CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: SDC10_PONAB (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Pongo abelii GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.435e-23
Identity = 59/157 (37.58%), Postives = 83/157 (52.87%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD--RPLAEIRINRVTIHANP 480
            V L T  GDI  E+   E PK   NF+ LC   YYD TIFHR + GF++Q            SI+G  F DE    L+ N RG+++MAN+G + NGSQFF +  +   LN  +T+FG+V  G  V +++  ++    D  RP    +I    +  NP
Sbjct:   15 VLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDEERPHNPHKIKSCEVLFNP 170          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: SDC10_MACFA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Macaca fascicularis GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.435e-23
Identity = 59/157 (37.58%), Postives = 83/157 (52.87%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD--RPLAEIRINRVTIHANP 480
            V L T  GDI  E+   E PK   NF+ LC   YYD TIFHR + GF++Q            SI+G  F DE    L+ N RG+++MAN+G + NGSQFF +  +   LN  +T+FG+V  G  V +++  ++    D  RP    +I    +  NP
Sbjct:   15 VLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDEERPHNPHKIKSCEVLFNP 170          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: SDC10_HUMAN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Homo sapiens GN=SDCCAG10 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.435e-23
Identity = 59/157 (37.58%), Postives = 83/157 (52.87%), Query Frame = 1
Query:   16 VTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD--RPLAEIRINRVTIHANP 480
            V L T  GDI  E+   E PK   NF+ LC   YYD TIFHR + GF++Q            SI+G  F DE    L+ N RG+++MAN+G + NGSQFF +  +   LN  +T+FG+V  G  V +++  ++    D  RP    +I    +  NP
Sbjct:   15 VLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNP 170          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.435e-23
Identity = 66/148 (44.59%), Postives = 85/148 (57.43%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALC--------ASG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAE 444
            G +  E+  D VPKTAENF ALC        +SG   +Y G+IFHR IK FM Q             SI+G+KF DE    L H+   +LSMAN+G NTNGSQFFI+    PHLNG + VFG VI G  ++  +E+   G  D+P+ +
Sbjct:   22 GRVVFELYNDVVPKTAENFRALCTGEKGASESSGKQLHYKGSIFHRIIKDFMCQGGDFTHGSGIGGESIYGEKFEDE-NFQLTHDKPFLLSMANAGANTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQLERCDKGENDKPVED 168          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.435e-23
Identity = 64/145 (44.14%), Postives = 88/145 (60.69%), Query Frame = 1
Query:   31 NLGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +LG I   +    VP+TAENF AL     G+ Y+G+ FHR IK FMIQ             SI+G KF DE    L+H   G+LSMAN+G +TNGSQFFI+ A  P L+G + VFG V+ G++++D ++    G  DRPL +++I
Sbjct:   46 SLGRIVLGLYGKTVPETAENFRALATGEKGFGYEGSNFHRVIKDFMIQGGDFTRGDGTGGKSIYGAKFKDE-NFKLRHTKTGLLSMANAGKDTNGSQFFITTAVTPWLDGKHVVFGEVLEGYDIVDKIQNVPKGRNDRPLKDVKI 189          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_KLULA (Peptidyl-prolyl cis-trans isomerase D OS=Kluyveromyces lactis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.874e-23
Identity = 68/152 (44.74%), Postives = 86/152 (56.58%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCA--SGY----------YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            G I  E+  D VPKTAENFL LC   SG+          Y G+IFHR IK FM Q             SI+G+KF DE   +LKH+   +LSMAN+G NTNGSQ FI+    PHL+G + VFG VI G  ++  +E   T   D+P  E++I
Sbjct:   20 GRIVFELYSDVVPKTAENFLKLCEGNSGFAKSKPDIPLSYKGSIFHRVIKSFMCQFGDFTNFNGTGGESIYGEKFEDE-NFTLKHDKPFLLSMANAGANTNGSQCFITCVPTPHLDGKHVVFGEVIQGKRLVRTIENNATDEADKPAKEVKI 170          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_STAAW (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MW2) GN=MW0836 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 66/184 (35.87%), Postives = 91/184 (49.46%), Query Frame = 1
Query:    1 RGKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            +G++ V +HTN GD+  ++  +  PKT ENF+    +GYYDG  FHR I  FMIQ            SI+G  F DE   +   N  G LSMANSGPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G  D+PL ++ I  + +
Sbjct:   13 QGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLN-AFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDV 195          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_STAAS (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0824 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 66/184 (35.87%), Postives = 91/184 (49.46%), Query Frame = 1
Query:    1 RGKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            +G++ V +HTN GD+  ++  +  PKT ENF+    +GYYDG  FHR I  FMIQ            SI+G  F DE   +   N  G LSMANSGPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G  D+PL ++ I  + +
Sbjct:   13 QGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLN-AFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDV 195          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_STAAR (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0916 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 66/184 (35.87%), Postives = 91/184 (49.46%), Query Frame = 1
Query:    1 RGKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            +G++ V +HTN GD+  ++  +  PKT ENF+    +GYYDG  FHR I  FMIQ            SI+G  F DE   +   N  G LSMANSGPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G  D+PL ++ I  + +
Sbjct:   13 QGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLN-AFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDV 195          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_STAAN (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain N315) GN=SA0815 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 66/184 (35.87%), Postives = 91/184 (49.46%), Query Frame = 1
Query:    1 RGKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            +G++ V +HTN GD+  ++  +  PKT ENF+    +GYYDG  FHR I  FMIQ            SI+G  F DE   +   N  G LSMANSGPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G  D+PL ++ I  + +
Sbjct:   13 QGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLN-AFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDV 195          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
SDC10_PONAB1.435e-2337.58Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Po... [more]
SDC10_MACFA1.435e-2337.58Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ma... [more]
SDC10_HUMAN1.435e-2337.58Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ho... [more]
PPID_DEBHA1.435e-2344.59Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
PPIB_EMENI1.435e-2344.14Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]
PPID_KLULA1.874e-2344.74Peptidyl-prolyl cis-trans isomerase D OS=Kluyverom... [more]
PPI1_STAAW2.447e-2335.87Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAS2.447e-2335.87Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAR2.447e-2335.87Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAN2.447e-2335.87Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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