CN185449
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185449 vs. ExPASy Swiss-Prot
Match: HS166_ORYSJ (16.6 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP16.6 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.236e-30 Identity = 74/151 (49.01%), Postives = 90/151 (59.60%), Query Frame = -2 Query: 254 RRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQE---EKNAKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 697 R NV DP S+D W D F + S A N R+DWKETP AHVF ADLPG+R +G +L ISGER++E++ + + +WH VERSSGKF RRFRLP A+V+QV ASM+NGVLTVT KAI ISG Sbjct: 5 RSGNVLDPMSVDFWADADPFGA-----VRSLAERCPVLTNVRVDWKETPTAHVFTADLPGVRKDQAKVEVEDGGVLVISGERAREEDVDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASMDNGVLTVTVPKEETKKPQLKAIPISG 150
BLAST of CN185449 vs. ExPASy Swiss-Prot
Match: HS189_ORYSJ (18.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.9 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.245e-25 Identity = 60/134 (44.78%), Postives = 85/134 (63.43%), Query Frame = -2 Query: 308 GGRRTNVFDPFSLDVWDPF-DGFLSSALTNAPSSARETSQF-ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNAKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 703 GG +P S+D+ +PF D +A APS+A + + A +DWKET AHVF AD+PG+R E ++L+ISG+R++ EEK +WHRVERSS +F+R RLP NA + V A+++NGVLT+T Sbjct: 26 GGGGGGEIEPVSVDIMEPFMDAISLTAFAAAPSAAAAAAGVPSTASMDWKETAAAHVFMADMPGVRREEVRVEVEEEKVLRISGQRARAAEEKGERWHRVERSSERFVRTVRLPPNANTDGVHAALDNGVLTIT 159
BLAST of CN185449 vs. ExPASy Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.799e-24 Identity = 51/90 (56.67%), Postives = 65/90 (72.22%), Query Frame = -2 Query: 308 ARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNAKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 577 AR+DWKETP+ HV D+PGL+ E R+L++SGER KE+E+K WHRVERS GKF R+FRLP N ++ VKA +ENGVLT+T Sbjct: 67 ARVDWKETPEGHVIMLDVPGLKREEIKVEVEENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTLT 156
BLAST of CN185449 vs. ExPASy Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.799e-24 Identity = 50/92 (54.35%), Postives = 67/92 (72.83%), Query Frame = -2 Query: 308 ANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNAKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 583 ++AR+DWKETP+ HV D+PGL+ E R+L++SGER KE+++K WHRVERS GKF R+F+LP N ++ VKA MENGVLT+T Sbjct: 73 SHARVDWKETPEGHVIMVDVPGLKKDDIKIEVEENRVLRVSGERKKEEDKKGDHWHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLT 164
BLAST of CN185449 vs. ExPASy Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.156e-22 Identity = 50/98 (51.02%), Postives = 68/98 (69.39%), Query Frame = -2 Query: 311 RETS-QFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNAKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 601 R+TS + AR+DWKET + H D+PGL+ E +L++SGER +E+E+K +WHRVERS GKF R+F+LPDN +E VKA +ENGVLT+ Sbjct: 62 RDTSVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTI 159
BLAST of CN185449 vs. ExPASy Swiss-Prot
Match: HSP12_SOYBN (Class I heat shock protein (Fragment) OS=Glycine max GN=HSP6834-A PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.579e-21 Identity = 54/74 (72.97%), Postives = 59/74 (79.73%), Query Frame = -2 Query: 254 ILQISGERSKEQEEKNAKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVTXXXXXXXXXXXKAIEISG 475 ILQISGER+ E+E+KN WHRVERSSGKF+R FRLPDNAKV+QVKASMENGVLTVT KAIEISG Sbjct: 1 ILQISGERNVEKEDKNDTWHRVERSSGKFMRSFRLPDNAKVDQVKASMENGVLTVTVPKEEIKKPDVKAIEISG 74
BLAST of CN185449 vs. ExPASy Swiss-Prot
Match: HS17B_ORYSJ (17.9 kDa heat shock protein 2 OS=Oryza sativa subsp. japonica GN=HSP17.9B PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.579e-21 Identity = 57/127 (44.88%), Postives = 81/127 (63.78%), Query Frame = -2 Query: 308 VFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLP-GLRXXXXXXXXXEGRILQISGERSKEQEEKNAKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 685 +FD + D W+PF F ++ +A A +TS FAN I+ +ET +A+VF+ADLP G++ EG +L I+GERS +EEK + H +ERS F RF LPD+A V+ V+ASM+ G+LTVT Sbjct: 6 LFDTLAFDAWNPFSIFGTTVAADA-WLASDTSAFANTYIESRETAEAYVFRADLPAGVKKEEVRVEVDEGNVLVITGERSVRREEKGQRSHHIERSCATFFGRFHLPDDAVVDLVRASMDGGMLTVT 131
BLAST of CN185449 vs. ExPASy Swiss-Prot
Match: HS219_ORYSJ (21.9 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP21.9 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.787e-18 Identity = 50/111 (45.05%), Postives = 69/111 (62.16%), Query Frame = -2 Query: 308 APSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEG-RILQISGERSK-------EQEEKNAKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 616 A ++A E + A AR DWKETP+AHV D+PG+R E R+L++SGER + E E +WHR ER++G+F RRFR+P A V +V A +++GVLTVT Sbjct: 59 AAAAAGEPAAVALARCDWKETPEAHVVTVDVPGVRRGDVRVEVDEASRVLRVSGERRRAGAAEEEEGERDGVRWHRAERAAGRFWRRFRMPPGADVGRVAARLDDGVLTVT 169
BLAST of CN185449 vs. ExPASy Swiss-Prot
Match: HS232_ORYSJ (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP23.2 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 8.110e-18 Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = -2 Query: 311 ETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQ--EEKNA--KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 598 + + + AR+DW+ET AH D+PG+R + R+L+ISGER +E+ E+K WHR ERS G+F R+ RLPDNA ++ + AS++NGVLTV Sbjct: 69 DVAMLSMARVDWRETGDAHEVVVDVPGMRKEDLRVEVEDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIAASLDNGVLTV 168
BLAST of CN185449 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.530e-16 Identity = 46/106 (43.40%), Postives = 65/106 (61.32%), Query Frame = -2 Query: 308 NAPSS--ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNAKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 619 NAPS R+ A D KE P ++VF D+PGL+ E +L ISGER +E+E++ AK+ R+ER GKF+R+F LP+NA + + A ++GVLTVT Sbjct: 30 NAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVT 135 The following BLAST results are available for this feature:
BLAST of CN185449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185449 ID=CN185449; Name=CN185449; organism=Citrus sinensis; type=EST; length=755bpback to top |