CN185473
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_MYCTU (Probable peptidyl-prolyl cis-trans isomerase B OS=Mycobacterium tuberculosis GN=ppiB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.645e-12 Identity = 54/170 (31.76%), Postives = 81/170 (47.65%), Query Frame = 1 Query: 7 KMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDE------------IRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRV-IHGFEVLDLMEKAQTGSG---DRPLAEIRINRVTI 468 ++SV++ TN G+I +A +E P T +F++L G++ GT HR M+ G +F +E + E + + RG L+MAN+GPNTN SQFF+ Y + L YTVFG + G LD + KA G +P E+ I V + Sbjct: 140 QVSVSMVTNQGNIGLMLANNESPCTVNSFVSLAQQGFFKGTTCHRLTTSPMLAVLQCGDPKGDGTGGPGYQFANEYPTDQYSANDPKLNEPVIY-PRGTLAMANAGPNTNSSQFFMVY-RDSKLPPQYTVFGTIQADGLTTLDKIAKAGVAGGGEDGKPATEVTITSVLL 307
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_DICD3 (Peptidyl-prolyl cis-trans isomerase A OS=Dickeya dadantii (strain 3937) GN=rotA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.806e-11 Identity = 48/140 (34.29%), Postives = 70/140 (50.00%), Query Frame = 1 Query: 16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNG-SQFFISYAKQPHLNG-----LYTVFGRVIHGFEVLDLMEKAQT 417 V L T+ G+I+ + + P +NF+ SG+Y+GTIFHR I GFM+Q + +E L+ N RG +SMA + + SQFFI+ A L+ Y VFG+V+ G EV D + + QT Sbjct: 30 VLLTTSAGNIELALDDQKAPVFVKNFVDYVNSGFYNGTIFHRVIPGFMVQGGGFSSDMKQKAT--NPPVKNEADNGLR-NLRGTISMARTSEKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMEVADKISQVQT 166
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_SALTY (Peptidyl-prolyl cis-trans isomerase A OS=Salmonella typhimurium GN=ppiA PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.665e-11 Identity = 48/148 (32.43%), Postives = 73/148 (49.32%), Query Frame = 1 Query: 1 RGKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKH---NARGILSMANSGPNTNG-SQFFISYAKQPHLNG-----LYTVFGRVIHGFEVLDLMEKAQT 417 +G V L T+ G+I+ E+ + P + +NF+ SG+Y+ T FHR I GFMIQ + KK N I+ + N RG ++MA + + SQFFI+ A L+ Y VFG+V+ G +V D + + T Sbjct: 26 KGDPHVLLTTSAGNIELELNSQKAPVSVKNFVDYVNSGFYNNTTFHRVIPGFMIQ------GGGFNEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPT 167
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_ECOLI (Peptidyl-prolyl cis-trans isomerase A OS=Escherichia coli (strain K12) GN=ppiA PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.787e-11 Identity = 48/148 (32.43%), Postives = 73/148 (49.32%), Query Frame = 1 Query: 1 RGKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKH---NARGILSMANSGPNTNG-SQFFISYAKQPHLNG-----LYTVFGRVIHGFEVLDLMEKAQT 417 +G V L T+ G+I+ E+ + P + +NF+ SG+Y+ T FHR I GFMIQ + KK N I+ + N RG ++MA + + SQFFI+ A L+ Y VFG+V+ G +V D + + T Sbjct: 26 KGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQ------GGGFTEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPT 167
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_ECOL6 (Peptidyl-prolyl cis-trans isomerase A OS=Escherichia coli O6 GN=ppiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.787e-11 Identity = 48/148 (32.43%), Postives = 73/148 (49.32%), Query Frame = 1 Query: 1 RGKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKH---NARGILSMANSGPNTNG-SQFFISYAKQPHLNG-----LYTVFGRVIHGFEVLDLMEKAQT 417 +G V L T+ G+I+ E+ + P + +NF+ SG+Y+ T FHR I GFMIQ + KK N I+ + N RG ++MA + + SQFFI+ A L+ Y VFG+V+ G +V D + + T Sbjct: 26 KGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQ------GGGFTEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPT 167
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_ECO57 (Peptidyl-prolyl cis-trans isomerase A OS=Escherichia coli O157:H7 GN=ppiA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.787e-11 Identity = 48/148 (32.43%), Postives = 73/148 (49.32%), Query Frame = 1 Query: 1 RGKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKH---NARGILSMANSGPNTNG-SQFFISYAKQPHLNG-----LYTVFGRVIHGFEVLDLMEKAQT 417 +G V L T+ G+I+ E+ + P + +NF+ SG+Y+ T FHR I GFMIQ + KK N I+ + N RG ++MA + + SQFFI+ A L+ Y VFG+V+ G +V D + + T Sbjct: 26 KGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQ------GGGFTEQMQQKKPNPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPT 167
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CP21C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP21-3, mitochondrial OS=Arabidopsis thaliana GN=CYP21-3 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11 Identity = 46/150 (30.67%), Postives = 68/150 (45.33%), Query Frame = 1 Query: 19 TLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468 TL T G + E+ D P + F+ C GY+ G +F R +K F+IQ +K I SLKH ++ + G +FFI A+ LN TVFGRV G +V+ +E+ +T +P + I I VT+ Sbjct: 81 TLDTGKGSVTIELFKDTAPNVVDQFMKFCQDGYFKGFLFSRVVKHFVIQAGDSAEFDAVKDWALDRK---NIDTSLKHE-EFMVGTPKAKNEQGGFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIEEVETDDQYQPKSPIEIMSVTL 226 The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 267
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bpback to top |