CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL4_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Neurospora crassa GN=cyp-6 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.430e-16
Identity = 61/176 (34.66%), Postives = 80/176 (45.45%), Query Frame = 1
Query:   10 MSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQ----XXXXXXXXXXXXSIWG--------KKFNDEIRESLKHNARGILSMAN----SGPNTN--GSQFFISYA-KQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 480
            MSV L T+ GDI  ++  D  PK  ENFL LC   YY+ +  H   K F  Q                SIWG        K F       LKH  RG +SMA     S P+T   GSQF ++      +L+G   +FG+V+ GF+VL+ +  A       PL +IRI    I  +P
Sbjct:    1 MSVLLETSAGDIVIDLLVDYAPKMCENFLKLCKVKYYNFSPIHSIQKSFSFQTGDPLGPLSSESDGGQSIWGLLSGDPSEKTFPALFHPKLKHLERGTVSMATVPHPSDPDTRLAGSQFIVTLGDNTDYLDGKAAIFGKVVEGFDVLEKINDAIVDERGHPLVDIRIKHTVILDDP 176          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL4_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 4 OS=Gibberella zeae GN=CYP6 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.430e-16
Identity = 62/178 (34.83%), Postives = 80/178 (44.94%), Query Frame = 1
Query:   10 MSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQ----XXXXXXXXXXXXSIWG--------KKFNDEIRESLKHNARGILSMA----NSGPNTN--GSQFFISYAKQ-PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 486
            MSV L T+ GDI  ++  D  PK  ENFL LC   YY+ +  H   K F  Q                SIWG        + F       LKH  RG +SMA     S P+    GSQF I+  +    L+G   +FG+V+ GFE LD + +A       PL +IRI    I  +P A
Sbjct:    1 MSVLLETSAGDIVIDLLVDHAPKLCENFLKLCKVKYYNFSPVHSVQKNFSFQTGDPLGPLSKDSDGGSSIWGHLSGDPSERTFPAFFHPKLKHLERGTVSMATAPLQSDPDVRVAGSQFIITLGQDTDFLDGKAAIFGKVVEGFEALDKINEAIVDEKGHPLIDIRIKHTVILDDPYA 178          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_HELPJ (Peptidyl-prolyl cis-trans isomerase OS=Helicobacter pylori J99 GN=ppiA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.430e-16
Identity = 45/134 (33.58%), Postives = 72/134 (53.73%), Query Frame = 1
Query:   19 TLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTG 420
            T+ TN G+I  E+   + P+   NF+ L   G+Y+G  FHR I GF+ Q                 +   E+  +   + RG +SMA++G +T GSQFF+ +   PHL+G +TVFG++    E L +++K + G
Sbjct:   21 TIKTNKGNITLELFYKDAPQAVSNFVTLAKEGFYNGLNFHRVIAGFVAQGGCPYGTGTGGPE---HRIKCEVAHNPNKHQRGSISMAHAGRDTGGSQFFLCFVDLPHLDGEHTVFGKITSA-ESLSVLDKIKQG 150          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPR_CALVI (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Calliphora vicina GN=NINAA PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.430e-16
Identity = 53/145 (36.55%), Postives = 74/145 (51.03%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASGY----YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            LG I   +     PKT  NF  +C  G     Y G+ FHR I  F+IQ             SI+G  F DE  + ++H   G L MAN GP+TNG QF+++      LNG +TVFG+VI G + +  +E  +T + D P+  + I
Sbjct:   39 LGRIVFGLFGKRAPKTVTNFRHICLRGINGTTYVGSEFHRVISRFLIQGGDIVNNDGTGSTSIYGDFFQDEALD-VEHLRPGYLGMANRGPDTNGCQFYVTTVAAQWLNGKHTVFGKVIEGMDTVYAIEDVKTDTDDHPIDPVII 182          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPB_YEAST (Peptidyl-prolyl cis-trans isomerase B OS=Saccharomyces cerevisiae GN=CPR2 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.430e-16
Identity = 51/133 (38.35%), Postives = 77/133 (57.89%), Query Frame = 1
Query:   73 PKTAENFLALCASGY----YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPH-LNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            PKTA+NF  L  +      + G+ FHR I  FM+Q             SI+G  F DE   +LKH+ +G LSMAN G +TNGSQFFI+  ++   L+G + VFG+V+ G +V++ ++     + D+PL  ++I
Sbjct:   62 PKTAKNFYKLSTTTNSKKGFIGSTFHRVIPNFMVQGGDFTDGTGVGGKSIYGDTFPDE-NFTLKHDRKGRLSMANRGKDTNGSQFFITTTEEASWLDGKHVVFGQVVDGMDVVNYIQHVSRDANDKPLEAVKI 193          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.101e-15
Identity = 55/135 (40.74%), Postives = 72/135 (53.33%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG I  E+  + VP+TAENF ALC    G+ +  +IFHR I  F+ Q             SI+G KF DE    +KH   G+LSMAN G NTN SQF I+  K  HL+  + VFG V  G + +  +E   +  G
Sbjct: 3077 LGRITMELFSNIVPRTAENFRALCTGEKGFGFKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDE-NFDVKHTGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKG 3210          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI_SYNE7 (Peptidyl-prolyl cis-trans isomerase OS=Synechococcus elongatus (strain PCC 7942) GN=rot PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.453e-15
Identity = 47/116 (40.52%), Postives = 63/116 (54.31%), Query Frame = 1
Query:   22 LHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGR 369
            L T  G I+ +   ++ P T  NF+ L   G+YDG  FHR I GFM Q               G K   EI ++   +  G LSMA++G NT GSQFFI +  QPHL+G++T FG+
Sbjct:    6 LETEKGTIRLQFFDNDAPNTVANFVKLSQDGFYDGLTFHRVIPGFMSQGGCPHGTGTGGP---GYKIPCEINDN--PHLAGTLSMAHAGRNTGGSQFFICHEPQPHLDGVHTTFGQ 116          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CWC27_EMENI (Peptidyl-prolyl isomerase cwc27 OS=Emericella nidulans GN=cwc27 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.453e-15
Identity = 55/167 (32.93%), Postives = 77/167 (46.11%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKK----------------FNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAK-QPHLNGLYTVFGRVIHG---FEVLDLMEKAQTGSGDRPLAEIRI 453
            S TLHT  G +   +   + P T  NFL  C   YY GTIFHR +  F+IQ            SI+                     DEI   L+ N RG++ MA S   + GSQFFI+ A  +  LNG  T+FGR + G   + +L + E  +    +RP+  ++I
Sbjct:   14 SATLHTTFGPLHIALFAKQTPLTCRNFLQHCMDNYYAGTIFHRVVPDFIIQGGDPTGTGSGGTSIYEYPEFEYDPDARDPNEKVVLRDEIHSRLRFNRRGLVGMAKSEDGSYGSQFFITLANTERELNGQCTLFGR-LEGDSLYNMLKIAEAERIEGTERPVYPVKI 179          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: RBP2_BOVIN (E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos taurus GN=RANBP2 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.203e-15
Identity = 55/135 (40.74%), Postives = 72/135 (53.33%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG I  E+  + VPKTAENF ALC    G+ +  +IFHR I  F+ Q             SI+G KF DE    +KH   G+LSMAN G +TN SQFFI+  K   L+  + VFG V  G + +  +E   +  G
Sbjct:  938 LGRITMELFSNIVPKTAENFRALCTGEKGFGFKSSIFHRVIPDFVCQGGDITKHDGTGGRSIYGDKFEDE-NFDVKHTGPGLLSMANRGQDTNNSQFFITLKKAERLDFKHVVFGFVKDGMDTVKKIESFGSPKG 1071          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYPR_DROME (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Drosophila melanogaster GN=ninaA PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.184e-15
Identity = 47/134 (35.07%), Postives = 73/134 (54.48%), Query Frame = 1
Query:   73 PKTAENFLALCASGY----YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRE-SLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRIN 456
            PKT  NF  +C  G     Y G+ FHR +  F++Q             SI+G  F DE +  +++HN  G L MAN GP+TNG QF+++      L+G +TVFG+V+ G + +  +E  +T + D P+  + I+
Sbjct:   53 PKTVANFRHICLRGINGTSYVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVIS 186          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPIL4_NEUCR8.430e-1634.66Peptidyl-prolyl cis-trans isomerase-like 4 OS=Neur... [more]
PPIL4_GIBZE8.430e-1634.83Peptidyl-prolyl cis-trans isomerase-like 4 OS=Gibb... [more]
PPIA_HELPJ8.430e-1633.58Peptidyl-prolyl cis-trans isomerase OS=Helicobacte... [more]
CYPR_CALVI8.430e-1636.55Peptidyl-prolyl cis-trans isomerase, rhodopsin-spe... [more]
CYPB_YEAST8.430e-1638.35Peptidyl-prolyl cis-trans isomerase B OS=Saccharom... [more]
RBP2_HUMAN1.101e-1540.74E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=R... [more]
PPI_SYNE72.453e-1540.52Peptidyl-prolyl cis-trans isomerase OS=Synechococc... [more]
CWC27_EMENI2.453e-1532.93Peptidyl-prolyl isomerase cwc27 OS=Emericella nidu... [more]
RBP2_BOVIN3.203e-1540.74E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos ta... [more]
CYPR_DROME4.184e-1535.07Peptidyl-prolyl cis-trans isomerase, rhodopsin-spe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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