CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP9_SCHPO (Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosaccharomyces pombe GN=cyp9 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.164e-31
Identity = 70/155 (45.16%), Postives = 93/155 (60.00%), Query Frame = 1
Query:    4 GKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            GK ++ +HT  GDI  ++  +E PK  +NF     +GYYD TIFHR IK FMIQ            SIW K F DEI  +LKH+    +SMANSGPNTNGSQFFI+    P L+G +T+F R   G +V+  +E+ +T   DRPL   +I  ++I
Sbjct:  454 GKAAI-IHTTQGDISIKLYPEEAPKAVQNFTTHAENGYYDNTIFHRIIKNFMIQGGDPLGDGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIEQGETDKYDRPLEPTKIINISI 607          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP4_CAEEL (Peptidyl-prolyl cis-trans isomerase 4 OS=Caenorhabditis elegans GN=cyn-4 PE=2 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 5.439e-31
Identity = 67/156 (42.95%), Postives = 93/156 (59.62%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG-DRPLAEIRINRVTIHANP 480
            V L TN G +  E+   +VPK  ENF+  C++GYY+ T FHR IK FM+Q            SIW K F+DE      H+ARG+LSMAN G NTNGSQFFI++    +L+  +T+FGR++ G + L  +EK +T  G D P+  + I R  +  +P
Sbjct:  282 VRLVTNFGPLNLELFAPKVPKACENFITHCSNGYYNNTKFHRLIKNFMLQGGDPTGTGHGGESIWDKPFSDEFISGFSHDARGVLSMANKGSNTNGSQFFITFRPCKYLDRKHTIFGRLVGGQDTLTTIEKLETEEGTDVPMVSVVIMRAEVFVDP 437          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL3_EMENI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Emericella nidulans GN=cyp10 PE=3 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.604e-30
Identity = 88/210 (41.90%), Postives = 110/210 (52.38%), Query Frame = 1
Query:   10 MSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQ-----------------XXXXXXXXXXXXSIW-GKKFNDEIR-ESLKHNARGILSMAN--------------SGPNTNGSQFFISYAKQPHLNGLYTVFGRVIH------GFEVLDLMEKAQTGSG------------DRPLAEIRINRVTIHANPLA 486
            MSVTLHT  GD+K E+ C+ VPKTAENF+ALCA+G Y+ T FHR I GFMIQ                             SI+     N EI   +L+HN RGILSMA+              +GP  NGSQFFI++A  PHL+G  TVFG+V++      G +VL  +EKA   +             +     +RINRVTIHANP A
Sbjct:    1 MSVTLHTTHGDLKVELFCEAVPKTAENFIALCAAGAYNDTPFHRLIPGFMIQGGDISLGPAANSQGTTPMLPFDDIPKGGTSIYHPSALNQEIHLPALRHNTRGILSMASRPVKNQTAPGSQGATGPTINGSQFFITFAAAPHLDGSSTVFGKVLNLTAEDEGGDVLSKLEKANVKTDKKGKVVQPKENEETEYETLRINRVTIHANPFA 210          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL2_EMENI (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emericella nidulans GN=cyp8 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.013e-30
Identity = 73/158 (46.20%), Postives = 88/158 (55.70%), Query Frame = 1
Query:   22 LHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIH----GFEVLDLMEKAQTG-SGDRPLAEIRINRVTIHANP 480
            + T  GDI  E+  +  PK   NF+ L   GYY    FHRNIKGFMIQ            SIWGK FNDE    LKH++RG LSMAN G NTN SQFFI+Y   PHLN  +T+FG VI         L+ +E      + +RP  +IRI  VTI  +P
Sbjct:  315 ISTTSGDINLELHTEYAPKAVWNFIKLAKKGYYKDVTFHRNIKGFMIQGGDPTGTGRGGESIWGKYFNDEFEGPLKHDSRGTLSMANKGKNTNSSQFFIAYRALPHLNLKHTIFGHVIDDPTPSSPTLNKLETHPVNPTTNRPTPDIRIVDVTIFVDP 472          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL1_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhizopus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.013e-30
Identity = 67/139 (48.20%), Postives = 84/139 (60.43%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDR 432
            V L T++G I  E+  D  P+T +NF  L   GYYDG  FHR I  FMIQ            SI+G++F DEI   L+H   GILSMAN+GPNTNGSQFFI+ A  P L+G +T+FGRV  G  V+  M   +T + DR
Sbjct:    7 VILDTSMGSIHIELYWDHAPRTCKNFYELAKRGYYDGVSFHRIIADFMIQGGDPTGTGRGGTSIYGERFADEINPGLQHTGAGILSMANAGPNTNGSQFFITLAPTPWLDGKHTIFGRVSDGMNVVKRMGLVKTDANDR 145          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL2_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neurospora crassa GN=cyp-8 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.285e-29
Identity = 71/163 (43.56%), Postives = 89/163 (54.60%), Query Frame = 1
Query:    1 RGKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFE-VLDLMEKAQTGSGDRPLAEIRINRVTIHANPLA 486
            + K  V + TNLG +  E+  +  PK   NFL L   GYY    FHR+I+ FMIQ            SIWGK F DE      H+ARGI+SMAN G NTN SQFFI+Y    HL+  +T+F +VI G +  L  ME   T   DRPL +I I  + I  +P A
Sbjct:  327 KNKGYVRMETNLGPLTLELLPEFAPKAVWNFLRLSEKGYYRDVAFHRSIRNFMIQGGDPSGTGRGGSSIWGKNFEDEFEGPNTHSARGIVSMANKGKNTNSSQFFITYRPASHLDRKHTIFAKVIEGQDTTLTAMENVATDGSDRPLNKIVIKDMIILIDPFA 489          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL1_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus musculus GN=Ppil1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.285e-29
Identity = 65/147 (44.22%), Postives = 91/147 (61.90%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +V L T++G I  E+     PKT +NF  L   GYY+GT FHR IK FMIQ            SI+GK+F DE+   LK    GIL+MAN+GP+TNGSQFF++ A    L+G +T+FGRV  G  +++ +   +T S DRP+ +++I
Sbjct:   13 NVYLETSMGVIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKI 159          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL1_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo sapiens GN=PPIL1 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.285e-29
Identity = 65/147 (44.22%), Postives = 91/147 (61.90%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +V L T++G I  E+     PKT +NF  L   GYY+GT FHR IK FMIQ            SI+GK+F DE+   LK    GIL+MAN+GP+TNGSQFF++ A    L+G +T+FGRV  G  +++ +   +T S DRP+ +++I
Sbjct:   13 NVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKI 159          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIL1_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos taurus GN=PPIL1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.285e-29
Identity = 65/147 (44.22%), Postives = 91/147 (61.90%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +V L T++G I  E+     PKT +NF  L   GYY+GT FHR IK FMIQ            SI+GK+F DE+   LK    GIL+MAN+GP+TNGSQFF++ A    L+G +T+FGRV  G  +++ +   +T S DRP+ +++I
Sbjct:   13 NVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKI 159          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPWD1_PONAB (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Pongo abelii GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.090e-29
Identity = 66/153 (43.14%), Postives = 89/153 (58.17%), Query Frame = 1
Query:   13 SVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTG-SGDRPLAEIRINRVTI 468
            S  +HT++GDI  ++   E PKT ENF     +GYY+G  FHR IKGFMIQ            SIWG +F DE   +L+H+    LSMAN+G NTNGSQFFI+    P L+  +TVFGRV  G EV+  +   +     D+P  ++ I  +T+
Sbjct:  493 SAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 645          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
CYP9_SCHPO4.164e-3145.16Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosac... [more]
CYP4_CAEEL5.439e-3142.95Peptidyl-prolyl cis-trans isomerase 4 OS=Caenorhab... [more]
PPIL3_EMENI4.604e-3041.90Peptidyl-prolyl cis-trans isomerase-like 3 OS=Emer... [more]
PPIL2_EMENI6.013e-3046.20Peptidyl-prolyl cis-trans isomerase-like 2 OS=Emer... [more]
PPIL1_RHIOR6.013e-3048.20Peptidyl-prolyl cis-trans isomerase-like 1 OS=Rhiz... [more]
PPIL2_NEUCR2.285e-2943.56Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neur... [more]
PPIL1_MOUSE2.285e-2944.22Peptidyl-prolyl cis-trans isomerase-like 1 OS=Mus ... [more]
PPIL1_HUMAN2.285e-2944.22Peptidyl-prolyl cis-trans isomerase-like 1 OS=Homo... [more]
PPIL1_BOVIN2.285e-2944.22Peptidyl-prolyl cis-trans isomerase-like 1 OS=Bos ... [more]
PPWD1_PONAB5.090e-2943.14Peptidylprolyl isomerase domain and WD repeat-cont... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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