DC887873
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_YARLI (40S ribosomal protein S1 OS=Yarrowia lipolytica GN=RPS1 PE=3 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 4.661e-43 Identity = 89/134 (66.42%), Postives = 107/134 (79.85%), Query Frame = -3 Query: 280 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDR 681 SLVRKW TLIEA V VKT+D++ LRLF IGFTKR NQVK+T YAQTSQI QIR+KM +I+V +A++ L L K I EVIGREIEKAT +IYPLQNV+IRKVK+LK PKFDLG L+ +HG ++D G KV+R Sbjct: 112 SLVRKWQTLIEANVTVKTSDDYFLRLFVIGFTKRQANQVKKTTYAQTSQINQIRKKMTDIVVREASNVTLAQLTAKLIPEVIGREIEKATQNIYPLQNVYIRKVKLLKQPKFDLGALLALHGGATDDNGKKVNR 245
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_EMENI (40S ribosomal protein S1 OS=Emericella nidulans GN=rps1 PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 4.661e-43 Identity = 90/144 (62.50%), Postives = 111/144 (77.08%), Query Frame = -3 Query: 253 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRPADEPMPEA 681 SLVRKW +LIEA V VKTTD++ LRLF I FTKR PNQ+K+T YA++SQIR IR+KM EIM +A+SC L L K I EVIGREIEKAT IYPLQ+V IRKVK+LK+PKFDLG L+ +HG+ ++D G KV+R E + E+ Sbjct: 112 SLVRKWQSLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKMTEIMQREASSCSLAQLTSKLIPEVIGREIEKATQGIYPLQHVHIRKVKLLKSPKFDLGALLNLHGESTTDDKGQKVEREFKEQVLES 255
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_TALSN (40S ribosomal protein S1 OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=rps1 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.087e-43 Identity = 90/144 (62.50%), Postives = 111/144 (77.08%), Query Frame = -3 Query: 253 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRPADEPMPEA 681 SLVRKW +LIEA V VKTTD++ LRLF I FTKR PNQ+K+T YA++SQIR IR+KM EI+ +AASC L L K I EVIGREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ ++D G KV+R E + E+ Sbjct: 112 SLVRKWQSLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKMTEIIQREAASCTLSQLTTKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALLNLHGESTTDDQGHKVEREFKETVLES 255
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_NECH7 (40S ribosomal protein S1 OS=Nectria haematococca (strain 77-13-4 / FGSC 9596 / MPVI) GN=RPS1 PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.038e-42 Identity = 90/143 (62.94%), Postives = 109/143 (76.22%), Query Frame = -3 Query: 256 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVDRPADEPMPE 681 SLVRKW TLIEA V VKTTD++ +RLF I FTKR PNQ+K+T YA +SQIR IRRKM +I+ +A+SC L L K I EVIGREIEK+T IYPLQNV IRKVK+LK+PKFDLG LM +HG+ ++D G KV+R E + E Sbjct: 112 SLVRKWQTLIEANVTVKTTDDYLIRLFAIAFTKRRPNQIKKTTYAASSQIRAIRRKMTDIIQREASSCTLTQLTSKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALMALHGESGTDDQGQKVEREFKERVLE 254
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_PENMQ (40S ribosomal protein S1 OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) GN=rps1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.356e-42 Identity = 90/144 (62.50%), Postives = 110/144 (76.39%), Query Frame = -3 Query: 253 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRPADEPMPEA 681 SLVRKW +LIEA V VKTTD++ LRLF I FTKR PNQ+K+T YA +SQIR IR+KM EI+ +AASC L L K I EVIGREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ ++D G KV+R E + E+ Sbjct: 112 SLVRKWQSLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYAGSSQIRAIRKKMTEIIQREAASCTLSQLTTKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALLNLHGESTTDDQGHKVEREFKETVLES 255
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_PLAVI (40S ribosomal protein S3a OS=Plasmodium vivax GN=PVX_095080 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.313e-42 Identity = 85/132 (64.39%), Postives = 101/132 (76.52%), Query Frame = -3 Query: 286 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 681 SL+RK +TLIE Y DVKT DN+ LR+FCI FTK+ PNQ K TCYAQTSQI++IR+KM +IM A+A+ LK LV+KFI E IG+E+EK IYPLQNV IRKVKILK PK D+ KLME+H D ED G V Sbjct: 112 SLIRKGYTLIEGYTDVKTIDNYQLRMFCIAFTKKRPNQTKTTCYAQTSQIKKIRKKMVDIMNAEASKVMLKDLVKKFIPESIGKEVEKQCKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDSKEDAGKNV 243
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_NANOT (40S ribosomal protein S1 OS=Nannizzia otae (strain CBS 113480) GN=RPS1 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.313e-42 Identity = 91/144 (63.19%), Postives = 111/144 (77.08%), Query Frame = -3 Query: 253 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPMPEA 681 SLVRKW TLIEA V VKTTD++ +RLF I FTKR PNQ+K+T YAQ+SQIR IR+KM EI+ QA+SC L L K + EVIGREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ S +D G KV+R E + E+ Sbjct: 112 SLVRKWQTLIEANVTVKTTDDYLVRLFAIAFTKRRPNQIKKTTYAQSSQIRAIRKKMTEIIQRQASSCTLTQLT-KLVPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALLALHGEASTDDKGQKVEREFKEKVLES 254
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_PLAKH (40S ribosomal protein S3a OS=Plasmodium knowlesi (strain H) GN=PKH_081740 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.021e-42 Identity = 85/132 (64.39%), Postives = 101/132 (76.52%), Query Frame = -3 Query: 286 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKV 681 SL+RK +TLIE Y DVKT DN+ LR+FCI FTK+ PNQ K TCYAQTSQI++IR+KM +IM A+A+ LK LV+KFI E IG+E+EK IYPLQNV IRKVKILK PK D+ KLME+H D ED G V Sbjct: 112 SLIRKGYTLIEGYTDVKTIDNYQLRMFCIAFTKKRPNQTKTTCYAQTSQIKKIRKKMVDIMNAEASKVLLKDLVKKFIPESIGKEVEKQCKKIYPLQNVLIRKVKILKRPKLDISKLMELHTDSKEDAGKNV 243
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_PENCW (40S ribosomal protein S1 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=rps1 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.021e-42 Identity = 87/144 (60.42%), Postives = 111/144 (77.08%), Query Frame = -3 Query: 253 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD-YSEDVGVKVDRPADEPMPEA 681 SLVRKW +LIEA + VKTTD++ LRLF I FTKR PNQ+K+T YA++SQIR IR+KM EI+ +A++C L L K I EVIGREIEK+T IYPLQNV IRKVK+LK+PKFDLG L+ +HG+ ++D G KV+R E + E+ Sbjct: 112 SLVRKWQSLIEANITVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKMTEIIQREASTCTLSQLTHKLIPEVIGREIEKSTQGIYPLQNVHIRKVKLLKSPKFDLGALLALHGESATDDKGQKVEREFKETVLES 255
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_SCLS1 (40S ribosomal protein S1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rps1 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.946e-42 Identity = 89/143 (62.24%), Postives = 108/143 (75.52%), Query Frame = -3 Query: 256 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSED-VGVKVDRPADEPMPE 681 SLVRKW +LIEA + VKTTD++ LRLF I FTKR PNQ+K+T YA +SQIR IR+KM EI+ +A++C L L K I EVIGREIEKAT IYPLQNV IRKVK+LKAPKFDLG L+ +HG+ + D G KV+R E + E Sbjct: 112 SLVRKWQSLIEANITVKTTDDYLLRLFAIAFTKRRPNQIKKTTYAASSQIRAIRKKMTEIIQREASTCTLTQLTAKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKAPKFDLGALLNLHGESNTDEQGQKVEREFKEKVLE 254 The following BLAST results are available for this feature:
BLAST of DC887873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887873 ID=DC887873; Name=DC887873; organism=Citrus sinensis; type=EST; length=683bpback to top |