CN185432

Overview
NameCN185432
Unique NameCN185432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_YARLI (Elongation factor 1-alpha OS=Yarrowia lipolytica GN=TEF PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.226e-52
Identity = 95/135 (70.37%), Postives = 117/135 (86.67%), Query Frame = -2
Query:  343 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 747
            NVKNV+VKD++RG VA +SK+DP +   +F +QVI++NHPGQIG GYAPVLDCHT+HIA KF  L+ KIDRR+GK++E  PKF+K+GDA +VKM+P+KPM VE F++YPPLGRFAVRDMRQTVAVGVIKSVEK D
Sbjct:  310 NVKNVSVKDIRRGNVAGDSKNDPPKGCDSFNAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFDTLIEKIDRRTGKKMEDSPKFIKSGDAAIVKMVPSKPMCVEAFTEYPPLGRFAVRDMRQTVAVGVIKSVEKSD 444          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A2_RABIT (Elongation factor 1-alpha 2 OS=Oryctolagus cuniculus GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.226e-52
Identity = 99/134 (73.88%), Postives = 116/134 (86.57%), Query Frame = -2
Query:  346 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 747
            NVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIK+VEKK
Sbjct:  311 NVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A2_HUMAN (Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF1A2 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.226e-52
Identity = 99/134 (73.88%), Postives = 116/134 (86.57%), Query Frame = -2
Query:  346 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 747
            NVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIK+VEKK
Sbjct:  311 NVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A2_BOVIN (Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A2 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.226e-52
Identity = 99/134 (73.88%), Postives = 116/134 (86.57%), Query Frame = -2
Query:  346 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 747
            NVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIK+VEKK
Sbjct:  311 NVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_ASPOR (Elongation factor 1-alpha OS=Aspergillus oryzae GN=tef1 PE=3 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.908e-52
Identity = 95/133 (71.43%), Postives = 119/133 (89.47%), Query Frame = -2
Query:  349 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 747
            NVKNV+VK+++RG VA +SK+DP     +F +QVI++NHPGQ+GNGYAPVLDCHT+HIA KF+EL+ KIDRR+GK +E +PKF+K+GDA +VKMIP+KPM VE+F+D+PPLGRFAVRDMRQTVAVGVIKSVEK
Sbjct:  310 NVKNVSVKEVRRGNVAGDSKNDPPAGCDSFNAQVIVLNHPGQVGNGYAPVLDCHTAHIACKFAELLEKIDRRTGKSVEDKPKFIKSGDAAIVKMIPSKPMCVESFTDFPPLGRFAVRDMRQTVAVGVIKSVEK 442          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_AJECG (Elongation factor 1-alpha OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=TEF PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.908e-52
Identity = 95/135 (70.37%), Postives = 117/135 (86.67%), Query Frame = -2
Query:  343 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 747
            NVKNV+VK+++RG VA +SK+DP +   +F +QVI++NHPGQ+G GYAPVLDCHT+HIA KFSEL+ KIDRR+GK +E  PKF+K+GDA +VKM+P+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIKSV K D
Sbjct:  310 NVKNVSVKEVRRGNVAGDSKNDPPKGCESFNAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELIEKIDRRTGKSVENNPKFIKSGDAAIVKMVPSKPMCVEPFTDYPPLGRFAVRDMRQTVAVGVIKSVIKSD 444          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A3_HUMAN (Putative elongation factor 1-alpha-like 3 OS=Homo sapiens GN=EEF1AL3 PE=5 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.908e-52
Identity = 100/133 (75.19%), Postives = 116/133 (87.22%), Query Frame = -2
Query:  346 VKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 744
            VKNV+VKD++RG VA +SK+DP  EAA FT+QVII+NHPGQI  GYAPVLDCH +HIA KF+EL  KIDRRSGK+LE  PKFLK+GDA +V M+P KPM VE+FSDYPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  312 VKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLDCHMAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_STYLE (Elongation factor 1-alpha OS=Stylonychia lemnae GN=EFAA PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.797e-52
Identity = 93/134 (69.40%), Postives = 118/134 (88.06%), Query Frame = -2
Query:  343 VKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 744
            VKN++VKDL+RG+VAS+SK+DPA++  NF +QVI++NHPGQI  GYAPVLDCHT+HIA KF E+ +K+DRRSGK LE+EPKF+K+G+A +V+M+P KPM VE F+ YPPLGRFAVRDM+QTVAVGVIK V KK+
Sbjct:  300 VKNLSVKDLRRGYVASDSKNDPAKDTTNFLAQVIVLNHPGQIQKGYAPVLDCHTAHIACKFDEIESKVDRRSGKVLEEEPKFIKSGEAALVRMVPQKPMCVEAFNQYPPLGRFAVRDMKQTVAVGVIKEVVKKE 433          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_PODAN (Elongation factor 1-alpha OS=Podospora anserina GN=TEF PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.797e-52
Identity = 95/133 (71.43%), Postives = 118/133 (88.72%), Query Frame = -2
Query:  349 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 747
            NVKNV+VK+++RG VA +SK+DP   AA+F +QVI++NHPGQ+G GYAPVLDCHT+HIA KFSEL+ KIDRR+GK +E+ PKF+K+GDA +VKM+P+KPM VE F++YPPLGRFAVRDMRQTVAVGVIK VEK
Sbjct:  310 NVKNVSVKEIRRGNVAGDSKNDPPMGAASFDAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELLQKIDRRTGKAVEESPKFIKSGDAAIVKMVPSKPMCVEAFTEYPPLGRFAVRDMRQTVAVGVIKKVEK 442          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A4_OSCTI (Elongation factor 1-alpha 4 OS=Oscheius tipulae GN=eft-4 PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.797e-52
Identity = 96/135 (71.11%), Postives = 118/135 (87.41%), Query Frame = -2
Query:  343 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 747
            N KNV+VKD++RG V S+SK+DPA+E+ +FT+QVI+MNHPGQIG GY PVLDCHT+HIA KF+EL  K+DRR+GK++E  PKFLK+GDAG+V++IPTKP+ VE F+DY PLGRFAVRDMRQTVAVGVIK V K D
Sbjct:  311 NEKNVSVKDIRRGSVCSDSKNDPAKESKSFTAQVIVMNHPGQIGAGYTPVLDCHTAHIACKFAELKEKVDRRTGKKVEDLPKFLKSGDAGIVELIPTKPLCVEAFTDYAPLGRFAVRDMRQTVAVGVIKGVTKDD 445          
The following BLAST results are available for this feature:
BLAST of CN185432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
EF1A_YARLI2.226e-5270.37Elongation factor 1-alpha OS=Yarrowia lipolytica G... [more]
EF1A2_RABIT2.226e-5273.88Elongation factor 1-alpha 2 OS=Oryctolagus cunicul... [more]
EF1A2_HUMAN2.226e-5273.88Elongation factor 1-alpha 2 OS=Homo sapiens GN=EEF... [more]
EF1A2_BOVIN2.226e-5273.88Elongation factor 1-alpha 2 OS=Bos taurus GN=EEF1A... [more]
EF1A_ASPOR2.908e-5271.43Elongation factor 1-alpha OS=Aspergillus oryzae GN... [more]
EF1A_AJECG2.908e-5270.37Elongation factor 1-alpha OS=Ajellomyces capsulata... [more]
EF1A3_HUMAN2.908e-5275.19Putative elongation factor 1-alpha-like 3 OS=Homo ... [more]
EF1A_STYLE3.797e-5269.40Elongation factor 1-alpha OS=Stylonychia lemnae GN... [more]
EF1A_PODAN3.797e-5271.43Elongation factor 1-alpha OS=Podospora anserina GN... [more]
EF1A4_OSCTI3.797e-5271.11Elongation factor 1-alpha 4 OS=Oscheius tipulae GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001F06_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185432 ID=CN185432; Name=CN185432; organism=Citrus sinensis; type=EST; length=748bp
CCCCCTTTTTACCATGAAAACAGTCGCCCATTCTCTCAGGCAAAATTTAA
TACAACACCTACAAAATATATGAGCACCGACTAAATTTTCAAAATCGACC
ACTAACGGCTAATCTTGAAACAAAATGTTTGACATCCAAAAACTGGTTTA
TCAACTTACCAAAAAAAACTCAATGATATAAAACCAAATTCAGAGAATTA
AAATGAAGTCTACCGTAAAACAAACTAAAACATGACAAAAATAGCATAAA
CAGAGAAAATAAAAGCTAACTATAGCAGATAGATCCCAAAAAACTCCTCA
CTTCTTCTTGGCAGCAGACTTGGTGACCTTGGCACCCGATGGATCCTTCT
TTTCAACACTCTTGATCACACCAACAGCTACAGTCTGACGCATGTCCCTA
ACAGCAAAACGACCAAGGGGTGGGTAGTCGGAGAAGGTCTCAACAACCAT
GGGCTTGGTGGGAATCATCTTAACCATTCCGGCATCTCCATTCTTCAAGA
ACTTGGGCTCCTTCTCAAGCTCCTTGCCAGATCGCCTGTCAATCTTGGTC
ACAAGCTCAGAAAACTTGACAGCAATGTGGGAGGTGTGGCAGTCAAGCAC
TGGGGCATATCCATTTCCAATCTGGCCAGGATGGTTCATGATGATGACCT
GTGAAGTGAAGTTGGCAGCTTCCCTGGCCGGATCATCCTTCGAGTTGGAA
GCAACAAAACCACGCTTGAGATCCTTGACAGCAACGTTCTTCACGTTG
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