CN185432

Overview
NameCN185432
Unique NameCN185432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2325 contig Csv1_Contig2325:10..757. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_HELGL (Elongation factor 1-alpha (Fragment) OS=Helicoverpa gelotopoeon PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.939e-41
Identity = 73/117 (62.39%), Postives = 100/117 (85.47%), Query Frame = -2 
Query:  397 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 747
            NVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  297 NVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_HELDI (Elongation factor 1-alpha (Fragment) OS=Heliocheilus discalis PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.939e-41
Identity = 73/117 (62.39%), Postives = 100/117 (85.47%), Query Frame = -2 
Query:  397 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 747
            NVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  297 NVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_HELAM (Elongation factor 1-alpha (Fragment) OS=Helicoverpa armigera PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.939e-41
Identity = 73/117 (62.39%), Postives = 100/117 (85.47%), Query Frame = -2 
Query:  397 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 747
            NVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  297 NVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_HELAL (Elongation factor 1-alpha (Fragment) OS=Heliocheilus albipunctella PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.939e-41
Identity = 73/117 (62.39%), Postives = 100/117 (85.47%), Query Frame = -2 
Query:  397 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 747
            NVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  297 NVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_ANIIF (Elongation factor 1-alpha (Fragment) OS=Anicla infecta PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.939e-41
Identity = 73/117 (62.39%), Postives = 100/117 (85.47%), Query Frame = -2 
Query:  397 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 747
            NVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  297 NVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_ADIBE (Elongation factor 1-alpha (Fragment) OS=Adisura bella PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.939e-41
Identity = 73/117 (62.39%), Postives = 100/117 (85.47%), Query Frame = -2 
Query:  397 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 747
            NVKNV+VK+L+RG+VA +SK++P + AA+FT+QVI++NHPGQI NGY PVLDCHT+HIA KF+E+  K+DRR+GK  E  PK +K+GDA +V ++P+KP+ VE+F ++PPLGRFAVR
Sbjct:  297 NVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEDNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRFAVR 413
[Close]
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_BLAHO (Elongation factor 1-alpha OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.815e-39
Identity = 75/130 (57.69%), Postives = 103/130 (79.23%), Query Frame = -2 
Query:  358 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKS 747
            NV NV+V+D+ RG V  ++K+DP  +  +  +QVI+MNHP  I  GY PV+DCHT+HIA KF ++++++D+R+GK L + P  +KNG + M +++P+KPM VETFSDYPPLGRFAVRDMRQTVAVG+IKS
Sbjct:  301 NVNNVSVEDIHRGNVCGDAKNDPPCKTES-DAQVIVMNHPSGIRPGYCPVVDCHTAHIACKFEKIMSEMDKRTGKVLRENPDIVKNGKSMMAQLVPSKPMCVETFSDYPPLGRFAVRDMRQTVAVGIIKS 429
[Close]
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A2_EUPCR (Elongation factor 1-alpha 2 OS=Euplotes crassus GN=EFA2 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.886e-37
Identity = 70/127 (55.12%), Postives = 98/127 (77.17%), Query Frame = -2 
Query:  346 KDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEKK 726
            K++K G V  ++K+DP + A +F +QVI+MNHPG I  GY PVLD HT+H+A KF  L++K + R+GK +E+ PKFLKNG++G+V+++PTKP+ VE FS Y  LGRF +RDM++TVAVGVI+ V  K
Sbjct:  303 KEIKAGHVCGDAKNDPPKNAESFIAQVIVMNHPGHIKAGYQPVLDIHTAHVATKFKTLLSKNEARTGKLIEEAPKFLKNGESGIVELVPTKPLCVEEFSKYAALGRFVIRDMKRTVAVGVIQEVIHK 429
[Close]
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_SULSO (Elongation factor 1-alpha OS=Sulfolobus solfataricus GN=tuf PE=1 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 2.829e-31
Identity = 64/132 (48.48%), Postives = 93/132 (70.45%), Query Frame = -2 
Query:  352 NVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVE 747
            NV+ V  KD+KRG V  +  + P   A  FT+++I++ HP  + NGY PV+  HT+ +A + SELV+K+D R+G+E EK P+FLK GD  +VK  P KP+ VE ++++PPLGRFA+RDM +TV VG+I  V+
Sbjct:  298 NVRGVEKKDIKRGDVVGHPNNPPT-VADEFTARIIVVWHPTALANGYTPVIHVHTASVACRVSELVSKLDPRTGQEAEKNPQFLKQGDVAIVKFKPIKPLCVEKYNEFPPLGRFAMRDMGKTVGVGIIVDVK 428
[Close]
BLAST of CN185432 vs. ExPASy Swiss-Prot
Match: EF1A_THESM (Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tuf PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.303e-31
Identity = 63/135 (46.67%), Postives = 93/135 (68.89%), Query Frame = -2 
Query:  349 NVKNVAVKDLKRGFVASNSKDDPA--REAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKSVEK 747
            NV+ V   D+KRG VA ++ + P   R    F +Q+I++NHP  I  GY PVL  HT+ +AV+F +L+ K+D R+G  +E+ P+F+K GD+ +V + PTKPMV+E   + P LGRFA+RDM QTVA G++ S++K
Sbjct:  292 NVRGVGKNDIKRGDVAGHTTNPPTVVRPRDTFKAQIIVLNHPTAITIGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKELPQLGRFAIRDMGQTVAAGMVISIQK 426
The following BLAST results are available for this feature:
BLAST of CN185432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
EF1A_HELGL3.939e-4162.39Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELDI3.939e-4162.39Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_HELAM3.939e-4162.39Elongation factor 1-alpha (Fragment) OS=Helicoverp... [more]
EF1A_HELAL3.939e-4162.39Elongation factor 1-alpha (Fragment) OS=Heliocheil... [more]
EF1A_ANIIF3.939e-4162.39Elongation factor 1-alpha (Fragment) OS=Anicla inf... [more]
EF1A_ADIBE3.939e-4162.39Elongation factor 1-alpha (Fragment) OS=Adisura be... [more]
EF1A_BLAHO4.815e-3957.69Elongation factor 1-alpha OS=Blastocystis hominis ... [more]
EF1A2_EUPCR5.886e-3755.12Elongation factor 1-alpha 2 OS=Euplotes crassus GN... [more]
EF1A_SULSO2.829e-3148.48Elongation factor 1-alpha OS=Sulfolobus solfataric... [more]
EF1A_THESM6.303e-3146.67Elongation factor 1-alpha OS=Thermococcus sibiricu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001F06_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001F06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185432 ID=CN185432; Name=CN185432; organism=Citrus sinensis; type=EST; length=748bp
CCCCCTTTTTACCATGAAAACAGTCGCCCATTCTCTCAGGCAAAATTTAA
TACAACACCTACAAAATATATGAGCACCGACTAAATTTTCAAAATCGACC
ACTAACGGCTAATCTTGAAACAAAATGTTTGACATCCAAAAACTGGTTTA
TCAACTTACCAAAAAAAACTCAATGATATAAAACCAAATTCAGAGAATTA
AAATGAAGTCTACCGTAAAACAAACTAAAACATGACAAAAATAGCATAAA
CAGAGAAAATAAAAGCTAACTATAGCAGATAGATCCCAAAAAACTCCTCA
CTTCTTCTTGGCAGCAGACTTGGTGACCTTGGCACCCGATGGATCCTTCT
TTTCAACACTCTTGATCACACCAACAGCTACAGTCTGACGCATGTCCCTA
ACAGCAAAACGACCAAGGGGTGGGTAGTCGGAGAAGGTCTCAACAACCAT
GGGCTTGGTGGGAATCATCTTAACCATTCCGGCATCTCCATTCTTCAAGA
ACTTGGGCTCCTTCTCAAGCTCCTTGCCAGATCGCCTGTCAATCTTGGTC
ACAAGCTCAGAAAACTTGACAGCAATGTGGGAGGTGTGGCAGTCAAGCAC
TGGGGCATATCCATTTCCAATCTGGCCAGGATGGTTCATGATGATGACCT
GTGAAGTGAAGTTGGCAGCTTCCCTGGCCGGATCATCCTTCGAGTTGGAA
GCAACAAAACCACGCTTGAGATCCTTGACAGCAACGTTCTTCACGTTG
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