DC887873
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A2_DEBHA (40S ribosomal protein S1-B OS=Debaryomyces hansenii GN=RPS1B PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.896e-38 Identity = 79/144 (54.86%), Postives = 107/144 (74.31%), Query Frame = -3 Query: 253 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPMPEA 681 SLVRKW +L+EA V VKT+D++ LR+F I FTKR NQ+++T YAQ+S++R++R+KM EIM + ++C L L K I EVIGREIEK+T +I PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G KV + + EA Sbjct: 112 SLVRKWQSLVEANVTVKTSDDYVLRIFAIAFTKRQANQIRKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKVSAGFKDVVLEA 255
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_APLCA (40S ribosomal protein S3a OS=Aplysia californica GN=RPS3A PE=3 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38 Identity = 79/142 (55.63%), Postives = 104/142 (73.24%), Query Frame = -3 Query: 280 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS--------EDVGVKVDR 681 S+V+KW TLIEA VDVKTTD + LR+F IGFTK+ NQVK+TCYAQ +Q++ IR+KM EI+ + +S D+K +V K I + IG++IEK+ IYPL +V I KVK+LK PKFD+GKLME+HG+ S + G KVDR Sbjct: 112 SMVKKWQTLIEANVDVKTTDGYLLRVFAIGFTKKRNNQVKKTCYAQHAQVKAIRKKMVEIVSREVSSNDMKEVVNKLIPDSIGKDIEKSCQGIYPLHDVLIHKVKVLKKPKFDVGKLMELHGEGSTTTSKGVTSEGGEKVDR 253
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A1_DEBHA (40S ribosomal protein S1-A OS=Debaryomyces hansenii GN=RPS1A PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 7.700e-38 Identity = 77/133 (57.89%), Postives = 103/133 (77.44%), Query Frame = -3 Query: 286 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 681 SLVRKW +L+EA V VKT+D++ LR+F I FTKR NQ+++T YAQ+S++R++R+KM EIM + ++C L L K I EVIGREIEK+T +I PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G KV Sbjct: 112 SLVRKWQSLVEANVTVKTSDDYVLRIFAIAFTKRQANQIRKTTYAQSSKLREVRKKMIEIMQREVSNCTLAQLTSKLIPEVIGREIEKSTQTILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_LYSTE (40S ribosomal protein S3a OS=Lysiphlebus testaceipes PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.313e-37 Identity = 77/151 (50.99%), Postives = 102/151 (67.55%), Query Frame = -3 Query: 247 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE------DVGVKVDRPADEPMPEAPT 681 S+V+KW TLIEA+VDVKTTD + LR+FCIGFT++ ++T YAQ SQ+R IRRKM I+ + CDLK +V K + + I ++IEKA IYPL +V+IRKVK+LK P+F+L KL+E+HGD + G KVDRP P T Sbjct: 115 SMVKKWQTLIEAHVDVKTTDGYLLRIFCIGFTQKDQMSTRKTSYAQHSQVRNIRRKMVSIVTDEITKCDLKGVVTKLVPDAIAKDIEKACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGGSKTGEVGETGSKVDRPEGYEPPVQET 265
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_COCP7 (40S ribosomal protein S1 OS=Coccidioides posadasii (strain C735) GN=RPS1 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37 Identity = 87/144 (60.42%), Postives = 107/144 (74.31%), Query Frame = -3 Query: 253 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPMPEA 681 SLVRKW +LIEA V VKTTD++ +RLF I FTKR QVK+T YA++SQIR IR+KM EI+ +A+S L L K + EVIGREIEKAT IYPLQNV IRKVK+LK PKFDLG L+ +HG+ S +D G KV+R E + E+ Sbjct: 112 SLVRKWQSLIEANVTVKTTDDYLVRLFAIAFTKRRSFQVKKTTYARSSQIRAIRKKMVEIIQREASSRTLTQLT-KLVPEVIGREIEKATRGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGEASTDDKGQKVEREFTEQVLES 254
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_COCIM (40S ribosomal protein S1 OS=Coccidioides immitis GN=RPS1 PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37 Identity = 87/144 (60.42%), Postives = 107/144 (74.31%), Query Frame = -3 Query: 253 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVDRPADEPMPEA 681 SLVRKW +LIEA V VKTTD++ +RLF I FTKR QVK+T YA++SQIR IR+KM EI+ +A+S L L K + EVIGREIEKAT IYPLQNV IRKVK+LK PKFDLG L+ +HG+ S +D G KV+R E + E+ Sbjct: 112 SLVRKWQSLIEANVTVKTTDDYLVRLFAIAFTKRRSFQVKKTTYARSSQIRAIRKKMVEIIQREASSRTLTQLT-KLVPEVIGREIEKATRGIYPLQNVHIRKVKLLKQPKFDLGGLLALHGEASTDDKGQKVEREFTEQVLES 254
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A2_PICST (40S ribosomal protein S1-B OS=Pichia stipitis GN=RPS1B PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37 Identity = 78/134 (58.21%), Postives = 104/134 (77.61%), Query Frame = -3 Query: 283 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVD 681 SLVRKW +L+EA V VKT+D++ LR+F I FTKR NQ+K+T YAQ+S++R++R+KM EIM + ++ L L K I EVIGREIEK+T +I+PLQNV IRKVK+LK PKFDLG L+ +HG+ S E+ G KV+ Sbjct: 112 SLVRKWQSLVEANVTVKTSDDYVLRVFAIAFTKRQANQIKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQTIFPLQNVHIRKVKLLKQPKFDLGALLALHGEGSTEEKGKKVN 245
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_PERAM (40S ribosomal protein S3a OS=Periplaneta americana GN=Parcxpwex01 PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.240e-37 Identity = 77/148 (52.03%), Postives = 103/148 (69.59%), Query Frame = -3 Query: 247 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGD---YSEDVGVKVDRPADEPMPEAPT 681 S+V+KW TLIEA VDVKTTD + LR+FCIGFT + ++TCYAQ +Q+R IR+KM EI+ S DLK +V K + + I ++IEKA IYPL +V+IRKVK+LK P+F+L KL+E+HGD S++ G +VDRP P T Sbjct: 115 SMVKKWQTLIEANVDVKTTDGYLLRVFCIGFTNKDQMSQRKTCYAQHTQVRAIRKKMVEIITRDVTSSDLKEVVNKLLPDSIAKDIEKACQGIYPLHDVYIRKVKVLKKPRFELSKLLELHGDGKGGSDEPGARVDRPEGYEPPVQET 262
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A_ZYGRC (40S ribosomal protein S1 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=RPS1 PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.926e-37 Identity = 75/138 (54.35%), Postives = 97/138 (70.29%), Query Frame = -3 Query: 268 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADE 681 S+VRKW TLIEA V VKT+D + +R+F I FT++ PNQVK+TCYAQ+S IR IR+ EI+ + + L K I EVI +E+E AT I+PLQNV +RKVK+LK PKFDLG LM +HG+ S++ G KV DE Sbjct: 112 SMVRKWQTLIEAQVTVKTSDEYVIRVFAIAFTRKQPNQVKKTCYAQSSHIRAIRKVFSEILTREVQNSTLAQFTSKLIPEVINKEMENATKDIFPLQNVHVRKVKLLKQPKFDLGSLMALHGEGSDETGKKVSGFKDE 249
BLAST of DC887873 vs. ExPASy Swiss-Prot
Match: RS3A2_CLAL4 (40S ribosomal protein S1-B OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS1B PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.926e-37 Identity = 79/133 (59.40%), Postives = 101/133 (75.94%), Query Frame = -3 Query: 286 SLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKV 681 SLVRKW +L+EA V VKT D++ LR+F I FTKR NQVK+T YAQ+S++R++R+KM EIM + ++ L L K I EVIGREIEK+T SI PLQN+ IRKVK+LK PKFDLG L+ +HG+ S E+ G KV Sbjct: 112 SLVRKWQSLVEANVTVKTADDYVLRVFAIAFTKRQANQVKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQSILPLQNIHIRKVKLLKQPKFDLGSLLALHGEGSTEEKGKKV 244 The following BLAST results are available for this feature:
BLAST of DC887873 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 158
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887873 ID=DC887873; Name=DC887873; organism=Citrus sinensis; type=EST; length=683bpback to top |