CN185473

Overview
NameCN185473
Unique NameCN185473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 63/144 (43.75%), Postives = 86/144 (59.72%), Query Frame = 1 
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 453
            LG +   +    VPKTAENF AL     G+ Y+G+ FHR IK FMIQ             SI+G+KF DE    L+H  +G+LSMAN+G +TNGSQFFI+    P L+G + VFG V+ G+E++  +E    G  DRP+  ++I
Sbjct:   48 LGRVVLGLYGKTVPKTAENFRALATGEKGFGYEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADE-NFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEIVAQIENVPKGRSDRPVETVKI 190
[Close]
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_RABIT (Peptidyl-prolyl cis-trans isomerase A OS=Oryctolagus cuniculus GN=PPIA PE=2 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 66/135 (48.89%), Postives = 81/135 (60.00%), Query Frame = 1 
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFGRV  G  +++ ME   + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFLLKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGRVKEGMSIVEAMEHFGSENG 150
[Close]
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_PONPY (Peptidyl-prolyl cis-trans isomerase A OS=Pongo pygmaeus GN=PPIA PE=2 SV=4)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 1 
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150
[Close]
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_PAPAN (Peptidyl-prolyl cis-trans isomerase A OS=Papio anubis GN=PPIA PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 1 
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150
[Close]
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_PANTR (Peptidyl-prolyl cis-trans isomerase A OS=Pan troglodytes GN=PPIA PE=3 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 1 
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150
[Close]
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_PANPA (Peptidyl-prolyl cis-trans isomerase A OS=Pan paniscus GN=PPIA PE=3 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 1 
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150
[Close]
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_MACMU (Peptidyl-prolyl cis-trans isomerase A OS=Macaca mulatta GN=PPIA PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 1 
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150
[Close]
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_HYLSY (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates syndactylus GN=PPIA PE=3 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 1 
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150
[Close]
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLE (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates leucogenys GN=PPIA PE=3 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 1 
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150
[Close]
BLAST of CN185473 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 4.174e-23
Identity = 65/135 (48.15%), Postives = 82/135 (60.74%), Query Frame = 1 
Query:   34 LGDIKCEIACDEVPKTAENFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXX-SIWGKKFNDEIRESLKHNARGILSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 426
            LG +  E+  D+VPKTAENF AL     G+ Y G+ FHR I GFM Q             SI+G+KF DE    LKH   GILSMAN+GPNTNGSQFFI  AK   L+G + VFG+V  G  +++ ME+  + +G
Sbjct:   17 LGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDE-NFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNG 150
The following BLAST results are available for this feature:
BLAST of CN185473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
PPIB_ASPNG4.174e-2343.75Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIA_RABIT4.174e-2348.89Peptidyl-prolyl cis-trans isomerase A OS=Oryctolag... [more]
PPIA_PONPY4.174e-2348.15Peptidyl-prolyl cis-trans isomerase A OS=Pongo pyg... [more]
PPIA_PAPAN4.174e-2348.15Peptidyl-prolyl cis-trans isomerase A OS=Papio anu... [more]
PPIA_PANTR4.174e-2348.15Peptidyl-prolyl cis-trans isomerase A OS=Pan trogl... [more]
PPIA_PANPA4.174e-2348.15Peptidyl-prolyl cis-trans isomerase A OS=Pan panis... [more]
PPIA_MACMU4.174e-2348.15Peptidyl-prolyl cis-trans isomerase A OS=Macaca mu... [more]
PPIA_HYLSY4.174e-2348.15Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLE4.174e-2348.15Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLA4.174e-2348.15Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185473 ID=CN185473; Name=CN185473; organism=Citrus sinensis; type=EST; length=688bp
AGGGGTAAGATGTCGGTAACTCTACACACTAATCTGGGTGATATTAAGTG
CGAGATTGCTTGCGACGAAGTCCCTAAGACGGCTGAGAATTTTTTGGCAC
TATGCGCGAGTGGTTACTACGATGGGACCATTTTTCACCGGAATATTAAA
GGTTTTATGATTCAAGGTGGAGACCCAACAGGCACTGGAAAAGGCGGAAC
AAGCATATGGGGCAAGAAGTTCAATGATGAGATAAGGGAGTCCCTCAAGC
ATAATGCTAGAGGGATACTGTCAATGGCCAATAGTGGCCCTAACACTAAT
GGAAGCCAATTCTTCATCTCTTATGCAAAGCAGCCCCATCTTAACGGATT
GTACACTGTGTTTGGTAGAGTAATTCATGGGTTCGAAGTTCTTGACCTTA
TGGAAAAGGCTCAAACTGGATCAGGGGACCGGCCACTTGCGGAGATAAGG
ATCAATCGAGTTACCATACATGCTAACCCACTTGCTGTCTAGCTTTGTCT
GAAAATTTCTTGTTGTATAACATTGTAAAGAGGCTTAGTGTGGAGTGGGA
ACAGTGACTTACGATTAAACTCCCAGTAGACTCTGTACATTTTTCTTTTC
CCAGTTATGACTATGGGCTTGAAGGAAGAAGTAACCGCAGAATTTTATGT
AGCATCAAATGGTGAGATTGACGATTGAGAAAAAAAAA
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