DC887882

Overview
NameDC887882
Unique NameDC887882
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length459
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSJ (Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CAM1-1 PE=1 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 3.932e-41
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = -2 
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFLNLMARKMKD DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 67.3958 bits (163), Expect = 3.247e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -2 
Query:  204 MARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 434
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM1_ORYSI (Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1-1 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 3.932e-41
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = -2 
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFLNLMARKMKD DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 67.3958 bits (163), Expect = 3.247e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -2 
Query:  204 MARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 434
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM1_DAUCA (Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 3.932e-41
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = -2 
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFLNLMARKMKD DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 67.781 bits (164), Expect = 2.486e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -2 
Query:  204 MARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 434
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM_CAPAN (Calmodulin OS=Capsicum annuum GN=CCM1 PE=2 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 8.761e-41
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = -2 
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFLNLMARKMKD DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:   66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149

HSP 2 Score: 67.781 bits (164), Expect = 2.486e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -2 
Query:  204 MARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 434
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM5_SOLTU (Calmodulin-5/6/7/8 OS=Solanum tuberosum GN=PCM5 PE=1 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 8.761e-41
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = -2 
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFLNLMARKMKD DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:   66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149

HSP 2 Score: 66.6254 bits (161), Expect = 5.538e-11
Identity = 32/69 (46.38%), Postives = 45/69 (65.22%), Query Frame = -2 
Query:  204 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 410
            D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    8 DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM3_ORYSI (Calmodulin-3 OS=Oryza sativa subsp. indica GN=CAM3 PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 8.761e-41
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = -2 
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFLNLMARKMKD DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:   66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 149

HSP 2 Score: 67.3958 bits (163), Expect = 3.247e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -2 
Query:  204 MARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 434
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM2_SOLTU (Calmodulin-2/4 (Fragment) OS=Solanum tuberosum GN=PCM2 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 8.761e-41
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = -2 
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFLNLMARKMKD DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINY+EFVKVMMAK
Sbjct:   41 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMAK 124
[Close]
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM2_ORYSJ (Calmodulin-2 OS=Oryza sativa subsp. japonica GN=CAM2 PE=2 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 8.761e-41
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = -2 
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFLNLMA+KMKD DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   66 FPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = -2 
Query:  204 MARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 434
            MA ++ D +   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-EQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKK 76
[Close]
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM2_ORYSI (Calmodulin-2 OS=Oryza sativa subsp. indica GN=CAM2 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 8.761e-41
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = -2 
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFLNLMA+KMKD DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   66 FPEFLNLMAKKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = -2 
Query:  204 MARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 434
            MA ++ D +   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-EQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAKK 76
[Close]
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM2_ARATH (Calmodulin-2/3/5 OS=Arabidopsis thaliana GN=CAM2 PE=1 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 8.761e-41
Identity = 82/84 (97.62%), Postives = 83/84 (98.81%), Query Frame = -2 
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFLNLMARKMKD DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMI+EADVDGDGQINYEEFVKVMMAK
Sbjct:   66 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 67.781 bits (164), Expect = 2.486e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -2 
Query:  204 MARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 434
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
The following BLAST results are available for this feature:
BLAST of DC887882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 309
Match NameE-valueIdentityDescription
CALM1_ORYSJ3.932e-4198.81Calmodulin-1 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM1_ORYSI3.932e-4198.81Calmodulin-1 OS=Oryza sativa subsp. indica GN=CAM1... [more]
CALM1_DAUCA3.932e-4198.81Calmodulin-1/11/16 OS=Daucus carota GN=CAM-1 PE=2 ... [more]
CALM_CAPAN8.761e-4197.62Calmodulin OS=Capsicum annuum GN=CCM1 PE=2 SV=3[more]
CALM5_SOLTU8.761e-4197.62Calmodulin-5/6/7/8 OS=Solanum tuberosum GN=PCM5 PE... [more]
CALM3_ORYSI8.761e-4197.62Calmodulin-3 OS=Oryza sativa subsp. indica GN=CAM3... [more]
CALM2_SOLTU8.761e-4197.62Calmodulin-2/4 (Fragment) OS=Solanum tuberosum GN=... [more]
CALM2_ORYSJ8.761e-4197.62Calmodulin-2 OS=Oryza sativa subsp. japonica GN=CA... [more]
CALM2_ORYSI8.761e-4197.62Calmodulin-2 OS=Oryza sativa subsp. indica GN=CAM2... [more]
CALM2_ARATH8.761e-4197.62Calmodulin-2/3/5 OS=Arabidopsis thaliana GN=CAM2 P... [more]

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Properties
Property NameValue
Genbank descriptionDC887882 EIC Citrus sinensis cDNA clone EIC1045 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887882 ID=DC887882; Name=DC887882; organism=Citrus sinensis; type=EST; length=459bp
GAGCGGAAAAAAACTAAAACATTAAAAAACTGAAAAGTTGCTCCAGTCAC
AAGACAAATTGAAGCAGGAGACAACATGCTTCCTTTAGCTTGACCTCAGA
GTTATCAAATTAAAATTTATAAAAAAGGAAACTAGGGAACCAATTATATT
AATCAACCAATTTCTTCTTTTCCCAGGAAGTTTTGGTTGGGTGGAGTCAC
TTACTTAGCCATCATAACCTTGACAAATTCCTCGTAATTTATCTGGCCAT
CACCATCGACATCAGCTTCCCTTATCATCTCATCGACTTCCTCATCAGTA
AGCTTCTCCCCTAGGTTTGTCATCACATGGCGCAGCTCAGCAGCTGAGAT
GAAACCATTCTGATCCTTGTCGAAAACCCGGAAGGCCTCTTTCAGCTCCT
CCTCAGAGTCGGNATCCTTCATCTTCCTGGCCATGAGGTTTAGGAATTCA
GGAAAAGCA
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