CN185472

Overview
NameCN185472
Unique NameCN185472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length635
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.317e-17
Identity = 53/116 (45.69%), Postives = 67/116 (57.76%), Query Frame = -3
Query:  268 GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 609
            GY Y+G+ FHR IK FMIQ             SI+G KF DE    LKH   G+ SMAN+G +TNGSQFFI   K   L+  + VFG V+ G +V+  ME  +T  GD+P+  I I
Sbjct:   92 GYGYEGSSFHRIIKNFMIQGGDFTKGDGTGGKSIYGSKFPDE-NFKLKHTGPGVLSMANAGRDTNGSQFFICTVKTAWLDNRHVVFGHVLEGMDVVYAMENVKTSRGDKPVEPITI 206          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.317e-17
Identity = 55/117 (47.01%), Postives = 69/117 (58.97%), Query Frame = -3
Query:  295 NFLALCAS--GY-YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 633
            NF ALC    GY Y G+ FHR I  FM+Q             SI+G+KF DE   +LKHN  G+ SMAN+GPNTNGSQFFI+    P L+G + VFG V  G +V+  +E   + SG
Sbjct:   33 NFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDE-NFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSG 148          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: CYPH_UROFA (Peptidyl-prolyl cis-trans isomerase OS=Uromyces fabae GN=PIG28 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.720e-17
Identity = 57/118 (48.31%), Postives = 71/118 (60.17%), Query Frame = -3
Query:  295 NFLALCASGYYDG---TIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGF-EVLDLMEKAQTGSG 633
            NF  LC +    G   +IFHR I  FMIQ             SI+GKKF DE  +  KH  RG+ SMAN+GPNTNGSQFFI+  K P L+G + VFG+VI G+ +V+  MEK  + SG
Sbjct:   33 NFRQLCLNPPGKGFKHSIFHRVIPDFMIQGGDFTNGNGTGGESIYGKKFEDENFQK-KHVERGMLSMANAGPNTNGSQFFITVTKTPWLDGKHVVFGKVIEGYDQVVKAMEKTGSQSG 149          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.720e-17
Identity = 55/125 (44.00%), Postives = 66/125 (52.80%), Query Frame = -3
Query:  292 NFLALCASG----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD 633
            NF ALC             +Y G+ FHR I GFM Q             SI+G KF DE    LKH   GI SMANSGPNTNGSQFFI   K   L+G + VFG+V+ G+ V+  ME   +  G+
Sbjct:   35 NFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDE-NFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGN 158          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.246e-17
Identity = 58/130 (44.62%), Postives = 74/130 (56.92%), Query Frame = -3
Query:  277 NFLALCA-------SGY---YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAE 633
            NF ALC        SG    Y G++FHR IK FMIQ             SI+G+KF DE    LKH    + SMAN+GP TNGSQFFI+    PHL+G + VFG+V+ G  V+  +E  +T S DRP+ +
Sbjct:   35 NFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDE-NFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVLKGKAVVRALENLETVS-DRPVED 162          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIB_DICDI (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum GN=cypB PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.246e-17
Identity = 56/124 (45.16%), Postives = 71/124 (57.26%), Query Frame = -3
Query:  295 NFLALCA-------SG---YYDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSG 633
            NF ALC        SG   +Y  + FHR I  FMIQ             SI+GKKFNDE    +KH+  G+ SMAN+GPNTNGSQFFI+      L+G +TVFG VI G +++ L+E   + SG
Sbjct:   61 NFRALCTGEKGLGTSGKPLHYKDSKFHRIIPNFMIQGGDFTRGDGTGGESIYGKKFNDE-NFKIKHSKPGLLSMANAGPNTNGSQFFITTVVTSWLDGRHTVFGEVIEGMDIVKLLESIGSQSG 183          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIB1_RHIOR (Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.246e-17
Identity = 53/122 (43.44%), Postives = 72/122 (59.02%), Query Frame = -3
Query:  268 LALCASGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 627
            LA   +GY Y G+ FHR IK FMIQ             SI+G +F DE    L+H+  G+ SMAN+G +TNGSQFFI+    P L+G + VFGRV+ G +V+  +E   TGS  +P  ++ I
Sbjct:   69 LATGENGYGYKGSTFHRVIKKFMIQGGDFTNHDGTGGKSIYGNRFADE-NFKLRHSTPGLLSMANAGRDTNGSQFFITTVVTPWLDGKHVVFGRVLEGMDVVTKIENTPTGSRSKPSVDVVI 189          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 2.933e-17
Identity = 54/128 (42.19%), Postives = 71/128 (55.47%), Query Frame = -3
Query:  286 NFLALCASG-----------YYDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRP 633
            NF ALC              ++ G  FHR IK FMIQ             SI+G+KF DE     KH+  G+ SMAN+GPNTNGSQFFI+    PHL+G + VFG+VI G  V  ++E  +  +G++P
Sbjct:   47 NFRALCTGEKGTGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDE-NFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARMLENVEV-NGEKP 172          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPID_SCHPO (40 kDa peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=wis2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17
Identity = 54/123 (43.90%), Postives = 72/123 (58.54%), Query Frame = -3
Query:  292 NFLALCASGY--------YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGD 633
            NF +LC +G+        Y G+ FHR IK FM+Q             SI+G+KF DE  E LKH+   + SMAN+GPNTNGSQFFI+    PHL+G + VFG+VI G   +  +E  +T + D
Sbjct:   34 NFASLC-NGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFE-LKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDD 154          
BLAST of CN185472 vs. ExPASy Swiss-Prot
Match: PPIA_PARPR (Peptidyl-prolyl cis-trans isomerase OS=Paramecium primaurelia PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.831e-17
Identity = 53/122 (43.44%), Postives = 72/122 (59.02%), Query Frame = -3
Query:  268 LALCASGY-YDGTIFHRNIKGFMIQXXXXXXXXXXXT-SIWGKKFNDEIRESLKHNARGIPSMANSGPNTNGSQFFISYAKQPHLNGLYTVFGRVIHGFEVLDLMEKAQTGSGDRPLAEIRI 627
            LA  + G+ Y G++FHR I  FM Q             SI+G+KF DE    LKH    + SMAN+GPNTNGSQFFI++   P L+G + VFG V+ GF+ L+L +K  +  G +P   I+I
Sbjct:   37 LATGSRGFGYKGSVFHRVITDFMAQGGDFTNFNGTGGKSIYGEKFADE-NFKLKHTKPALLSMANAGPNTNGSQFFITFVPCPWLDGKHVVFGEVVDGFDTLELFKKNSSQQG-KPKTTIKI 156          
The following BLAST results are available for this feature:
BLAST of CN185472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
PPIB_CRYNE1.317e-1745.69Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
CYPH_SCHPO1.317e-1747.01Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
CYPH_UROFA1.720e-1748.31Peptidyl-prolyl cis-trans isomerase OS=Uromyces fa... [more]
CP19C_ARATH1.720e-1744.00Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]
PPID_RHIOR2.246e-1744.62Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
PPIB_DICDI2.246e-1745.16Peptidyl-prolyl cis-trans isomerase B OS=Dictyoste... [more]
PPIB1_RHIOR2.246e-1743.44Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus... [more]
PPID_RAT2.933e-1742.1940 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]
PPID_SCHPO3.831e-1743.9040 kDa peptidyl-prolyl cis-trans isomerase OS=Schi... [more]
PPIA_PARPR3.831e-1743.44Peptidyl-prolyl cis-trans isomerase OS=Paramecium ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001G07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185472 ID=CN185472; Name=CN185472; organism=Citrus sinensis; type=EST; length=635bp
GGGGGGGGGGGGGGGGGGGCGGCGCGCCCCCTTTTTTTTTTTTCATCGTC
AATCTCACCATTTGATGCTACATAAAATTCTGCCTTTACTTCTTCCTTCA
AGCCCATAGTCATAACTGAGGAACCTTAAAATGTACAGAGTCTACTGGGA
GTTTAATCGTAAGTCACTGTTCCCACTCCACACTAAGCCTCTTTACAATG
TTATACAACAAGAAATTTTCAGACAAAGCTAGACAGCAAGGGGGTTAGCA
TGTATGGTAACTCGATTGATCCTTATCTCCGCAAGTGGCCGGTCCCCTGA
TCCAGTTTGAGCCTTTTCCATAAGGTCAAGAACTTCGAACCCATGAATTA
CTCTACCAAACACAGTGTACAATCCGTTAAGATGGGGCTGCTTTGCATAA
GAGATGAAGAATTGGCTTCCATTAGTGTTAGGGCCACTATTGGCCATTGA
CGGGATCCCTCTAGCATTATGCTTGAGGGACTCCCTTATCTCATCATTGA
ACTTCTTGCCCCATATGCTTGTTCCGCCTTTTCCAGTGCCTGTTGGGTCT
CCACCTTGAATCATAAAACCTTTAATATTCCGGTGAAAAATGGTCCCATC
ATAGTAACCACTCGCGCATAATGCCAAAAAATTCT
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