CN185387

Overview
NameCN185387
Unique NameCN185387
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length828
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN185387 vs. ExPASy Swiss-Prot
Match: LATS1_HUMAN (Serine/threonine-protein kinase LATS1 OS=Homo sapiens GN=LATS1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.588e-11
Identity = 33/80 (41.25%), Postives = 47/80 (58.75%), Query Frame = -1 
Query:  571 KIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDK-LYEMEAAYKPTVNGELDTQNFE 807
            K++NW+T L  P + K+S EA DLI  L    E RLG  G +E+K HP+F+ I +   L +  A+Y P +    DT NF+
Sbjct:  961 KVINWQTSLHIPPQAKLSPEASDLIIKLCRGPEDRLGKNGADEIKAHPFFKTIDFSSDLRQQSASYIPKITHPTDTSNFD 1040
The following BLAST results are available for this feature:
BLAST of CN185387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
LATS1_HUMAN6.588e-1141.25Serine/threonine-protein kinase LATS1 OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001E05_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001E05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185387 ID=CN185387; Name=CN185387; organism=Citrus sinensis; type=EST; length=828bp
TTTTTTTTTTTTTTTTTGAGCTTAATCCAGGCTTTACATTAGCTCTTATT
TATTATATCAGTATAAGAAAGAATTGAACATATTTTCGGGCTTCACAGTA
ACTCTGATAGATGACATTTGCAGTACGAAAAAAAAAGAATTACGCTTGAG
ATCACATCGACTTTTAGGCTGACCTCCTTATTCTCGGGTCGTTACTCCCC
ACAGTTCTTTGCCATAATCGGTTTTTATACAAAACCTGCTTTTGAAGGTT
ATACACGCAATGGAATAAAAATAGGAACGGAACTCCCGAATAAGTAAAAC
AGAATGATCCACTCAGGTTTCCTGCTTCTGCTGATCACACTCTGAAATGG
CAGTTTCCTGCACGTCAATCCTACCTAACAAAGAAATCAAAGAGGGAACT
TTTGATGATCCATTCGACCTCATGTCCGTACCTGAATTTTCAAGTGATTT
AAGGACATCAGATTTCTTAAATGTATATCCGATAAAATTGGTATCTTTTG
ATGTCAGCATCTTTCTCCAAGGTCCCACACTTGGTATCTCCGATGGTGGG
CCGTCTACTTCTGGAAACTTCTCAAAATTCTGAGTATCCAGCTCCCCATT
GACTGTAGGCTTATATGCAGCTTCCATTTCATACAACTTGTCCCATTGGA
TTCCTCTGAACCATGGATGTTCCTTCAATTCTTCAACTCCTCTGGTTCCA
AGCCTTGTCTCAACATCACAGAGCAAGTGACAAATCAGATCCCTAGCCTC
ATCTGATATTTTTGGTTCTTCAGGGAATTTCAGGCATGTTTTCCAATTGA
CTATCTTGGCGGCATGTGATCCTTGGAT
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