CN185442

Overview
NameCN185442
Unique NameCN185442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2483 contig Csv1_Contig2483:1..768. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PRX2F_ARATH (Peroxiredoxin-2F, mitochondrial OS=Arabidopsis thaliana GN=PRXIIF PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.855e-25
Identity = 56/126 (44.44%), Postives = 81/126 (64.29%), Query Frame = -3
Query:  173 GKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESG-GDFTVSSADDIL 547
            GKKV++FG+PGA+T  CS +HVP +    D+ K+K +D ++C+SVN PF +  WA+      +++F  D   K+  +LGL+ DLS   LG RS R++  V+D KVKA NVE    DF V+ A+ IL
Sbjct:   73 GKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDPFAINGWAEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPRSERWSAYVEDGKVKAVNVEEAPSDFKVTGAEVIL 198          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PRDX5_MOUSE (Peroxiredoxin-5, mitochondrial OS=Mus musculus GN=Prdx5 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24
Identity = 69/165 (41.82%), Postives = 95/165 (57.58%), Query Frame = -3
Query:  164 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 649
            MAPI VGD +P        E +  ++V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A  LK+K    + C+SVN  FV++ W +       V+ LAD +  +  A  L LD S   L    R +RF++++D+  VKA NVE  G   T S A +IL  L
Sbjct:   49 MAPIKVGDAIPS---VEVFEGEPGKKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAGALKAKGAQVVACLSVNDVFVIEEWGRAHQAEGKVRLLADPTGAFGKATDLLLDDSLVSLFGNRRLKRFSMVIDNGIVKALNVEPDGTGLTCSLAPNILSQL 210          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PRDX5_BOVIN (Peroxiredoxin-5, mitochondrial OS=Bos taurus GN=PRDX5 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.679e-24
Identity = 68/165 (41.21%), Postives = 96/165 (58.18%), Query Frame = -3
Query:  164 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 649
            MAPI VGD +P        E++   +V++  L  GKK +LFG+PGAFTP CS  H+PGF+E+AD LK+K +  + C++VN  FV + WA+       V+ LAD S  +     L LD S   L    R +RF+++++D  VK+ NVE  G   T S A +IL  L
Sbjct:   58 MAPIKVGDAIPS---VEVFEKEPGNKVNLAELFKGKKGVLFGLPGAFTPGCSKTHLPGFVEQADALKAKGIQVVACLTVNDVFVTEEWARAHKAEGKVRLLADPSGTFGKETDLLLDDSLLFLFGNHRLKRFSMVIEDGIVKSLNVEPDGTGLTCSLAPNILSQL 219          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PMPA_CANBO (Putative peroxiredoxin-A OS=Candida boidinii GN=PMPA PE=1 SV=3)

HSP 1 Score: 110.153 bits (274), Expect = 1.330e-23
Identity = 67/167 (40.12%), Postives = 95/167 (56.89%), Query Frame = -3
Query:  164 MAPIAVGDPLPDGILAYF--DEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTF--PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLK-VKAANVESGGDFTVSSADDILKAL 649
            MAPI  GD  P     Y+   E  +   + +      KK ++  VPGAFTP C+ +H+PG+I+    + SK VD +L IS N PFV+K W K     + K + F++D + K T  LG  +DLS  GLGTRS R AL+V+    V+ A +E+GG+  VS+A  I+  L
Sbjct:    1 MAPIKRGDRFPTTDDVYYIPPEGGEPGPLELSKFVKTKKFVVVSVPGAFTPPCTEQHLPGYIKNLPRILSKGVDFVLVISQNDPFVLKGWKKELGAADAKKLVFVSDPNLKLTKKLGSTIDLSAIGLGTRSGRLALIVNRSGIVEYAAIENGGEVDVSTAQKIIAKL 167          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PRDX5_HUMAN (Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=PRDX5 PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 2.268e-23
Identity = 68/165 (41.21%), Postives = 92/165 (55.76%), Query Frame = -3
Query:  164 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 649
            MAPI VGD +P        E +   +V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A+ LK+K V  + C+SVN  FV   W +       V+ LAD +  +     L LD S   +    R +RF+++V D  VKA NVE  G   T S A +I+  L
Sbjct:   53 MAPIKVGDAIP---AVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 214          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PRDX5_CERAE (Peroxiredoxin-5, mitochondrial OS=Cercopithecus aethiops GN=PRDX5 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.868e-23
Identity = 68/165 (41.21%), Postives = 91/165 (55.15%), Query Frame = -3
Query:  164 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 649
            MAPI VGD +P        E +   +V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A+ LK+K V  + C+SVN  FV   W +       V+ LAD +  +     L LD S   +    R +RF+++V D  VKA NVE  G   T S A  I+  L
Sbjct:   54 MAPIKVGDAIP---AVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVLACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPSIISQL 215          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PRDX5_PAPHA (Peroxiredoxin-5, mitochondrial OS=Papio hamadryas GN=PRDX5 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23
Identity = 68/165 (41.21%), Postives = 91/165 (55.15%), Query Frame = -3
Query:  164 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 649
            MAPI VGD +P        E +   +V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A+ LK+K V  + C+SVN  FV   W +       V+ LAD +  +     L LD S   +    R +RF+++V D  VKA NVE  G   T S A  I+  L
Sbjct:   54 MAPIKVGDAIP---AVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVLACLSVNDAFVTGEWGRAHKVEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPSIISQL 215          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PMPB_CANBO (Putative peroxiredoxin-B OS=Candida boidinii GN=PMPB PE=1 SV=3)

HSP 1 Score: 108.227 bits (269), Expect = 5.052e-23
Identity = 66/167 (39.52%), Postives = 94/167 (56.29%), Query Frame = -3
Query:  164 MAPIAVGDPLPDGILAYF--DEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTF--PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLK-VKAANVESGGDFTVSSADDILKAL 649
            MAPI  GD  P     Y+   E  +     +      KK ++  VPGAFTP C+ +H+PG+I+    + SK VD +L I+ N PFV+K W K     + K + F++D + K T  LG  +DLS  GLGTRS R AL+V+    V+ A +E+GG+  VS+A  I+  L
Sbjct:    1 MAPIKRGDRFPTTDDVYYIPPEGGEPGAFELSKFVKTKKFVVVSVPGAFTPPCTEQHLPGYIKNLPRILSKGVDFVLVITQNDPFVLKGWKKELGAADAKKLIFVSDPNLKLTKKLGSTIDLSSIGLGTRSGRLALIVNRSGIVEYAAIENGGEVDVSTAQKIIAKL 167          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: PRDX5_RAT (Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus GN=Prdx5 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.507e-22
Identity = 67/165 (40.61%), Postives = 90/165 (54.55%), Query Frame = -3
Query:  164 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 649
            MAPI VGD +P        E +  ++V++  L   KK +LFGVPGAFTP CS  H+PGF+E+A  LK+K    + C+SVN  FV   W +       V+ LAD +  +     L LD S   L    R +RF++++D   VKA NVE  G   T S A +IL  L
Sbjct:   52 MAPIKVGDTIPS---VEVFEGEPGKKVNLAELFKDKKGVLFGVPGAFTPGCSKTHLPGFVEQAGALKAKGAQVVACLSVNDAFVTAEWGRAHQAEGKVQLLADPTGAFGKETDLLLDDSLVSLFGNRRLKRFSMVIDKGVVKALNVEPDGTGLTCSLAPNILSQL 213          
BLAST of CN185442 vs. ExPASy Swiss-Prot
Match: MALF2_MALFU (Putative peroxiredoxin OS=Malassezia furfur PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.528e-22
Identity = 58/166 (34.94%), Postives = 87/166 (52.41%), Query Frame = -3
Query:  173 AVGDPLPDGILAYFDEQDQLQQVSVHSLAA---------GKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNAPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVK--AANVESGGDFTVSSADDIL 637
            A G+ +PD ++ Y     +L    V  +           GKKV++  +PGA+TP C  +H+P  +++ DELK+K VD +  I+ N PFVM AW         V F  D    ++ ALG  +DLS K  G R+ R+AL++DD K+   A++    G    +S D IL
Sbjct:    9 AKGNEIPDTLMGYIPWTPELDSGEVCGIPTTFKTRDEWKGKKVVIVSIPGAYTPICHQQHIPPLVKRVDELKAKGVDAVYVIASNDPFVMAAWGNFNNAKDKVVFATDIDLAFSKALGATIDLSAKHFGERTARYALIIDDNKIVDFASDEGDTGKLQNASIDTIL 174          
The following BLAST results are available for this feature:
BLAST of CN185442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
PRX2F_ARATH1.855e-2544.44Peroxiredoxin-2F, mitochondrial OS=Arabidopsis tha... [more]
PRDX5_MOUSE2.679e-2441.82Peroxiredoxin-5, mitochondrial OS=Mus musculus GN=... [more]
PRDX5_BOVIN2.679e-2441.21Peroxiredoxin-5, mitochondrial OS=Bos taurus GN=PR... [more]
PMPA_CANBO1.330e-2340.12Putative peroxiredoxin-A OS=Candida boidinii GN=PM... [more]
PRDX5_HUMAN2.268e-2341.21Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=... [more]
PRDX5_CERAE3.868e-2341.21Peroxiredoxin-5, mitochondrial OS=Cercopithecus ae... [more]
PRDX5_PAPHA5.052e-2341.21Peroxiredoxin-5, mitochondrial OS=Papio hamadryas ... [more]
PMPB_CANBO5.052e-2339.52Putative peroxiredoxin-B OS=Candida boidinii GN=PM... [more]
PRDX5_RAT2.507e-2240.61Peroxiredoxin-5, mitochondrial OS=Rattus norvegicu... [more]
MALF2_MALFU9.528e-2234.94Putative peroxiredoxin OS=Malassezia furfur PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001F11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185442 ID=CN185442; Name=CN185442; organism=Citrus sinensis; type=EST; length=768bp
CCTTTATTCCGATAAAGATAAACAACAGTTTAAACCATTACTTCTCGCGT
CATACATAACAATATTCGAGATCCACTGGTTTATATTCATCCTAAGCATA
GCACAGCAAAAGGAAGTAATAACTCAACCAACACTAAGCAGCTGGGATGG
AACTGCAAATTTAAAGAGCCTTGAGGATGTCATCAGCACTGGAGACTGTG
AAATCTCCACCAGATTCAACATTTGCGGCCTTCACCTTGAGGTCATCAAC
CAAGAGAGCAAACCTCCTTGACCGGGTGCCAAGTCCTTTCTCACTGAGGT
CAAGCTCAAGCCCCAAAGCATGGGTGTATTTTGCTGAGCCATCAGCCAGG
AACTTCACGCTCTTGTTCTCAGGAAATGTTTTGGCCCATGCCTTCATCAC
AAATGGGGCATTAACGCTTATGCAGAGAATTTCATCGACGTCTTTTGACT
TCAACTCATCAGCCTTCTCGATGAATCCAGGCACATGCTTCAAGCTGCAA
GTAGGAGTGAAAGCACCGGGGACGCCAAAGAGGATGACCTTTTTACCGGC
AGCGAGCGAGTGTACGGACACTTGCTGCAACTGATCTTGTTCGTCGAAGT
AAGCGAGAATACCGTCCGGCAAGGGGTCACCAACTGCGATAGGAGCCATT
TAGAGATAGAATCTGATCCGCGCCTGTGATTAAATACACGATTACCACCG
TAGGGCGAGAGCTTTTTGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTAAAAAAAAAA
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