DC887882

Overview
NameDC887882
Unique NameDC887882
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length459
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM_ACHKL (Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 6.497e-36
Identity = 72/84 (85.71%), Postives = 79/84 (94.05%), Query Frame = -2
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFL +MARKMKD DSEEE+ EAF+ FDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:   66 FPEFLTMMARKMKDTDSEEEILEAFQGFDKDGNGFISAAELRHMMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149          
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALMB_HALRO (Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3)

HSP 1 Score: 149.443 bits (376), Expect = 6.497e-36
Identity = 71/84 (84.52%), Postives = 78/84 (92.86%), Query Frame = -2
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFL +MARKMK+ DSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M  K
Sbjct:   66 FPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTCK 149          

HSP 2 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = -2
Query:  204 MKDXDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 422
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76          
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM_TETPY (Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4)

HSP 1 Score: 148.673 bits (374), Expect = 1.108e-35
Identity = 72/84 (85.71%), Postives = 79/84 (94.05%), Query Frame = -2
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFL+LMARKMKD D+EEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDG INYEEFV++MMAK
Sbjct:   66 FPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGHINYEEFVRMMMAK 149          

HSP 2 Score: 66.2402 bits (160), Expect = 7.233e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = -2
Query:  204 MKDXDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 422
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARK 76          
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CML1_ORYSI (Calmodulin-like protein 1 OS=Oryza sativa subsp. indica GN=CML1 PE=1 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.447e-35
Identity = 73/84 (86.90%), Postives = 77/84 (91.67%), Query Frame = -2
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            F EFL LMARK++D DSEEELKEAFRVFDKDQNGFISAAELRHVM N+GE+LTDEEV EMI EADVDGDGQINYEEFVK MMAK
Sbjct:   66 FKEFLGLMARKLRDKDSEEELKEAFRVFDKDQNGFISAAELRHVMANIGERLTDEEVGEMISEADVDGDGQINYEEFVKCMMAK 149          
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM_SUBDO (Calmodulin OS=Suberites domuncula PE=2 SV=3)

HSP 1 Score: 148.288 bits (373), Expect = 1.447e-35
Identity = 71/84 (84.52%), Postives = 78/84 (92.86%), Query Frame = -2
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFL +MARKMK+ DSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD DGDGQ+NYEEFV +M +K
Sbjct:   66 FPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADTDGDGQVNYEEFVGMMTSK 149          

HSP 2 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = -2
Query:  204 MKDXDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 422
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDTDGNGTIDFPEFLTMMARK 76          
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM_PHYPO (Calmodulin OS=Physarum polycephalum PE=2 SV=3)

HSP 1 Score: 147.902 bits (372), Expect = 1.890e-35
Identity = 69/84 (82.14%), Postives = 80/84 (95.24%), Query Frame = -2
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFL +MARKM D D+EEE++EAF+VFDKD NGFISAAELRHVMTNLGEKL+DEEVDEMIREADVDGDGQ+NY+EFVK+M++K
Sbjct:   66 FPEFLTMMARKMADTDTEEEIREAFKVFDKDGNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQVNYDEFVKMMLSK 149          
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM_OREMO (Calmodulin OS=Oreochromis mossambicus GN=calm PE=2 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 2.469e-35
Identity = 70/84 (83.33%), Postives = 79/84 (94.05%), Query Frame = -2
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            FPEFL +MARKMKD DSEEE++EAFRVFDKD NG+ISAAELR+VMTNLGEKLTDE VDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRYVMTNLGEKLTDEXVDEMIREADIDGDGQVNYEEFVQMMTAK 149          

HSP 2 Score: 65.855 bits (159), Expect = 9.447e-11
Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = -2
Query:  204 MKDXDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 422
            M D  +EE   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARK 76          
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CML1_ORYSJ (Calmodulin-like protein 1 OS=Oryza sativa subsp. japonica GN=CML1 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 4.211e-35
Identity = 72/84 (85.71%), Postives = 76/84 (90.48%), Query Frame = -2
Query:  204 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 455
            F EFL LMARK++D DSEEELKEAFRVFDKDQNGFISA ELRHVM N+GE+LTDEEV EMI EADVDGDGQINYEEFVK MMAK
Sbjct:   66 FKEFLGLMARKLRDKDSEEELKEAFRVFDKDQNGFISATELRHVMANIGERLTDEEVGEMISEADVDGDGQINYEEFVKCMMAK 149          
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALM_ORYLA (Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm1 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 5.500e-35
Identity = 69/78 (88.46%), Postives = 75/78 (96.15%), Query Frame = -2
Query:  222 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 455
            FPEFL +MARKMKD DSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV
Sbjct:   59 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 136          
BLAST of DC887882 vs. ExPASy Swiss-Prot
Match: CALN_CHICK (Neo-calmodulin (Fragment) OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 9.382e-35
Identity = 68/77 (88.31%), Postives = 74/77 (96.10%), Query Frame = -2
Query:  225 FPEFLNLMARKMKDXDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 455
            FPEFL +MARKMKD DSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEF
Sbjct:   55 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDSNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 131          
The following BLAST results are available for this feature:
BLAST of DC887882 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 309
Match NameE-valueIdentityDescription
CALM_ACHKL6.497e-3685.71Calmodulin OS=Achlya klebsiana GN=CMD1 PE=3 SV=3[more]
CALMB_HALRO6.497e-3684.52Calmodulin-B OS=Halocynthia roretzi PE=3 SV=3[more]
CALM_TETPY1.108e-3585.71Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4[more]
CML1_ORYSI1.447e-3586.90Calmodulin-like protein 1 OS=Oryza sativa subsp. i... [more]
CALM_SUBDO1.447e-3584.52Calmodulin OS=Suberites domuncula PE=2 SV=3[more]
CALM_PHYPO1.890e-3582.14Calmodulin OS=Physarum polycephalum PE=2 SV=3[more]
CALM_OREMO2.469e-3583.33Calmodulin OS=Oreochromis mossambicus GN=calm PE=2... [more]
CML1_ORYSJ4.211e-3585.71Calmodulin-like protein 1 OS=Oryza sativa subsp. j... [more]
CALM_ORYLA5.500e-3588.46Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm... [more]
CALN_CHICK9.382e-3588.31Neo-calmodulin (Fragment) OS=Gallus gallus PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionDC887882 EIC Citrus sinensis cDNA clone EIC1045 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887882 ID=DC887882; Name=DC887882; organism=Citrus sinensis; type=EST; length=459bp
GAGCGGAAAAAAACTAAAACATTAAAAAACTGAAAAGTTGCTCCAGTCAC
AAGACAAATTGAAGCAGGAGACAACATGCTTCCTTTAGCTTGACCTCAGA
GTTATCAAATTAAAATTTATAAAAAAGGAAACTAGGGAACCAATTATATT
AATCAACCAATTTCTTCTTTTCCCAGGAAGTTTTGGTTGGGTGGAGTCAC
TTACTTAGCCATCATAACCTTGACAAATTCCTCGTAATTTATCTGGCCAT
CACCATCGACATCAGCTTCCCTTATCATCTCATCGACTTCCTCATCAGTA
AGCTTCTCCCCTAGGTTTGTCATCACATGGCGCAGCTCAGCAGCTGAGAT
GAAACCATTCTGATCCTTGTCGAAAACCCGGAAGGCCTCTTTCAGCTCCT
CCTCAGAGTCGGNATCCTTCATCTTCCTGGCCATGAGGTTTAGGAATTCA
GGAAAAGCA
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