CN185472

Overview
NameCN185472
Unique NameCN185472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length635
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIE_SCHJA (Peptidyl-prolyl cis-trans isomerase E (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.224e-16
Identity = 54/117 (46.15%), Postives = 65/117 (55.56%), Query Frame = -3
Query:  295 NFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 633
            NF ALC    G+ Y    FHR I  FM Q             SI+G+KF+DE    L+H   G+ SMANSGPNTNGSQFFI   K   L+G + VFGRV+ G  V+  ME   + SG
Sbjct:   49 NFRALCTGDRGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDE-NFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSG 164          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.224e-16
Identity = 52/117 (44.44%), Postives = 68/117 (58.12%), Query Frame = -3
Query:  295 NFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 633
            NF ALC    G+ Y G+IFHR I  FM+Q             SI+G KF DE     +H+  G+ SMAN+GPNTNGSQFFI+    P L+G + VFG V  G +++  +E   +GSG
Sbjct:   33 NFRALCTGEKGFGYKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADE-NFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIVKKIESFGSGSG 148          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIA_BLAGE (Peptidyl-prolyl cis-trans isomerase OS=Blattella germanica GN=CYPA PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.435e-16
Identity = 54/131 (41.22%), Postives = 73/131 (55.73%), Query Frame = -3
Query:  259 NFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEK--AQTGSGDRPLAEIRINRV 633
            NF ALC    G+ Y G+ FHR I  FM Q             SI+G KF DE    LKH   GI  MAN+GPNTNGSQFFI+ AK   L+  + VFG V+ G +V+  +E   +Q+G  ++ +A +   ++
Sbjct:   35 NFRALCTGEKGFGYKGSRFHRVIPNFMCQGGDFTNHNGTGGKSIYGTKFEDE-NFQLKHTGPGILWMANAGPNTNGSQFFITTAKTSWLDNRHVVFGSVVEGMDVVKKLESLGSQSGKTNKKIAVVDCGQI 164          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIA1_RHIOR (Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus oryzae GN=cyp2 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.435e-16
Identity = 57/127 (44.88%), Postives = 72/127 (56.69%), Query Frame = -3
Query:  265 NFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRIN 633
            NF ALC    G+ Y G  FHR I  FM+Q             SI+G KF DE   +LKH   G  SMAN+GPNTNGSQFFI+  K   L+G + VFGRV  G +V+  +E   + +G  P A+I I+
Sbjct:   35 NFRALCTGEKGFGYKGCSFHRVIPEFMLQGGDFTNHNGTGGKSIYGNKFRDE-NFTLKHTGPGDLSMANAGPNTNGSQFFITTIKCSWLDGKHVVFGRVTEGMDVVQNIESLGSPNG-TPRAKIIID 159          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIA_DROME (Peptidyl-prolyl cis-trans isomerase OS=Drosophila melanogaster GN=Cyp1 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.232e-15
Identity = 54/117 (46.15%), Postives = 65/117 (55.56%), Query Frame = -3
Query:  295 NFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 633
            NF ALC    G+ Y G+IFHR I  FM Q             SI+G KF DE  E LKH   GI SMAN+G NTNGSQFFI   K   L+  + VFG V+ G +V+  +E   + SG
Sbjct:   98 NFRALCTGEKGFGYKGSIFHRVIPNFMCQGGDFTNHNGTGGKSIYGNKFPDENFE-LKHTGSGILSMANAGANTNGSQFFICTVKTAWLDNKHVVFGEVVEGLDVVKKIESYGSQSG 213          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPI1_STAAW (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MW2) GN=MW0836 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.232e-15
Identity = 54/155 (34.84%), Postives = 71/155 (45.81%), Query Frame = -3
Query:  253 NFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXTSIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 633
            NF+    +GYYDG  FHR I  FMIQ            SI+G  F DE   +   N  G  SMANSGPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G  D+PL ++ I  + +
Sbjct:   42 NFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLN-AFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDV 195          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPI1_STAAS (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MSSA476) GN=SAS0824 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.232e-15
Identity = 54/155 (34.84%), Postives = 71/155 (45.81%), Query Frame = -3
Query:  253 NFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXTSIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 633
            NF+    +GYYDG  FHR I  FMIQ            SI+G  F DE   +   N  G  SMANSGPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G  D+PL ++ I  + +
Sbjct:   42 NFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLN-AFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDV 195          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPI1_STAAR (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain MRSA252) GN=SAR0916 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.232e-15
Identity = 54/155 (34.84%), Postives = 71/155 (45.81%), Query Frame = -3
Query:  253 NFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXTSIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 633
            NF+    +GYYDG  FHR I  FMIQ            SI+G  F DE   +   N  G  SMANSGPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G  D+PL ++ I  + +
Sbjct:   42 NFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLN-AFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDV 195          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPI1_STAAN (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain N315) GN=SA0815 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.232e-15
Identity = 54/155 (34.84%), Postives = 71/155 (45.81%), Query Frame = -3
Query:  253 NFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXTSIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 633
            NF+    +GYYDG  FHR I  FMIQ            SI+G  F DE   +   N  G  SMANSGPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G  D+PL ++ I  + +
Sbjct:   42 NFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLN-AFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDV 195          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPI1_STAAM (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV0954 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.232e-15
Identity = 54/155 (34.84%), Postives = 71/155 (45.81%), Query Frame = -3
Query:  253 NFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXTSIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQ----------------------------PHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINRVTI 633
            NF+    +GYYDG  FHR I  FMIQ            SI+G  F DE   +   N  G  SMANSGPNTNGSQFFI   K+                            P L+  +TVFG++I G   L+ +   + G  D+PL ++ I  + +
Sbjct:   42 NFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGMGGESIYGGAFEDEFSLN-AFNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDV 195          
The following BLAST results are available for this feature:
BLAST of CN185472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
PPIE_SCHJA7.224e-1646.15Peptidyl-prolyl cis-trans isomerase E (Fragment) O... [more]
PPIA_CANAL7.224e-1644.44Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
PPIA_BLAGE9.435e-1641.22Peptidyl-prolyl cis-trans isomerase OS=Blattella g... [more]
PPIA1_RHIOR9.435e-1644.88Peptidyl-prolyl cis-trans isomerase A1 OS=Rhizopus... [more]
PPIA_DROME1.232e-1546.15Peptidyl-prolyl cis-trans isomerase OS=Drosophila ... [more]
PPI1_STAAW1.232e-1534.84Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAS1.232e-1534.84Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAR1.232e-1534.84Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAN1.232e-1534.84Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAAM1.232e-1534.84Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185472 ID=CN185472; Name=CN185472; organism=Citrus sinensis; type=EST; length=635bp
GGGGGGGGGGGGGGGGGGGCGGCGCGCCCCCTTTTTTTTTTTTCATCGTC
AATCTCACCATTTGATGCTACATAAAATTCTGCCTTTACTTCTTCCTTCA
AGCCCATAGTCATAACTGAGGAACCTTAAAATGTACAGAGTCTACTGGGA
GTTTAATCGTAAGTCACTGTTCCCACTCCACACTAAGCCTCTTTACAATG
TTATACAACAAGAAATTTTCAGACAAAGCTAGACAGCAAGGGGGTTAGCA
TGTATGGTAACTCGATTGATCCTTATCTCCGCAAGTGGCCGGTCCCCTGA
TCCAGTTTGAGCCTTTTCCATAAGGTCAAGAACTTCGAACCCATGAATTA
CTCTACCAAACACAGTGTACAATCCGTTAAGATGGGGCTGCTTTGCATAA
GAGATGAAGAATTGGCTTCCATTAGTGTTAGGGCCACTATTGGCCATTGA
CGGGATCCCTCTAGCATTATGCTTGAGGGACTCCCTTATCTCATCATTGA
ACTTCTTGCCCCATATGCTTGTTCCGCCTTTTCCAGTGCCTGTTGGGTCT
CCACCTTGAATCATAAAACCTTTAATATTCCGGTGAAAAATGGTCCCATC
ATAGTAACCACTCGCGCATAATGCCAAAAAATTCT
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