CN185388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185388 vs. ExPASy Swiss-Prot
Match: NTF2_CLAHE (Nuclear transport factor 2 OS=Cladosporium herbarum GN=NTF2 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.069e-27 Identity = 60/121 (49.59%), Postives = 81/121 (66.94%), Query Frame = 1 Query: 136 DPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLNY 498 D +++A+ F E YY TFD +R LA LY+E SMLTFE G+ NIV KL LPFQ+ +H + TVD QPS +GG+LV VSG L + E+ + ++Q F L+P G++YV ND+FRL Y Sbjct: 3 DFNAIAQQFTEFYYKTFDTDRAQLAPLYRENSMLTFEQSPFLGTANIVGKLQELPFQRIEHQVATVDAQPSNESGGILVVVSGALLVEEERRPMSYTQTFQLLPA-DGAYYVFNDVFRLVY 122
BLAST of CN185388 vs. ExPASy Swiss-Prot
Match: NTF2_YARLI (Nuclear transport factor 2 OS=Yarrowia lipolytica GN=NTF2 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.426e-24 Identity = 60/122 (49.18%), Postives = 85/122 (69.67%), Query Frame = 1 Query: 133 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGG-MLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLN 495 +D +++AK F E YY TFD +R+ L NLY++ SMLTF G + QG+Q IV KL LPF Q +H I+ +D QP+ GG ++V V+G L + G+ + L ++Q+FHL+P S+YV NDIFRLN Sbjct: 3 VDFNTLAKQFCEFYYQTFDTDRSQLGNLYRDHSMLTFTGTQHQGAQAIVEKLVGLPFGQVRHKISDIDAQPASAQGGDVIVLVTGELCVDGD-NPLPYAQVFHLIP-DGSSYYVFNDIFRLN 122
BLAST of CN185388 vs. ExPASy Swiss-Prot
Match: NTF2_NEUCR (Nuclear transport factor 2 OS=Neurospora crassa GN=ntf-2 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.432e-24 Identity = 56/120 (46.67%), Postives = 78/120 (65.00%), Query Frame = 1 Query: 133 MDPDSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 492 +D ++A FV HYY+TFD++R LA LY++ SMLTFEG + G+Q I KLTSLPFQ+ +H D QP+ GG+++ V+G L + EQ L +SQ F L G ++V NDIF+L Sbjct: 3 LDFTAIATQFVAHYYSTFDSDRKNLAGLYRDNSMLTFEGAQSLGAQGITEKLTSLPFQKVKHEYGPPDAQPTA-TGGIIILVTGQLIVDDEQRPLGYSQAFQLSQDASGQWFVFNDIFKL 121
BLAST of CN185388 vs. ExPASy Swiss-Prot
Match: NTF2_DICDI (Nuclear transport factor 2 OS=Dictyostelium discoideum GN=nutf2 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.783e-20 Identity = 54/123 (43.90%), Postives = 79/123 (64.23%), Query Frame = 1 Query: 133 MDPD--SVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGE-QHALKFSQMFHLMPTPQGSFYVLNDIFRL 492 +DP V K FVEHYY FD+NR GL +YQ+ + LT+EG+ + G+ IV + LPFQQ I ++DCQ + G+++ V+G L + GE ++ LKF Q+F+L + GSF ++ND FRL Sbjct: 4 VDPQVVGVGKQFVEHYYGIFDSNRAGLTQIYQQQTTLTWEGKFLSGADAIVKHIVELPFQQTNRKINSIDCQQTYQP-GIMITVTGTLIIDGEAKNQLKFVQVFNL-ASNNGSFLLINDFFRL 124
BLAST of CN185388 vs. ExPASy Swiss-Prot
Match: NTF2_CAEEL (Probable nuclear transport factor 2 OS=Caenorhabditis elegans GN=ran-4 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.527e-18 Identity = 57/132 (43.18%), Postives = 81/132 (61.36%), Query Frame = 1 Query: 118 LKFNQMDPDSVAKAFVEHYYTTFD-----ANRTGLANLYQ-EGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRLN 495 + FN D +SVAKAF++HYY+ FD + GL++LY E S +TFEGQ+ +G I+ K T+L F + Q +IT +D QP G + V V G L+ E FSQ+F L P QGS+++ N+IFRL+ Sbjct: 1 MSFNP-DYESVAKAFIQHYYSKFDVGDGMSRAQGLSDLYDPENSYMTFEGQQAKGRDGILQKFTTLGFTKIQRAITVIDSQPLYD-GSIQVMVLGQLK-TDEDPINPFSQVFILRPNNQGSYFIGNEIFRLD 129
BLAST of CN185388 vs. ExPASy Swiss-Prot
Match: NTF2_RAT (Nuclear transport factor 2 OS=Rattus norvegicus GN=Nutf2 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17 Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 142 DSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 492 + + +F++HYY FD +RT L +Y + S LT+EGQ+ QG IV KL+SLPFQ+ QHSIT D QP+ P ++ V G L+ A E + F QMF L+ ++ ND+FRL Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPT-PDSCIISMVVGQLK-ADEDPIMGFHQMF-LLKNINDAWVCTNDMFRL 121
BLAST of CN185388 vs. ExPASy Swiss-Prot
Match: NTF2_PONAB (Nuclear transport factor 2 OS=Pongo abelii GN=NUTF2 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17 Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 142 DSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 492 + + +F++HYY FD +RT L +Y + S LT+EGQ+ QG IV KL+SLPFQ+ QHSIT D QP+ P ++ V G L+ A E + F QMF L+ ++ ND+FRL Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPT-PDSCIISMVVGQLK-ADEDPIMGFHQMF-LLKNINDAWVCTNDMFRL 121
BLAST of CN185388 vs. ExPASy Swiss-Prot
Match: NTF2_MOUSE (Nuclear transport factor 2 OS=Mus musculus GN=Nutf2 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17 Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 142 DSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 492 + + +F++HYY FD +RT L +Y + S LT+EGQ+ QG IV KL+SLPFQ+ QHSIT D QP+ P ++ V G L+ A E + F QMF L+ ++ ND+FRL Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPT-PDSCIISMVVGQLK-ADEDPIMGFHQMF-LLKNINDAWVCTNDMFRL 121
BLAST of CN185388 vs. ExPASy Swiss-Prot
Match: NTF2_HUMAN (Nuclear transport factor 2 OS=Homo sapiens GN=NUTF2 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17 Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 142 DSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 492 + + +F++HYY FD +RT L +Y + S LT+EGQ+ QG IV KL+SLPFQ+ QHSIT D QP+ P ++ V G L+ A E + F QMF L+ ++ ND+FRL Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPT-PDSCIISMVVGQLK-ADEDPIMGFHQMF-LLKNINDAWVCTNDMFRL 121
BLAST of CN185388 vs. ExPASy Swiss-Prot
Match: NTF2_BOVIN (Nuclear transport factor 2 OS=Bos taurus GN=NUTF2 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17 Identity = 51/117 (43.59%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 142 DSVAKAFVEHYYTTFDANRTGLANLYQEGSMLTFEGQKIQGSQNIVAKLTSLPFQQCQHSITTVDCQPSGPAGGMLVFVSGNLQLAGEQHALKFSQMFHLMPTPQGSFYVLNDIFRL 492 + + +F++HYY FD +RT L +Y + S LT+EGQ+ QG IV KL+SLPFQ+ QHSIT D QP+ P ++ V G L+ A E + F QMF L+ ++ ND+FRL Sbjct: 8 EQIGSSFIQHYYQLFDNDRTQLGAIYIDASCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPT-PDSCIISMVVGQLK-ADEDPIMGFHQMF-LLKNINDAWVCTNDMFRL 121 The following BLAST results are available for this feature:
BLAST of CN185388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185388 ID=CN185388; Name=CN185388; organism=Citrus sinensis; type=EST; length=728bpback to top |