DC887870

Overview
NameDC887870
Unique NameDC887870
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM1_SOLTU (Calmodulin-1 OS=Solanum tuberosum GN=PCM1 PE=1 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 4.311e-47
Identity = 90/99 (90.91%), Postives = 97/99 (97.98%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMI+E DAD NGTIDFPEFLNLMARKMKDTDSEEELKEAF+VFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M+AK
Sbjct:   51 DMISEADADQNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVRMMLAK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_PROMN (Calmodulin OS=Prorocentrum minimum PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.631e-47
Identity = 92/99 (92.93%), Postives = 97/99 (97.98%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:   51 DMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_PFIPI (Calmodulin OS=Pfiesteria piscicida PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.631e-47
Identity = 92/99 (92.93%), Postives = 97/99 (97.98%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:   51 DMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_KARMI (Calmodulin OS=Karlodinium micrum PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.631e-47
Identity = 92/99 (92.93%), Postives = 97/99 (97.98%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:   51 DMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_ALEFU (Calmodulin OS=Alexandrium fundyense PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 5.631e-47
Identity = 92/99 (92.93%), Postives = 97/99 (97.98%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:   51 DMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_MACPY (Calmodulin OS=Macrocystis pyrifera PE=2 SV=3)

HSP 1 Score: 186.808 bits (473), Expect = 7.354e-47
Identity = 90/99 (90.91%), Postives = 96/99 (96.97%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MMAK
Sbjct:   51 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIIEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_METSE (Calmodulin OS=Metridium senile PE=1 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 9.605e-47
Identity = 89/99 (89.90%), Postives = 96/99 (96.97%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:   51 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_LUMRU (Calmodulin OS=Lumbricus rubellus PE=2 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 9.605e-47
Identity = 89/99 (89.90%), Postives = 96/99 (96.97%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +MM+K
Sbjct:   51 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMMSK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_SACJA (Calmodulin OS=Saccharina japonica GN=cam PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.254e-46
Identity = 89/99 (89.90%), Postives = 96/99 (96.97%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:   51 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_PYTSP (Calmodulin OS=Pythium splendens PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.254e-46
Identity = 89/99 (89.90%), Postives = 96/99 (96.97%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:   51 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149
The following BLAST results are available for this feature:
BLAST of DC887870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
CALM1_SOLTU4.311e-4790.91Calmodulin-1 OS=Solanum tuberosum GN=PCM1 PE=1 SV=... [more]
CALM_PROMN5.631e-4792.93Calmodulin OS=Prorocentrum minimum PE=2 SV=1[more]
CALM_PFIPI5.631e-4792.93Calmodulin OS=Pfiesteria piscicida PE=2 SV=1[more]
CALM_KARMI5.631e-4792.93Calmodulin OS=Karlodinium micrum PE=2 SV=1[more]
CALM_ALEFU5.631e-4792.93Calmodulin OS=Alexandrium fundyense PE=2 SV=1[more]
CALM_MACPY7.354e-4790.91Calmodulin OS=Macrocystis pyrifera PE=2 SV=3[more]
CALM_METSE9.605e-4789.90Calmodulin OS=Metridium senile PE=1 SV=3[more]
CALM_LUMRU9.605e-4789.90Calmodulin OS=Lumbricus rubellus PE=2 SV=3[more]
CALM_SACJA1.254e-4689.90Calmodulin OS=Saccharina japonica GN=cam PE=2 SV=1[more]
CALM_PYTSP1.254e-4689.90Calmodulin OS=Pythium splendens PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionDC887870 EIC Citrus sinensis cDNA clone EIC1024 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887870 ID=DC887870; Name=DC887870; organism=Citrus sinensis; type=EST; length=614bp
ACTATTTCGACCAAAAGAAAAATAAACATCGCAAGGGCAGAAATTAATGG
AAACACATTAAACAGACAACAACATTCATAGAACAGCAGAACAACTAAAA
TAATAAAAACCGAAAAGTTTTGCGAGTCACAAGACATATTGACGAGGGAG
ACAACATTCTTCCTACACCATCAGGCCCATCACCATTAAAAGACCATTGC
TTCCTTTAGCCTGACCCTCATGACTATCAAATTAAAAATTGTAAAAGAGA
AAACTAGGAATCCCTTTATAATTTAGTCAACCCATTTTATAAGTATTGGT
GGGTTGGGGTCATTACTTGGCCATCATAACCTTGACAAATTCCTCATAAT
TTATCTGGCCATCACCATCAACATCAGCTTCCCTTATCATCTCATCAACT
TCTTCATCAGTAAGTTTCTCTCCTAGGTTTGTCATCACATGGCGCAGCTC
AGCAGCTGAGATGAAACCATTCTGATCCTTGTCGAAAACCCGGAAGGCCT
CTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATCTTCCTGGCCATGAGG
TTTAGGAATTCAGGAAAATCAATAGTTCCATTACCATCAGCATCCACTTC
ATTGATCATGTCCT
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