CN185472

Overview
NameCN185472
Unique NameCN185472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length635
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17
Identity = 58/117 (49.57%), Postives = 66/117 (56.41%), Query Frame = -3
Query:  295 NFLALCA--SGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 633
            NF  LC    GY Y G  FHR I  FM Q             SI+GKKFNDE   +LKHN+ G  SMANSG NTNGSQFFI   K   L+  + VFG VI G EV+  ME+  + SG
Sbjct:  170 NFRQLCTHEQGYGYKGCSFHRVIPEFMCQGGDFTNNNGTGGKSIYGKKFNDE-NFNLKHNSFGTLSMANSGANTNGSQFFICTTKTDWLDNKHVVFGHVISGAEVVRKMERCGSKSG 285          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPID_AMAMU (Peptidyl-prolyl cis-trans isomerase D OS=Amanita muscaria GN=Cyp40 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17
Identity = 56/127 (44.09%), Postives = 71/127 (55.91%), Query Frame = -3
Query:  286 NFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRP 633
            NF ALC        SG   +Y G+ FHR IKGFM Q             SI+G+KF DE    + H+   + SMAN+GPNTNGSQFFI+ +  PHL+G + VFG VI G  V+  +E     +GD P
Sbjct:   36 NFRALCTGEKGLGQSGKPLWYKGSAFHRVIKGFMCQGGDFTAGNGTGGESIYGEKFEDE-GFPVHHSRPFLLSMANAGPNTNGSQFFITVSATPHLDGKHVVFGEVIKGRSVVRTIENNPATNGDVP 161          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17
Identity = 58/126 (46.03%), Postives = 70/126 (55.56%), Query Frame = -3
Query:  268 NFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 633
            NF+AL     GY Y G+ FHR IK FMIQ             SI+G+ F DE    LKH   G  SMAN+GP+TNGSQFFI+  K   L+G + VFG+VI G  V+  +E   T   DRPL    I
Sbjct:   69 NFVALATGEKGYGYKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDE-NFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVVHSIELQATDGHDRPLTNCSI 193          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17
Identity = 50/113 (44.25%), Postives = 66/113 (58.41%), Query Frame = -3
Query:  268 YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 603
            Y G+ FHR IK FMIQ             SI+G +F DE    L+H   G  SMAN+GP+TNGSQFFI+  K   L+G + VFG+V+ G  ++  +E   T S DRP+  I+I
Sbjct:   81 YKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDE-NFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDSRDRPVKSIKI 192          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17
Identity = 55/124 (44.35%), Postives = 65/124 (52.42%), Query Frame = -3
Query:  295 NFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 633
            NF ALC             +Y G+ FHR I GFM Q             SI+G KFNDE     KH   GI SMAN+GP TNGSQFFI  AK   LNG + VFG+V+ G +V+   E   + SG
Sbjct:   35 NFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDE-NFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSG 157          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: CWC27_NEUCR (Peptidyl-prolyl isomerase cwc-27 OS=Neurospora crassa GN=cwc-27 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17
Identity = 58/159 (36.48%), Postives = 71/159 (44.65%), Query Frame = -3
Query:  241 NFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXTSIW-------------------------GKKFNDEIRESLKHNARGIPSMANSG-PNTNGSQFFISYAKQPHLNGLYTVFGRVIHG--FEVLDLMEKAQTGSGDRPLAEIRINRVTIHANP 633
            NFL L   GYYD TIFHR I GF++Q            SI+                         G  F DE    LK N RG+  MAN G P+TN SQFF +  K   L G  T+FGRV     + +  + E      G+RPL  I+I R+ I  NP
Sbjct:   39 NFLQLALDGYYDNTIFHRLIPGFIVQGGDPSGTGHGGESIYDNGALSGDLDPWPMDQRRGKNAGPHGVNFKDEFHSRLKFNRRGLLGMANEGAPDTNSSQFFFTLGKADELTGKNTMFGRVAGDTIYNLAKIGEAEVEEGGERPLYPIKITRIEILINP 197          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.003e-17
Identity = 55/124 (44.35%), Postives = 67/124 (54.03%), Query Frame = -3
Query:  295 NFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 633
            NF ALC             ++ G+IFHR I GFM Q             SI+G KF DE     KH   GI SMANSGPNTNGSQFFI   K   L+G + VFG+V+ G +V+  +EK  + SG
Sbjct:   35 NFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDE-NFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSG 157          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIG_RAT (Peptidyl-prolyl cis-trans isomerase G OS=Rattus norvegicus GN=Ppig PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17
Identity = 49/114 (42.98%), Postives = 68/114 (59.65%), Query Frame = -3
Query:  268 YYDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 606
            +Y   +FHR +K FM+Q             SI+G  F DE   ++KHN   + SMAN G +TNGSQFFI+    PHL+G + VFG+VI G EV+  +E  +T +  +P AE+RI
Sbjct:   59 HYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDE-SFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRI 171          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIG_MOUSE (Peptidyl-prolyl cis-trans isomerase G OS=Mus musculus GN=Ppig PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17
Identity = 49/114 (42.98%), Postives = 68/114 (59.65%), Query Frame = -3
Query:  268 YYDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 606
            +Y   +FHR +K FM+Q             SI+G  F DE   ++KHN   + SMAN G +TNGSQFFI+    PHL+G + VFG+VI G EV+  +E  +T +  +P AE+RI
Sbjct:   59 HYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDE-SFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRI 171          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIG_HUMAN (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 6.534e-17
Identity = 49/114 (42.98%), Postives = 68/114 (59.65%), Query Frame = -3
Query:  268 YYDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 606
            +Y   +FHR +K FM+Q             SI+G  F DE   ++KHN   + SMAN G +TNGSQFFI+    PHL+G + VFG+VI G EV+  +E  +T +  +P AE+RI
Sbjct:   59 HYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDE-SFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRI 171          
The following BLAST results are available for this feature:
BLAST of CN185472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
PPIE_DROME5.003e-1749.57Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]
PPID_AMAMU5.003e-1744.09Peptidyl-prolyl cis-trans isomerase D OS=Amanita m... [more]
PPIC_HUMAN5.003e-1746.03Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
PPIB_SCHMA5.003e-1744.25Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
CYPH_SOLLC5.003e-1744.35Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CWC27_NEUCR5.003e-1736.48Peptidyl-prolyl isomerase cwc-27 OS=Neurospora cra... [more]
CP18D_ARATH5.003e-1744.35Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
PPIG_RAT6.534e-1742.98Peptidyl-prolyl cis-trans isomerase G OS=Rattus no... [more]
PPIG_MOUSE6.534e-1742.98Peptidyl-prolyl cis-trans isomerase G OS=Mus muscu... [more]
PPIG_HUMAN6.534e-1742.98Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185472 ID=CN185472; Name=CN185472; organism=Citrus sinensis; type=EST; length=635bp
GGGGGGGGGGGGGGGGGGGCGGCGCGCCCCCTTTTTTTTTTTTCATCGTC
AATCTCACCATTTGATGCTACATAAAATTCTGCCTTTACTTCTTCCTTCA
AGCCCATAGTCATAACTGAGGAACCTTAAAATGTACAGAGTCTACTGGGA
GTTTAATCGTAAGTCACTGTTCCCACTCCACACTAAGCCTCTTTACAATG
TTATACAACAAGAAATTTTCAGACAAAGCTAGACAGCAAGGGGGTTAGCA
TGTATGGTAACTCGATTGATCCTTATCTCCGCAAGTGGCCGGTCCCCTGA
TCCAGTTTGAGCCTTTTCCATAAGGTCAAGAACTTCGAACCCATGAATTA
CTCTACCAAACACAGTGTACAATCCGTTAAGATGGGGCTGCTTTGCATAA
GAGATGAAGAATTGGCTTCCATTAGTGTTAGGGCCACTATTGGCCATTGA
CGGGATCCCTCTAGCATTATGCTTGAGGGACTCCCTTATCTCATCATTGA
ACTTCTTGCCCCATATGCTTGTTCCGCCTTTTCCAGTGCCTGTTGGGTCT
CCACCTTGAATCATAAAACCTTTAATATTCCGGTGAAAAATGGTCCCATC
ATAGTAACCACTCGCGCATAATGCCAAAAAATTCT
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