+  D  PKT +NF  LC        SG   +Y G+IFHR ++   +Q             SI+G  F DE   S+ HN RG+L M N G ++NGSQF+I+    P+L+  Y  FG++I G +VL  +E   T   +RP+
Sbjct:  151 IGRLIFELYSDTCPKTCKNFQILCTGKAGFSQSGIKLHYTGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDE-NFSVPHNKRGVLGMVNKGRHSNGSQFYITLQAAPYLDKKYVAFGQLIEGTDVLHHLESVPT-ENERPI 294          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL4_ASPFU (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Aspergillus fumigatus GN=cyp6 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.942e-16
Identity = 59/175 (33.71%), Postives = 82/175 (46.86%), Query Frame = 1
Query:   10 MSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQ----XXXXXXXXXXXXSIWG-------KKFNDEIRESLKHNARGILSMA------NSGPNTNGSQFFISYAKQ-PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            MSV L T+LGDI  ++  DE PK  ENFL LC   YY+ +  H   K F  Q                SIWG       + F+ ++   LKH  RG +SMA      +       SQF ++      +L+G   +FG+V+ GF+VL+ +  A      RPL +IRI    I  +P
Sbjct:    1 MSVLLETSLGDIVIDLLVDESPKACENFLKLCKVKYYNFSPVHSVQKNFTFQTGDPLGPDSPESDGGSSIWGLLEGPVKRTFSLKLSPKLKHTERGTVSMATVPSSHDPDERLAASQFIVTLEDNLDYLDGKAAIFGKVVEGFDVLEKINGAFIDDQGRPLKDIRIRHTVILDDP 175          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPIL4_ASPOR9.958e-1734.29Peptidyl-prolyl cis-trans isomerase-like 4 OS=Aspe... [more]
PPIA_SCHMA9.958e-1744.00Peptidyl-prolyl cis-trans isomerase OS=Schistosoma... [more]
PPIA_STRCH1.301e-1648.28Peptidyl-prolyl cis-trans isomerase A OS=Streptomy... [more]
CWC27_ASPFU1.301e-1633.13Peptidyl-prolyl isomerase cwc27 OS=Aspergillus fum... [more]
PPIA_HELPY2.218e-1634.85Peptidyl-prolyl cis-trans isomerase OS=Helicobacte... [more]
CYPH_NEUCR2.897e-1641.91Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
RBP2_MOUSE3.784e-1641.48E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=R... [more]
PPIB_ECOLI3.784e-1635.37Peptidyl-prolyl cis-trans isomerase B OS=Escherich... [more]
PPIL6_BOVIN4.942e-1636.30Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos ... [more]
PPIL4_ASPFU4.942e-1633.71Peptidyl-prolyl cis-trans isomerase-like 4 OS=Aspe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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