DC887870

Overview
NameDC887870
Unique NameDC887870
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CANB2_HUMAN (Calcineurin subunit B type 2 OS=Homo sapiens GN=PPP3R2 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 3.812e-11
Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = -3
Query:  325 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL-GEKLTD----EEVDEMIREADVDGDGQINYEEFVKVM 609
            +I+  D DG+G +DF EF+   ++     D E++L+ AF ++D D++G+IS  EL  V+  + G  LTD    + VD+ I   D DGDG+I++EEF  V+
Sbjct:   58 VIDVFDTDGDGEVDFKEFILGTSQFSVKGDEEQKLRFAFSIYDMDKDGYISNGELFQVLKMMVGNNLTDWQLQQLVDKTIIILDKDGDGKISFEEFSAVV 157          
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CANB1_DROME (Calcineurin subunit B type 1 OS=Drosophila melanogaster GN=CanB PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.812e-11
Identity = 38/100 (38.00%), Postives = 60/100 (60.00%), Query Frame = -3
Query:  325 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 609
            +I+  DADGNG +DF EF+  +++     D   +L+ AFR++D D +G+IS  EL  V+      NL +    + VD+ I  AD D DG+I+++EF  V+
Sbjct:   58 VIDIFDADGNGEVDFKEFIQGVSQFSVRGDKLSKLRFAFRIYDMDNDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTICFADKDEDGKISFDEFCSVV 157          
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CML22_ORYSJ (Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica GN=CML22 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.979e-11
Identity = 41/110 (37.27%), Postives = 65/110 (59.09%), Query Frame = -3
Query:  325 MINEVDADGNGTIDFPEFLNLMARKM-----------KDTDSEEE--LKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVDEMIREADVDGDGQINYEEFVKVM 609
            +I  +DA+G+G +D  EF  L    M           K+ + EE+  ++EAFRVFD + +G+I+  EL  V+ +LG K   T EE   MI + D DGDG++++ EF+++M
Sbjct:  132 VIARIDANGDGCVDVEEFGELYRSIMAGGDDSKDGRAKEEEEEEDGDMREAFRVFDANGDGYITVDELGAVLASLGLKQGRTAEECRRMIGQVDRDGDGRVDFHEFLQMM 241          
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CML41_ARATH (Probable calcium-binding protein CML41 OS=Arabidopsis thaliana GN=CML41 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.503e-11
Identity = 36/101 (35.64%), Postives = 63/101 (62.38%), Query Frame = -3
Query:  325 DMINEVDADGNGTIDFPEFLNLMARKMK----DTDSEEELKEAFRVFDKDQ-NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 612
            + INEVD D +G++ F +F+ LM R+      + D + ELK AF +F+ ++ +G I+   L+ ++  LGE  T  E + MI+  D+DG+G +++ EF ++M
Sbjct:  103 EAINEVDTDADGSLGFEDFVGLMTRRDLYGDGEVDGDGELKTAFEMFEVEKGSGCITPKGLQKMLVKLGESRTYGECEAMIKFYDIDGNGILDFHEFRQMM 203          
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CDPKA_ARATH (Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.503e-11
Identity = 43/100 (43.00%), Postives = 62/100 (62.00%), Query Frame = -3
Query:  319 MINEV-DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTN-LGEKLTDEEV-DEMIREADVDGDGQINYEEFVKVMMA 609
            M+ EV D DGNG +D+ EF+ ++    K  +++E  K AF  FDKD + +I   ELR  + + LGE   D  V  +++RE D D DG+INY+EFV +M A
Sbjct:  407 MLMEVADVDGNGFLDYGEFVAVIIHLQK-IENDELFKLAFMFFDKDGSTYIELDELREALADELGEP--DASVLSDIMREVDTDKDGRINYDEFVTMMKA 503          
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CANB_YARLI (Calcineurin subunit B OS=Yarrowia lipolytica GN=CNB1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.503e-11
Identity = 36/96 (37.50%), Postives = 61/96 (63.54%), Query Frame = -3
Query:  337 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVM-----TNLGEKLTDEEVDEMIREADVDGDGQINYEEF 609
            +++  D + +G +DF EF+N ++      + +E+L+ AF+V+D D++G+IS  EL  V+      NL +    + VD+ I EAD DGDG+I++EEF
Sbjct:   60 LMDVFDENHSGDVDFQEFINGLSTFSTKGNKKEKLRFAFKVYDIDRDGYISNGELFIVLKMMVGNNLKDAQLQQIVDKTIMEADKDGDGKISFEEF 155          
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CETNB_DICDI (Centrin-B OS=Dictyostelium discoideum GN=cenB PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.493e-11
Identity = 35/90 (38.89%), Postives = 55/90 (61.11%), Query Frame = -3
Query:  316 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 585
            G  +I F  F  L++  +   DS   L++AF++F KD +G I+  +L+ V  N+GE+ +D ++ +MI  AD DGDG IN  EF+ +M  K
Sbjct:   59 GQKSISFNSFFELVSPYIPKRDSMSTLEQAFKLFVKDGSG-ITFKDLKKVAINIGEECSDSDLYDMIEFADTDGDGVINKSEFISLMTTK 147          
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CDPK3_PLAF7 (Calcium-dependent protein kinase 3 OS=Plasmodium falciparum (isolate 3D7) GN=CPK3 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 8.493e-11
Identity = 38/103 (36.89%), Postives = 66/103 (64.08%), Query Frame = -3
Query:  316 MINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEK--LTDEEVD---EMIREADVDGDGQINYEEFVKVMMAK 609
            +++++D+DG+G ID+ EF+   A   +   S++ +  AFRVFD D +G I+ AEL H++ N  +K  +T  +V+    MIR+ D + DG+I++ EF ++M  K
Sbjct:  461 LLDQIDSDGSGKIDYTEFI--AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMKLK 561          
The following BLAST results are available for this feature:
BLAST of DC887870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
CANB2_HUMAN3.812e-1139.00Calcineurin subunit B type 2 OS=Homo sapiens GN=PP... [more]
CANB1_DROME3.812e-1138.00Calcineurin subunit B type 1 OS=Drosophila melanog... [more]
CML22_ORYSJ4.979e-1137.27Probable calcium-binding protein CML22 OS=Oryza sa... [more]
CML41_ARATH6.503e-1135.64Probable calcium-binding protein CML41 OS=Arabidop... [more]
CDPKA_ARATH6.503e-1143.00Calcium-dependent protein kinase 10 OS=Arabidopsis... [more]
CANB_YARLI6.503e-1137.50Calcineurin subunit B OS=Yarrowia lipolytica GN=CN... [more]
CETNB_DICDI8.493e-1138.89Centrin-B OS=Dictyostelium discoideum GN=cenB PE=3... [more]
CDPK3_PLAF78.493e-1136.89Calcium-dependent protein kinase 3 OS=Plasmodium f... [more]

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Properties
Property NameValue
Genbank descriptionDC887870 EIC Citrus sinensis cDNA clone EIC1024 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887870 ID=DC887870; Name=DC887870; organism=Citrus sinensis; type=EST; length=614bp
ACTATTTCGACCAAAAGAAAAATAAACATCGCAAGGGCAGAAATTAATGG
AAACACATTAAACAGACAACAACATTCATAGAACAGCAGAACAACTAAAA
TAATAAAAACCGAAAAGTTTTGCGAGTCACAAGACATATTGACGAGGGAG
ACAACATTCTTCCTACACCATCAGGCCCATCACCATTAAAAGACCATTGC
TTCCTTTAGCCTGACCCTCATGACTATCAAATTAAAAATTGTAAAAGAGA
AAACTAGGAATCCCTTTATAATTTAGTCAACCCATTTTATAAGTATTGGT
GGGTTGGGGTCATTACTTGGCCATCATAACCTTGACAAATTCCTCATAAT
TTATCTGGCCATCACCATCAACATCAGCTTCCCTTATCATCTCATCAACT
TCTTCATCAGTAAGTTTCTCTCCTAGGTTTGTCATCACATGGCGCAGCTC
AGCAGCTGAGATGAAACCATTCTGATCCTTGTCGAAAACCCGGAAGGCCT
CTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATCTTCCTGGCCATGAGG
TTTAGGAATTCAGGAAAATCAATAGTTCCATTACCATCAGCATCCACTTC
ATTGATCATGTCCT
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