CN185472

Overview
NameCN185472
Unique NameCN185472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length635
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIB_ASPNG (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus niger GN=cypB PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.118e-19
Identity = 54/126 (42.86%), Postives = 75/126 (59.52%), Query Frame = -3
Query:  268 NFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 633
            NF AL     G+ Y+G+ FHR IK FMIQ             SI+G+KF DE    L+H  +G+ SMAN+G +TNGSQFFI+    P L+G + VFG V+ G+E++  +E    G  DRP+  ++I
Sbjct:   66 NFRALATGEKGFGYEGSTFHRVIKDFMIQGGDFTRGDGTGGKSIYGEKFADE-NFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEIVAQIENVPKGRSDRPVETVKI 190          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.555e-18
Identity = 56/133 (42.11%), Postives = 73/133 (54.89%), Query Frame = -3
Query:  262 NFLALCASGY--------YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRINR 633
            NF  LC   +        Y  +IFHR IK FM Q           + SI+G KF+DE   +LKH+  G+ SMANSGP TNG QFFI+    P L+G + VFG+V+ G   L  ME   TG+ +RP   +RI +
Sbjct:   21 NFRQLCTGEFRPNHVPEGYKNSIFHRIIKDFMCQGGDFINADGTGSRSIYGDKFDDE-NFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVVDGLLTLRKMENVPTGANNRPKMAVRITQ 152          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: SDC10_PONAB (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Pongo abelii GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.653e-18
Identity = 49/133 (36.84%), Postives = 71/133 (53.38%), Query Frame = -3
Query:  241 NFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXTSIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD--RPLAEIRINRVTIHANP 633
            NF+ LC   YYD TIFHR + GF++Q            SI+G  F DE    L+ N RG+ +MAN+G + NGSQFF +  +   LN  +T+FG+V  G  V +++  ++    D  RP    +I    +  NP
Sbjct:   39 NFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDEERPHNPHKIKSCEVLFNP 170          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: SDC10_MACFA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Macaca fascicularis GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.653e-18
Identity = 49/133 (36.84%), Postives = 71/133 (53.38%), Query Frame = -3
Query:  241 NFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXTSIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD--RPLAEIRINRVTIHANP 633
            NF+ LC   YYD TIFHR + GF++Q            SI+G  F DE    L+ N RG+ +MAN+G + NGSQFF +  +   LN  +T+FG+V  G  V +++  ++    D  RP    +I    +  NP
Sbjct:   39 NFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDEERPHNPHKIKSCEVLFNP 170          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: SDC10_HUMAN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Homo sapiens GN=SDCCAG10 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.653e-18
Identity = 49/133 (36.84%), Postives = 71/133 (53.38%), Query Frame = -3
Query:  241 NFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXTSIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD--RPLAEIRINRVTIHANP 633
            NF+ LC   YYD TIFHR + GF++Q            SI+G  F DE    L+ N RG+ +MAN+G + NGSQFF +  +   LN  +T+FG+V  G  V +++  ++    D  RP    +I    +  NP
Sbjct:   39 NFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLFNP 170          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIL3_EMENI (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Emericella nidulans GN=cyp10 PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.653e-18
Identity = 69/184 (37.50%), Postives = 89/184 (48.37%), Query Frame = -3
Query:  235 NFLALCASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXT-----------------SIWGKK-FNDEIR-ESLKHNARGIPSMAN--------------SGPNTNGSQFFISYAKQPHLNGLYTVFGRVIH------GFEVLDLMEKAQTGSG------------DRPLAEIRINRVTIHANPLA 633
            NF+ALCA+G Y+ T FHR I GFMIQ           +                 SI+     N EI   +L+HN RGI SMA+              +GP  NGSQFFI++A  PHL+G  TVFG+V++      G +VL  +EKA   +             +     +RINRVTIHANP A
Sbjct:   27 NFIALCAAGAYNDTPFHRLIPGFMIQGGDISLGPAANSQGTTPMLPFDDIPKGGTSIYHPSALNQEIHLPALRHNTRGILSMASRPVKNQTAPGSQGATGPTINGSQFFITFAAAPHLDGSSTVFGKVLNLTAEDEGGDVLSKLEKANVKTDKKGKVVQPKENEETEYETLRINRVTIHANPFA 210          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.653e-18
Identity = 56/131 (42.75%), Postives = 73/131 (55.73%), Query Frame = -3
Query:  277 NFLALC--------ASG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAE 633
            NF ALC        +SG   +Y G+IFHR IK FM Q             SI+G+KF DE    L H+   + SMAN+G NTNGSQFFI+    PHLNG + VFG VI G  ++  +E+   G  D+P+ +
Sbjct:   39 NFRALCTGEKGASESSGKQLHYKGSIFHRIIKDFMCQGGDFTHGSGIGGESIYGEKFEDE-NFQLTHDKPFLLSMANAGANTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQLERCDKGENDKPVED 168          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: CYP9_CAEBR (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis briggsae GN=cyn-9 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.653e-18
Identity = 55/134 (41.04%), Postives = 75/134 (55.97%), Query Frame = -3
Query:  268 NFLALC-----------ASGYYDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 633
            NF ALC           A  +Y G   HR +K FMIQ             SI+G+ F+DE +  LKH+   + SMAN GPN+N SQFFI+ A  PH NG + VFG VI G EV+D+++  +     +P+A++RI
Sbjct:   37 NFRALCTGEVGMAPNNKARLHYKGNEIHRVVKKFMIQGGDITDGDGRGGFSIYGRYFDDE-KFVLKHSKPYLLSMANKGPNSNSSQFFITTAPAPHCNGKHVVFGEVIKGREVVDVLDNLEVDGKSKPIAKVRI 169          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.465e-18
Identity = 53/126 (42.06%), Postives = 75/126 (59.52%), Query Frame = -3
Query:  268 NFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 633
            NF AL     G+ Y+G+ FHR IK FMIQ             SI+G+KF DE    ++H  +G+ SMAN+G +TNGSQFFI+    P L+G + VFG V+ G+EV++ +E      GD+P   ++I
Sbjct:   51 NFRALATGEKGFGYEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDE-NFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVLEGYEVVEAIENVPKVPGDKPQQVVKI 175          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIB_ARTBE (Peptidyl-prolyl cis-trans isomerase B OS=Arthroderma benhamiae GN=CPR2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.525e-18
Identity = 53/126 (42.06%), Postives = 75/126 (59.52%), Query Frame = -3
Query:  268 NFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 633
            NF AL     G+ Y+G+ FHR IK FMIQ             SI+G KF DE    L+H  +G+ SMAN+G +TNGSQFFI+ A    L+G + VFG V+ G++++D ++    G  DRP  +++I
Sbjct:   66 NFRALATGEKGFGYEGSTFHRVIKDFMIQGGDFTNGDGTGGKSIYGNKFEDE-NFKLRHTKKGVLSMANAGKDTNGSQFFITTAITAWLDGKHVVFGEVLEGYDIVDKIQVVPKGFQDRPTKDVKI 190          
The following BLAST results are available for this feature:
BLAST of CN185472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
PPIB_ASPNG9.118e-1942.86Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIH_USTMA1.555e-1842.11Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]
SDC10_PONAB2.653e-1836.84Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Po... [more]
SDC10_MACFA2.653e-1836.84Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ma... [more]
SDC10_HUMAN2.653e-1836.84Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ho... [more]
PPIL3_EMENI2.653e-1837.50Peptidyl-prolyl cis-trans isomerase-like 3 OS=Emer... [more]
PPID_DEBHA2.653e-1842.75Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
CYP9_CAEBR2.653e-1841.04Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIB_ASPOR3.465e-1842.06Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIB_ARTBE4.525e-1842.06Peptidyl-prolyl cis-trans isomerase B OS=Arthroder... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185472 ID=CN185472; Name=CN185472; organism=Citrus sinensis; type=EST; length=635bp
GGGGGGGGGGGGGGGGGGGCGGCGCGCCCCCTTTTTTTTTTTTCATCGTC
AATCTCACCATTTGATGCTACATAAAATTCTGCCTTTACTTCTTCCTTCA
AGCCCATAGTCATAACTGAGGAACCTTAAAATGTACAGAGTCTACTGGGA
GTTTAATCGTAAGTCACTGTTCCCACTCCACACTAAGCCTCTTTACAATG
TTATACAACAAGAAATTTTCAGACAAAGCTAGACAGCAAGGGGGTTAGCA
TGTATGGTAACTCGATTGATCCTTATCTCCGCAAGTGGCCGGTCCCCTGA
TCCAGTTTGAGCCTTTTCCATAAGGTCAAGAACTTCGAACCCATGAATTA
CTCTACCAAACACAGTGTACAATCCGTTAAGATGGGGCTGCTTTGCATAA
GAGATGAAGAATTGGCTTCCATTAGTGTTAGGGCCACTATTGGCCATTGA
CGGGATCCCTCTAGCATTATGCTTGAGGGACTCCCTTATCTCATCATTGA
ACTTCTTGCCCCATATGCTTGTTCCGCCTTTTCCAGTGCCTGTTGGGTCT
CCACCTTGAATCATAAAACCTTTAATATTCCGGTGAAAAATGGTCCCATC
ATAGTAACCACTCGCGCATAATGCCAAAAAATTCT
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