DC887865
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887865 vs. ExPASy Swiss-Prot
Match: RL7A_SULTO (50S ribosomal protein L7Ae OS=Sulfolobus tokodaii GN=rpl7ae PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.843e-12 Identity = 39/110 (35.45%), Postives = 62/110 (56.36%), Query Frame = -2 Query: 216 NLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKL 545 +L +LD V++A ++KKG NE TK + RG ++ +V+A D L E+K +PYV+VPSK+ALG ACG+ V A S + + K + ++ +E+L Sbjct: 14 DLANKVLDAVRKAKESGKIKKGTNETTKAVERGQAKLVVIATDVQPEEIVAHLPLLCEEKKIPYVYVPSKKALGEACGL--QVAAASAAIIDPGEAKDLLDEIVKRVEEL 121
BLAST of DC887865 vs. ExPASy Swiss-Prot
Match: NHP2_BOVIN (H/ACA ribonucleoprotein complex subunit 2 OS=Bos taurus GN=NHP2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.105e-12 Identity = 37/106 (34.91%), Postives = 55/106 (51.89%), Query Frame = -2 Query: 261 VNXKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 578 +N A PLA LT + +++A KQ+++G E K +N+G +V+A DT + ED+N+PYV++PSK LG A G RP V +E Q Sbjct: 31 LNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFINKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQ 136
BLAST of DC887865 vs. ExPASy Swiss-Prot
Match: NHP2_HUMAN (H/ACA ribonucleoprotein complex subunit 2 OS=Homo sapiens GN=NHP2 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.003e-12 Identity = 37/105 (35.24%), Postives = 54/105 (51.43%), Query Frame = -2 Query: 261 NXKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 575 N A PLA LT + +++A KQ+++G E K +N+G +V+A DT + ED+N+PYV++PSK LG A G RP V +E Q Sbjct: 32 NPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHEEYQ 136
BLAST of DC887865 vs. ExPASy Swiss-Prot
Match: NHP2_MOUSE (H/ACA ribonucleoprotein complex subunit 2 OS=Mus musculus GN=Nhp2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.146e-12 Identity = 38/106 (35.85%), Postives = 55/106 (51.89%), Query Frame = -2 Query: 261 VNXKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 578 +N A PLA LT + +++A KQ+++G E K +N+G +V+A DT L ED+N+PYV++PSK LG A G RP V +E Q Sbjct: 31 LNPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVLCEDQNLPYVYIPSKTDLGAATGSKRPTCVIMVKPHEEYQ 136
BLAST of DC887865 vs. ExPASy Swiss-Prot
Match: NHP2_XENLA (H/ACA ribonucleoprotein complex subunit 2-like protein OS=Xenopus laevis GN=nhp2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.560e-11 Identity = 42/132 (31.82%), Postives = 63/132 (47.73%), Query Frame = -2 Query: 261 TFVRFISCHKNP*PPSPATTKMTGEAVNXKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 656 T V+ C + P PS + ++ +N A PLA LT + V++A K +++G E K +N+G +VMA DT + ED+ +PY +VPSK LG A G RP + +E Q Sbjct: 2 TKVKKEECEEVPETPSKSYDELLSY-LNPVAKPLAGRKLTKKLYKCVKKAIKQKNIRRGVKEVQKFINKGEKGIVVMAGDTLPIEVYCHIPVMCEDRGIPYSYVPSKSDLGAAAGSKRPTCVILIKPHEDYQ 132
BLAST of DC887865 vs. ExPASy Swiss-Prot
Match: NHP2_PONAB (H/ACA ribonucleoprotein complex subunit 2 OS=Pongo abelii GN=NHP2 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.560e-11 Identity = 36/105 (34.29%), Postives = 54/105 (51.43%), Query Frame = -2 Query: 261 NXKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 575 N A PLA LT + +++A KQ+++G E K +N+G +V+A DT + ED+N+PYV++PSK LG A G RP V ++ Q Sbjct: 32 NPIAQPLASRRLTRKLYKCIKKAVKQKQIRRGVKEVQKFVNKGEKGIMVLAGDTLPIEVYCHLPVMCEDRNLPYVYIPSKTDLGAAAGSKRPTCVIMVKPHDEYQ 136 The following BLAST results are available for this feature:
BLAST of DC887865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DC887865 ID=DC887865; Name=DC887865; organism=Citrus sinensis; type=EST; length=672bpback to top |