DC887870

Overview
NameDC887870
Unique NameDC887870
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
EICcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_PHYIN (Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.254e-46
Identity = 89/99 (89.90%), Postives = 96/99 (96.97%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE+ EAF+VFDKD NGFISAAELRH+MTNLGEKLTDEEVDEMIREAD+DGDGQINYEEFVK+MM+K
Sbjct:   51 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_HETTR (Calmodulin OS=Heterocapsa triquetra PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.254e-46
Identity = 91/99 (91.92%), Postives = 97/99 (97.98%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVD+DGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK+MMAK
Sbjct:   51 DMINEVDSDGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_EPIAK (Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 1.638e-46
Identity = 88/99 (88.89%), Postives = 96/99 (96.97%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   51 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQIMTAK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM3_SOLTU (Putative calmodulin-3 (Fragment) OS=Solanum tuberosum GN=PCM3 PE=5 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.140e-46
Identity = 92/99 (92.93%), Postives = 96/99 (96.97%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFLNLMARK+KDTD EEELKEAFRVFDKD+NGFISAAEL HVMTNLGEKLTDEEVDE+IREADVD DGQINY+EFVKVMMAK
Sbjct:   26 DMINEVDADGNGTIDFPEFLNLMARKIKDTDFEEELKEAFRVFDKDRNGFISAAELPHVMTNLGEKLTDEEVDEIIREADVDCDGQINYDEFVKVMMAK 124
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_XENLA (Calmodulin OS=Xenopus laevis GN=calm1 PE=1 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 2.795e-46
Identity = 88/99 (88.89%), Postives = 96/99 (96.97%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   51 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_TORCA (Calmodulin OS=Torpedo californica PE=1 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 2.795e-46
Identity = 88/99 (88.89%), Postives = 96/99 (96.97%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   51 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_SHEEP (Calmodulin OS=Ovis aries GN=CALM2 PE=2 SV=3)

HSP 1 Score: 184.882 bits (468), Expect = 2.795e-46
Identity = 88/99 (88.89%), Postives = 96/99 (96.97%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   51 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_RAT (Calmodulin OS=Rattus norvegicus GN=Calm1 PE=1 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 2.795e-46
Identity = 88/99 (88.89%), Postives = 96/99 (96.97%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   51 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_RABIT (Calmodulin OS=Oryctolagus cuniculus GN=CALM PE=1 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 2.795e-46
Identity = 88/99 (88.89%), Postives = 96/99 (96.97%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   51 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of DC887870 vs. ExPASy Swiss-Prot
Match: CALM_PONAB (Calmodulin OS=Pongo abelii GN=CALM PE=2 SV=3)

HSP 1 Score: 184.882 bits (468), Expect = 2.795e-46
Identity = 88/99 (88.89%), Postives = 96/99 (96.97%), Query Frame = -3 
Query:  316 DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 612
            DMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:   51 DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149
The following BLAST results are available for this feature:
BLAST of DC887870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 378
Match NameE-valueIdentityDescription
CALM_PHYIN1.254e-4689.90Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 ... [more]
CALM_HETTR1.254e-4691.92Calmodulin OS=Heterocapsa triquetra PE=2 SV=1[more]
CALM_EPIAK1.638e-4688.89Calmodulin OS=Epinephelus akaara GN=calm PE=2 SV=3[more]
CALM3_SOLTU2.140e-4692.93Putative calmodulin-3 (Fragment) OS=Solanum tubero... [more]
CALM_XENLA2.795e-4688.89Calmodulin OS=Xenopus laevis GN=calm1 PE=1 SV=2[more]
CALM_TORCA2.795e-4688.89Calmodulin OS=Torpedo californica PE=1 SV=2[more]
CALM_SHEEP2.795e-4688.89Calmodulin OS=Ovis aries GN=CALM2 PE=2 SV=3[more]
CALM_RAT2.795e-4688.89Calmodulin OS=Rattus norvegicus GN=Calm1 PE=1 SV=2[more]
CALM_RABIT2.795e-4688.89Calmodulin OS=Oryctolagus cuniculus GN=CALM PE=1 S... [more]
CALM_PONAB2.795e-4688.89Calmodulin OS=Pongo abelii GN=CALM PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionDC887870 EIC Citrus sinensis cDNA clone EIC1024 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC887870 ID=DC887870; Name=DC887870; organism=Citrus sinensis; type=EST; length=614bp
ACTATTTCGACCAAAAGAAAAATAAACATCGCAAGGGCAGAAATTAATGG
AAACACATTAAACAGACAACAACATTCATAGAACAGCAGAACAACTAAAA
TAATAAAAACCGAAAAGTTTTGCGAGTCACAAGACATATTGACGAGGGAG
ACAACATTCTTCCTACACCATCAGGCCCATCACCATTAAAAGACCATTGC
TTCCTTTAGCCTGACCCTCATGACTATCAAATTAAAAATTGTAAAAGAGA
AAACTAGGAATCCCTTTATAATTTAGTCAACCCATTTTATAAGTATTGGT
GGGTTGGGGTCATTACTTGGCCATCATAACCTTGACAAATTCCTCATAAT
TTATCTGGCCATCACCATCAACATCAGCTTCCCTTATCATCTCATCAACT
TCTTCATCAGTAAGTTTCTCTCCTAGGTTTGTCATCACATGGCGCAGCTC
AGCAGCTGAGATGAAACCATTCTGATCCTTGTCGAAAACCCGGAAGGCCT
CTTTCAGCTCCTCCTCAGAGTCGGTATCCTTCATCTTCCTGGCCATGAGG
TTTAGGAATTCAGGAAAATCAATAGTTCCATTACCATCAGCATCCACTTC
ATTGATCATGTCCT
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