CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_STAAM (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0954 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 66/184 (35.87%), Postives = 91/184 (49.46%), Query Frame = 1
Query:    1 RGKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            +G++ V +HTN GD+  ++  +  PKT ENF+    +GYYDG  FHR I  FMIQ            SI+G  F DE   +   N  G LSMANSGPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G  D+PL ++ I  + +
Sbjct:   13 QGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLN-AFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDV 195          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_STAAC (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain COL) GN=SACOL0957 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 66/184 (35.87%), Postives = 91/184 (49.46%), Query Frame = 1
Query:    1 RGKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            +G++ V +HTN GD+  ++  +  PKT ENF+    +GYYDG  FHR I  FMIQ            SI+G  F DE   +   N  G LSMANSGPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G  D+PL ++ I  + +
Sbjct:   13 QGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLN-AFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLTDGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDV 195          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_STAAB (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=SAB0821 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 66/184 (35.87%), Postives = 91/184 (49.46%), Query Frame = 1
Query:    1 RGKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            +G++ V +HTN GD+  ++  +  PKT ENF+    +GYYDG  FHR I  FMIQ            SI+G  F DE   +   N  G LSMANSGPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G  D+PL ++ I  + +
Sbjct:   13 QGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLN-AFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDV 195          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_STAA8 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain NCTC 8325) GN=SAOUHSC_00891 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 66/184 (35.87%), Postives = 91/184 (49.46%), Query Frame = 1
Query:    1 RGKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            +G++ V +HTN GD+  ++  +  PKT ENF+    +GYYDG  FHR I  FMIQ            SI+G  F DE   +   N  G LSMANSGPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G  D+PL ++ I  + +
Sbjct:   13 QGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLN-AFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDV 195          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPI1_STAA3 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain USA300) GN=SAUSA300_0857 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 66/184 (35.87%), Postives = 91/184 (49.46%), Query Frame = 1
Query:    1 RGKMSVTLHTNLGDIKCEIACDEVPKTAENFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXXSIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 468
            +G++ V +HTN GD+  ++  +  PKT ENF+    +GYYDG  FHR I  FMIQ            SI+G  F DE   +   N  G LSMANSGPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G  D+PL ++ I  + +
Sbjct:   13 QGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLN-AFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDV 195          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: CYP9_CAEBR (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis briggsae GN=cyn-9 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.447e-23
Identity = 63/152 (41.45%), Postives = 87/152 (57.24%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALC-----------ASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            +G I+ ++   E PKT ENF ALC           A  +Y G   HR +K FMIQ             SI+G+ F+DE +  LKH+   +LSMAN GPN+N SQFFI+ A  PH NG + VFG VI G EV+D+++  +     +P+A++RI
Sbjct:   19 IGRIEIKLFTSEAPKTCENFRALCTGEVGMAPNNKARLHYKGNEIHRVVKKFMIQGGDITDGDGRGGFSIYGRYFDDE-KFVLKHSKPYLLSMANKGPNSNSSQFFITTAPAPHCNGKHVVFGEVIKGREVVDVLDNLEVDGKSKPIAKVRI 169          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_EMENI (Peptidyl-prolyl cis-trans isomerase D OS=Emericella nidulans GN=cpr6 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23
Identity = 69/150 (46.00%), Postives = 86/150 (57.33%), Query Frame = 1
Query:   37 GDIKCEIACDEVPKTAENFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            G I  E+  D VPKTAENF ALC             ++ G+IFHR IK FMIQ             SI+G+KF DE  E LKH+   +LSMANSGP TNGSQFFI+    PHL+G + VFG VI+G  V+  +E   T   D+P  ++ I
Sbjct:   21 GRIAFELFNDVVPKTAENFRALCTGEKGMGKQGKPLHFKGSIFHRVIKQFMIQGGDFTAFNGTGGESIYGEKFPDENFE-LKHDRPFLLSMANSGPGTNGSQFFITTVPTPHLDGKHVVFGEVINGKSVVRKIENMPT-QADKPTTDVTI 168          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_PIG (Peptidyl-prolyl cis-trans isomerase A OS=Sus scrofa GN=PPIA PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23
Identity = 65/135 (48.15%), Postives = 83/135 (61.48%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF+DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_BOVIN (Peptidyl-prolyl cis-trans isomerase A OS=Bos taurus GN=PPIA PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.196e-23
Identity = 65/135 (48.15%), Postives = 83/135 (61.48%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF+DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150          
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 65/146 (44.52%), Postives = 84/146 (57.53%), Query Frame = 1
Query:   34 LGDIKCEIACDEVPKTAENFLALCASG-----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRP 435
            +G I  E+  D VPKTAENF ALC              ++ G  FHR IK FMIQ             SI+G+KF DE     KH+  G+LSMAN+GPNTNGSQFFI+    PHL+G + VFG+VI G  V  ++E  +  +G++P
Sbjct:   29 VGRIVLELFADIVPKTAENFRALCTGEKGTGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDE-NFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARMLENVEV-NGEKP 172          
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPI1_STAAM2.447e-2335.87Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAC2.447e-2335.87Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAB2.447e-2335.87Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA82.447e-2335.87Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAA32.447e-2335.87Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
CYP9_CAEBR2.447e-2341.45Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPID_EMENI3.196e-2346.00Peptidyl-prolyl cis-trans isomerase D OS=Emericell... [more]
PPIA_PIG3.196e-2348.15Peptidyl-prolyl cis-trans isomerase A OS=Sus scrof... [more]
PPIA_BOVIN3.196e-2348.15Peptidyl-prolyl cis-trans isomerase A OS=Bos tauru... [more]
PPID_RAT4.174e-2344.5240 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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