CN185432

Overview
NameCN185432
Unique NameCN185432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A2_RAT (Elongation factor 1-alpha 2 OS=Rattus norvegicus GN=Eef1a2 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.797e-52
Identity = 99/134 (73.88%), Postives = 116/134 (86.57%), Query Frame = -2
Query:  346 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 747
            NVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIK+VEKK
Sbjct:  311 NVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A2_MOUSE (Elongation factor 1-alpha 2 OS=Mus musculus GN=Eef1a2 PE=1 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.797e-52
Identity = 99/134 (73.88%), Postives = 116/134 (86.57%), Query Frame = -2
Query:  346 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 747
            NVKNV+VKD++RG V  +SK DP +EAA FTSQVII+NHPGQI  GY+PV+DCHT+HIA KF+EL  KIDRRSGK+LE  PK LK+GDA +V+M+P KPM VE+FS YPPLGRFAVRDMRQTVAVGVIK+VEKK
Sbjct:  311 NVKNVSVKDIRRGNVCGDSKADPPQEAAQFTSQVIILNHPGQISAGYSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLGRFAVRDMRQTVAVGVIKNVEKK 444          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_PUCGR (Elongation factor 1-alpha OS=Puccinia graminis GN=TEF PE=3 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 4.960e-52
Identity = 97/135 (71.85%), Postives = 116/135 (85.93%), Query Frame = -2
Query:  343 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 747
            NVKNV+VKD++RG V  ++K DP +EAA+F +QVI++NHPGQIGNGY PVLDCHT+HIA KF  L  KIDRR+GK LE+ PKF+K+GDA +VKM+P+K M VE F+DYPPLGRFAVRDMRQTVAVGVIKSVEK D
Sbjct:  308 NVKNVSVKDIRRGNVCGDTKCDPPKEAASFVAQVIVLNHPGQIGNGYCPVLDCHTAHIACKFDTLQQKIDRRTGKALEEAPKFVKSGDACLVKMVPSKAMCVEPFADYPPLGRFAVRDMRQTVAVGVIKSVEKTD 442          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_ARTSA (Elongation factor 1-alpha OS=Artemia salina PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 4.960e-52
Identity = 94/136 (69.12%), Postives = 118/136 (86.76%), Query Frame = -2
Query:  340 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDP 747
            NVKNV+VK+L+RG+VAS+SK++PAR + +F +QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K DRR+GK  E EPKF+K+GDA M+ ++P+KP+ VE FSD+PPLGRFAVRDMRQTVAVGVIKSV  KDP
Sbjct:  311 NVKNVSVKELRRGYVASDSKNNPARGSQDFFAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEAEPKFIKSGDAAMITLVPSKPLCVEAFSDFPPLGRFAVRDMRQTVAVGVIKSVNFKDP 446          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_PODCU (Elongation factor 1-alpha OS=Podospora curvicolla GN=TEF PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 8.460e-52
Identity = 95/133 (71.43%), Postives = 118/133 (88.72%), Query Frame = -2
Query:  349 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 747
            NVKNV+VK+++RG VA +SK+DP   AA+F +QVI++NHPGQ+G GYAPVLDCHT+HIA KF+EL+ KIDRR+GK +E+ PKF+K+GDA +VKMIP+KPM VE F++YPPLGRFAVRDMRQTVAVGVIK VEK
Sbjct:  310 NVKNVSVKEIRRGNVAGDSKNDPPLGAASFDAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFAELLQKIDRRTGKAVEESPKFIKSGDAAIVKMIPSKPMCVEAFTEYPPLGRFAVRDMRQTVAVGVIKKVEK 442          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_CANAL (Elongation factor 1-alpha OS=Candida albicans GN=TEF1 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 8.460e-52
Identity = 95/135 (70.37%), Postives = 116/135 (85.93%), Query Frame = -2
Query:  343 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 747
            NVKNV+VK+++RG V  +SK+DP +   +F +QVI++NHPGQI  GY+PVLDCHT+HIA KF  LV KIDRR+GK+LE+ PKF+K+GDA +VKM+PTKPM VE F+DYPPLGRFAVRDMRQTVAVGVIKSVEK D
Sbjct:  309 NVKNVSVKEIRRGNVCGDSKNDPPKGCDSFNAQVIVLNHPGQISAGYSPVLDCHTAHIACKFDTLVEKIDRRTGKKLEENPKFVKSGDAAIVKMVPTKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKSD 443          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_ARXAD (Elongation factor 1-alpha OS=Arxula adeninivorans GN=TEF PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 8.460e-52
Identity = 96/135 (71.11%), Postives = 117/135 (86.67%), Query Frame = -2
Query:  343 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 747
            NVKNV+VK+++RG VA +SK+DP +   +FT+QVII NHPGQI  GY+PVLDCHT+HIA +F EL+ KIDRRSGK++E  PKF+K GDA +V+MIP+KPM VETF++YPPLGRFAVRDMRQTVAVGVIKSVEK D
Sbjct:  309 NVKNVSVKEIRRGNVAGDSKNDPPKGCDSFTAQVIIFNHPGQISAGYSPVLDCHTAHIACRFDELIEKIDRRSGKKVEDSPKFVKAGDAAIVRMIPSKPMCVETFTEYPPLGRFAVRDMRQTVAVGVIKSVEKSD 443          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A2_SCHPO (Elongation factor 1-alpha-B/C OS=Schizosaccharomyces pombe GN=tef1b PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.215e-51
Identity = 95/136 (69.85%), Postives = 117/136 (86.03%), Query Frame = -2
Query:  340 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDP 747
            NVKNV+VKD++RG V  +SK+DP    A+FT+QVII+NHPGQI  GY+PVLDCHT+HIA KF+EL+ KIDRRSGK++E+ PKF+K+GDA + KM+P+KPM VE F+DY PLGRFAVRDMRQTVAVGVIK+VEK  P
Sbjct:  309 NVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIKAVEKVAP 444          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A1_SCHPO (Elongation factor 1-alpha-A OS=Schizosaccharomyces pombe GN=tef1a PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 3.215e-51
Identity = 95/136 (69.85%), Postives = 117/136 (86.03%), Query Frame = -2
Query:  340 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKDP 747
            NVKNV+VKD++RG V  +SK+DP    A+FT+QVII+NHPGQI  GY+PVLDCHT+HIA KF+EL+ KIDRRSGK++E+ PKF+K+GDA + KM+P+KPM VE F+DY PLGRFAVRDMRQTVAVGVIK+VEK  P
Sbjct:  309 NVKNVSVKDIRRGNVCGDSKNDPPMGCASFTAQVIILNHPGQISAGYSPVLDCHTAHIACKFAELIEKIDRRSGKKIEESPKFVKSGDACIAKMVPSKPMCVEAFTDYAPLGRFAVRDMRQTVAVGVIKAVEKVAP 444          
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_PICGU (Elongation factor 1-alpha OS=Pichia guilliermondii GN=TEF1 PE=3 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 4.199e-51
Identity = 93/135 (68.89%), Postives = 116/135 (85.93%), Query Frame = -2
Query:  343 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKKD 747
            NVKNV+VK+++RG V  +SK+DP +   +FT+QVI++NHPGQI  GY+PVLDCHT+HIA KF  L+ KIDRR+GK++E  PKF+K+GDA +VKM+P+KPM VE F+DYPPLGRFAVRDMRQTVAVGVIKSVEK D
Sbjct:  309 NVKNVSVKEIRRGNVCGDSKNDPPKGCDSFTAQVIVLNHPGQISAGYSPVLDCHTAHIACKFDTLLEKIDRRTGKKMEDNPKFVKSGDASIVKMVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVEKSD 443          
The following BLAST results are available for this feature:
BLAST of CN185432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
EF1A2_RAT3.797e-5273.88Elongation factor 1-alpha 2 OS=Rattus norvegicus G... [more]
EF1A2_MOUSE3.797e-5273.88Elongation factor 1-alpha 2 OS=Mus musculus GN=Eef... [more]
EF1A_PUCGR4.960e-5271.85Elongation factor 1-alpha OS=Puccinia graminis GN=... [more]
EF1A_ARTSA4.960e-5269.12Elongation factor 1-alpha OS=Artemia salina PE=1 S... [more]
EF1A_PODCU8.460e-5271.43Elongation factor 1-alpha OS=Podospora curvicolla ... [more]
EF1A_CANAL8.460e-5270.37Elongation factor 1-alpha OS=Candida albicans GN=T... [more]
EF1A_ARXAD8.460e-5271.11Elongation factor 1-alpha OS=Arxula adeninivorans ... [more]
EF1A2_SCHPO3.215e-5169.85Elongation factor 1-alpha-B/C OS=Schizosaccharomyc... [more]
EF1A1_SCHPO3.215e-5169.85Elongation factor 1-alpha-A OS=Schizosaccharomyces... [more]
EF1A_PICGU4.199e-5168.89Elongation factor 1-alpha OS=Pichia guilliermondii... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001F06_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185432 ID=CN185432; Name=CN185432; organism=Citrus sinensis; type=EST; length=748bp
CCCCCTTTTTACCATGAAAACAGTCGCCCATTCTCTCAGGCAAAATTTAA
TACAACACCTACAAAATATATGAGCACCGACTAAATTTTCAAAATCGACC
ACTAACGGCTAATCTTGAAACAAAATGTTTGACATCCAAAAACTGGTTTA
TCAACTTACCAAAAAAAACTCAATGATATAAAACCAAATTCAGAGAATTA
AAATGAAGTCTACCGTAAAACAAACTAAAACATGACAAAAATAGCATAAA
CAGAGAAAATAAAAGCTAACTATAGCAGATAGATCCCAAAAAACTCCTCA
CTTCTTCTTGGCAGCAGACTTGGTGACCTTGGCACCCGATGGATCCTTCT
TTTCAACACTCTTGATCACACCAACAGCTACAGTCTGACGCATGTCCCTA
ACAGCAAAACGACCAAGGGGTGGGTAGTCGGAGAAGGTCTCAACAACCAT
GGGCTTGGTGGGAATCATCTTAACCATTCCGGCATCTCCATTCTTCAAGA
ACTTGGGCTCCTTCTCAAGCTCCTTGCCAGATCGCCTGTCAATCTTGGTC
ACAAGCTCAGAAAACTTGACAGCAATGTGGGAGGTGTGGCAGTCAAGCAC
TGGGGCATATCCATTTCCAATCTGGCCAGGATGGTTCATGATGATGACCT
GTGAAGTGAAGTTGGCAGCTTCCCTGGCCGGATCATCCTTCGAGTTGGAA
GCAACAAAACCACGCTTGAGATCCTTGACAGCAACGTTCTTCACGTTG
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