DC887856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887856 vs. ExPASy Swiss-Prot
Match: PPR24_ARATH (Pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E25 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.171e-11 Identity = 28/82 (34.15%), Postives = 56/82 (68.29%), Query Frame = -1 Query: 353 DLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRI 598 ++ IE VW LLG+C ++ + ELAER +++L ELE ++ G+YVL+++++ + + +R ++ ++ RG+ K+PG S++ Sbjct: 422 EIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
BLAST of DC887856 vs. ExPASy Swiss-Prot
Match: PP214_ARATH (Putative pentatricopeptide repeat-containing protein At3g05240 OS=Arabidopsis thaliana GN=PCMP-E82 PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11 Identity = 30/80 (37.50%), Postives = 50/80 (62.50%), Query Frame = -1 Query: 350 IEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIE 589 ++P +WG+LL C IH N+EL +R + E E +G YVLL+++YA A W +VK ++ ++++ + KV G S +E Sbjct: 483 VKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
BLAST of DC887856 vs. ExPASy Swiss-Prot
Match: PP148_ARATH (Pentatricopeptide repeat-containing protein At2g04860 OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 2.836e-11 Identity = 31/79 (39.24%), Postives = 51/79 (64.56%), Query Frame = -1 Query: 353 IEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRI 589 I+P VWG+LL +C IH +E+ E ++++F L+ N G YVL++++YA MWD+V RV+ +++ G G S+I Sbjct: 564 IKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 642
BLAST of DC887856 vs. ExPASy Swiss-Prot
Match: PP146_ARATH (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.837e-11 Identity = 29/84 (34.52%), Postives = 52/84 (61.90%), Query Frame = -1 Query: 350 EDLRIEPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIE 601 E + I+P + +G+ L C +H +L E K++ +L P +A YVL++++YA+ W++ K V+ L++ RGL K+ G S +E Sbjct: 606 EKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
BLAST of DC887856 vs. ExPASy Swiss-Prot
Match: PPR88_ARATH (Pentatricopeptide repeat-containing protein At1g62260, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E10 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.317e-11 Identity = 32/79 (40.51%), Postives = 52/79 (65.82%), Query Frame = -1 Query: 350 EPGPKVWGSLLGSCRIHCNVELAERASKRLFELEPTNAGNYVLLADVYAAADMWDEVKRVKRLLEARGLQKVPGRSRIE 586 EP VWG+LL +CRI+ NV LA A++ + LEP ++ YVLL ++YA +WDE +V+ +E++ ++K G S ++ Sbjct: 575 EPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653 The following BLAST results are available for this feature:
BLAST of DC887856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 155
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887856 ID=DC887856; Name=DC887856; organism=Citrus sinensis; type=EST; length=601bpback to top |