CN185387

Overview
NameCN185387
Unique NameCN185387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length828
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: MRCKB_HUMAN (Serine/threonine-protein kinase MRCK beta OS=Homo sapiens GN=CDC42BPB PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.160e-13
Identity = 50/167 (29.94%), Postives = 81/167 (48.50%), Query Frame = -1
Query:  319 KIVNWKTCLKFPEE-PKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPWRKMLTSKDTNFIGYTFKKSDVLKSLENSGTDMRSNGSSK---VPSLISLLGRIDVQETAISECDQQKQE 807
            KI+N +   +FP     +S+EA+DLI  L+C  E RLG  G+E+ K+H +F G+ W+ +  +EA Y P V+   DT NF+   +V      +P         +     FIG+TF          +  + M+SN  +K   V   +    +++  E  I   +Q+K E
Sbjct:  292 KIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDVLRNTEILPPGS--HTGFSGLHLPFIGFTFTTESCFSDRGSLKSIMQSNTLTKDEDVQRDLEHSLQMEAYERRIRRLEQEKLE 456          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: MRCKB_RAT (Serine/threonine-protein kinase MRCK beta OS=Rattus norvegicus GN=Cdc42bpb PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.039e-13
Identity = 50/167 (29.94%), Postives = 81/167 (48.50%), Query Frame = -1
Query:  319 KIVNWKTCLKFPEE-PKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPWRKMLTSKDTNFIGYTFKKSDVLKSLENSGTDMRSNGSSK---VPSLISLLGRIDVQETAISECDQQKQE 807
            KI+N +   +FP     +S+EA+DLI  L+C  E RLG  G+E+ K+H +F G+ W+ +  +EA Y P V+   DT NF+   +V      +P         +     FIG+TF          +  + ++SN  +K   V   +    +I+  E  I   +Q+K E
Sbjct:  292 KIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDVLRNIEILPPGS--HTGFSGLHLPFIGFTFTTESCFSDRGSLKSMIQSNTLTKDEDVQRDLENSLQIEAYERRIRRLEQEKLE 456          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: LATS2_HUMAN (Serine/threonine-protein kinase LATS2 OS=Homo sapiens GN=LATS2 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 9.193e-13
Identity = 34/84 (40.48%), Postives = 50/84 (59.52%), Query Frame = -1
Query:  559 KIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDK-LYEMEAAYKPTVNGELDTQNFEKFPE 807
            K++NW+  L  P + K+S EARDLI  L C  + RLG  G ++LK HP+F  I +   + +  A Y PT++  +DT NF+   E
Sbjct:  924 KVINWENTLHIPAQVKLSPEARDLITKLCCSADHRLGRNGADDLKAHPFFSAIDFSSDIRKQPAPYVPTISHPMDTSNFDPVDE 1007          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: COT1_NEUCR (Serine/threonine-protein kinase cot-1 OS=Neurospora crassa GN=cot-1 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.201e-12
Identity = 40/126 (31.75%), Postives = 66/126 (52.38%), Query Frame = -1
Query:  457 KIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNF--EKFPEVDG-------PPSEIPSVGPWRKMLTSKDTNFIGYTFKKSD 807
            KIVNW+  L FP++  +  +A +LI  L+C+ E RLG  G  E+K H +FRG+++D L  + A ++P +   +DT  F  ++  + D          +   +    ++        FIGYTFK+ D
Sbjct:  469 KIVNWRHSLYFPDDITLGVDAENLIRSLICNTENRLGRGGAHEIKSHAFFRGVEFDSLRRIRAPFEPRLTSAIDTTYFPTDEIDQTDNATLLKAQQAARGAAAPAQQEESPELSLPFIGYTFKRFD 594          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: SAX1_CAEBR (Serine/threonine-protein kinase sax-1 OS=Caenorhabditis briggsae GN=sax-1 PE=3 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.568e-12
Identity = 44/124 (35.48%), Postives = 66/124 (53.23%), Query Frame = -1
Query:  451 KIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRG-VEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVD--GPPSEI--PSVGPWRKMLTSKDTNFIGYTFKKSDVL 807
            K++NW+  L FP +  IS EA+  I    C+ E RLG  G ++E+K+ P+FR I W+ + E     + TV    DT NF+ FP+ D   P S +  P   P R+        F+ +T+K+ D L
Sbjct:  331 KVINWQQTLVFPSDVPISIEAKATIKRFCCEAERRLGNHGGLDEIKQCPFFRRIDWNHIRERPPPIRVTVKSIDDTSNFDDFPDEDLSWPTSTLIRPEEQPGRR------GEFVDFTYKRFDGL 448          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: MRCKB_MOUSE (Serine/threonine-protein kinase MRCK beta OS=Mus musculus GN=Cdc42bpb PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.048e-12
Identity = 52/170 (30.59%), Postives = 82/170 (48.24%), Query Frame = -1
Query:  319 KIVNWKTCLKFPEE-PKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPWRKMLTSKDTNFIGYTFKKSDV------LKSLENSGTDMRSNGSSKVPSLISLLGRIDVQETAISECDQQKQE 807
            KI+N +   +FP     +S+EA+DLI  L+C  E RLG  G+E+ K+H +F G+ W+ +  +EA Y P V+   DT NF+   ++      +P         +     FIG+TF           LKS+  S T  +     +   L + L +I+  E  I   +Q+K E
Sbjct:  292 KIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDMLRNIEILPPGS--HTGFSGLHLPFIGFTFTTESCFSDRGSLKSMTQSNTLTKDEDVQR--DLENSL-QIEAYERRIRRLEQEKLE 456          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: LATS2_MOUSE (Serine/threonine-protein kinase LATS2 OS=Mus musculus GN=Lats2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.493e-12
Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = -1
Query:  559 KIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDK-LYEMEAAYKPTVNGELDTQNFEKFPE 807
            K++NW++ L  P + ++S EARDLI  L C  + RLG  G ++LK HP+F  I + + + +  A Y PT++  +DT NF+   E
Sbjct:  882 KVINWESTLHIPTQVRLSAEARDLITKLCCAADCRLGRDGADDLKAHPFFNTIDFSRDIRKQPAPYVPTISHPMDTSNFDPVDE 965          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: MRCKG_MOUSE (Serine/threonine-protein kinase MRCK gamma OS=Mus musculus GN=Cdc42bpg PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.959e-12
Identity = 37/114 (32.46%), Postives = 61/114 (53.51%), Query Frame = -1
Query:  469 KIVNWKTCLKFPEE-PKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPWRKMLTSKDTNFIGYTF 807
            KI+N +  L+FP +   +   A+DLI  LLC  E RLG  G+++ ++HP+F G+ W++L    A Y P + G +DT NF+   +    P  +P         +     F+G+T+
Sbjct:  287 KIMNHEDHLQFPADVTDVPASAQDLIRQLLCRQEERLGRGGLDDFRKHPFFEGVDWERLATSTAPYIPELRGPMDTSNFDVDDDTLNRPETLPPSS--HGAFSGHHLPFVGFTY 398          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: SAX1_CAEEL (Serine/threonine-protein kinase sax-1 OS=Caenorhabditis elegans GN=sax-1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.264e-11
Identity = 42/124 (33.87%), Postives = 65/124 (52.42%), Query Frame = -1
Query:  451 KIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTR-GVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVD--GPPSEI--PSVGPWRKMLTSKDTNFIGYTFKKSDVL 807
            K++NW+  L FP +  IS EA+  I    C+ E RLG   G++E+K+ P+ + I W+ + E     + TV    DT NF+ FP+ D   P S +  P   P R+        F+ +T+K+ D L
Sbjct:  331 KVINWQQTLVFPSDVPISIEAKATIKRFCCEAERRLGNHGGLDEIKQCPFVKRIDWNHIRERPPPIRVTVKSIDDTSNFDDFPDEDLTWPTSTLIRPEEQPGRR------GEFVDFTYKRFDGL 448          
BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: Y1558_DICDI (Probable serine/threonine-protein kinase DDB_G0278845 OS=Dictyostelium discoideum GN=DDB_G0278845 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.862e-11
Identity = 34/86 (39.53%), Postives = 54/86 (62.79%), Query Frame = -1
Query:  553 IVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGT--RGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVD 804
            ++ WKT L+ P+   +SDE  DLI  L+ D  TRLG+  +GVE +K H +F G+ W KL++++  + P + G+ DT  FE   ++D
Sbjct: 1034 VLKWKTMLQRPDG--VSDELWDLISGLINDGSTRLGSGEKGVENIKNHIFFNGVPWGKLHDLDPPFVPLLQGDYDTTYFENTEKLD 1117          
The following BLAST results are available for this feature:
BLAST of CN185387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
MRCKB_HUMAN3.160e-1329.94Serine/threonine-protein kinase MRCK beta OS=Homo ... [more]
MRCKB_RAT7.039e-1329.94Serine/threonine-protein kinase MRCK beta OS=Rattu... [more]
LATS2_HUMAN9.193e-1340.48Serine/threonine-protein kinase LATS2 OS=Homo sapi... [more]
COT1_NEUCR1.201e-1231.75Serine/threonine-protein kinase cot-1 OS=Neurospor... [more]
SAX1_CAEBR1.568e-1235.48Serine/threonine-protein kinase sax-1 OS=Caenorhab... [more]
MRCKB_MOUSE2.048e-1230.59Serine/threonine-protein kinase MRCK beta OS=Mus m... [more]
LATS2_MOUSE3.493e-1239.29Serine/threonine-protein kinase LATS2 OS=Mus muscu... [more]
MRCKG_MOUSE5.959e-1232.46Serine/threonine-protein kinase MRCK gamma OS=Mus ... [more]
SAX1_CAEEL2.264e-1133.87Serine/threonine-protein kinase sax-1 OS=Caenorhab... [more]
Y1558_DICDI3.862e-1139.53Probable serine/threonine-protein kinase DDB_G0278... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001E05_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185387 ID=CN185387; Name=CN185387; organism=Citrus sinensis; type=EST; length=828bp
TTTTTTTTTTTTTTTTTGAGCTTAATCCAGGCTTTACATTAGCTCTTATT
TATTATATCAGTATAAGAAAGAATTGAACATATTTTCGGGCTTCACAGTA
ACTCTGATAGATGACATTTGCAGTACGAAAAAAAAAGAATTACGCTTGAG
ATCACATCGACTTTTAGGCTGACCTCCTTATTCTCGGGTCGTTACTCCCC
ACAGTTCTTTGCCATAATCGGTTTTTATACAAAACCTGCTTTTGAAGGTT
ATACACGCAATGGAATAAAAATAGGAACGGAACTCCCGAATAAGTAAAAC
AGAATGATCCACTCAGGTTTCCTGCTTCTGCTGATCACACTCTGAAATGG
CAGTTTCCTGCACGTCAATCCTACCTAACAAAGAAATCAAAGAGGGAACT
TTTGATGATCCATTCGACCTCATGTCCGTACCTGAATTTTCAAGTGATTT
AAGGACATCAGATTTCTTAAATGTATATCCGATAAAATTGGTATCTTTTG
ATGTCAGCATCTTTCTCCAAGGTCCCACACTTGGTATCTCCGATGGTGGG
CCGTCTACTTCTGGAAACTTCTCAAAATTCTGAGTATCCAGCTCCCCATT
GACTGTAGGCTTATATGCAGCTTCCATTTCATACAACTTGTCCCATTGGA
TTCCTCTGAACCATGGATGTTCCTTCAATTCTTCAACTCCTCTGGTTCCA
AGCCTTGTCTCAACATCACAGAGCAAGTGACAAATCAGATCCCTAGCCTC
ATCTGATATTTTTGGTTCTTCAGGGAATTTCAGGCATGTTTTCCAATTGA
CTATCTTGGCGGCATGTGATCCTTGGAT
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