DC887829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC887829 vs. ExPASy Swiss-Prot
Match: RL15B_PICMA (60S ribosomal protein L15-2 OS=Picea mariana GN=SB62 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.079e-29 Identity = 56/62 (90.32%), Postives = 59/62 (95.16%), Query Frame = -3 Query: 180 RNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 365 RNDPRINWIC VHKHRELRGLTSAGKKYRGLRG+GHL+HKARPS+RATWKRN TLSLRRYR Sbjct: 143 RNDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHLYHKARPSKRATWKRNNTLSLRRYR 204
BLAST of DC887829 vs. ExPASy Swiss-Prot
Match: RL15_PETHY (60S ribosomal protein L15 OS=Petunia hybrida GN=RPL15 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.769e-28 Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = -3 Query: 180 RNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 365 RNDPRINWIC PVHKHRELRGLTSAGKKYRGLRG+GHLH+KA PSRRA WKRNQTLSL RYR Sbjct: 143 RNDPRINWICNPVHKHRELRGLTSAGKKYRGLRGRGHLHNKAPPSRRANWKRNQTLSLPRYR 204
BLAST of DC887829 vs. ExPASy Swiss-Prot
Match: RL15A_PICMA (60S ribosomal protein L15-1 OS=Picea mariana GN=SB61 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.017e-28 Identity = 55/62 (88.71%), Postives = 58/62 (93.55%), Query Frame = -3 Query: 180 RNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 365 R DPRINWIC VHKHRELRGLTSAGKKYRGLRG+GHL+HKARPS+RATWKRN TLSLRRYR Sbjct: 143 RKDPRINWICNAVHKHRELRGLTSAGKKYRGLRGRGHLYHKARPSKRATWKRNNTLSLRRYR 204
BLAST of DC887829 vs. ExPASy Swiss-Prot
Match: RL151_ARATH (60S ribosomal protein L15-1 OS=Arabidopsis thaliana GN=RPL15A PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.655e-26 Identity = 53/62 (85.48%), Postives = 56/62 (90.32%), Query Frame = -3 Query: 180 RNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 365 RNDPRINWIC PVHKHRELRGLTS GKK RGLRGKGH +HK RPSRRATWK+N +LSLRRYR Sbjct: 143 RNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHNNHKNRPSRRATWKKNNSLSLRRYR 204
BLAST of DC887829 vs. ExPASy Swiss-Prot
Match: RL152_ARATH (60S ribosomal protein L15-2 OS=Arabidopsis thaliana GN=RPL15B PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.824e-26 Identity = 52/62 (83.87%), Postives = 56/62 (90.32%), Query Frame = -3 Query: 180 RNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 365 RNDPRINWIC PVHKHRELRGLTS GKK RGLRGKGH +HK RPSRRATWK+N ++SLRRYR Sbjct: 143 RNDPRINWICNPVHKHRELRGLTSEGKKNRGLRGKGHNNHKNRPSRRATWKKNNSISLRRYR 204
BLAST of DC887829 vs. ExPASy Swiss-Prot
Match: RL15_DICDI (60S ribosomal protein L15 OS=Dictyostelium discoideum GN=rpl15-1 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.727e-19 Identity = 45/63 (71.43%), Postives = 48/63 (76.19%), Query Frame = -3 Query: 180 RNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKG-HLHHKARPSRRATWKRNQTLSLRRYR 365 RNDPR NWICKPVHKHRELRGLTSAG K RGLR KG H K RPSR+A +KR T+ RYR Sbjct: 143 RNDPRYNWICKPVHKHRELRGLTSAGIKARGLRRKGTHRASKTRPSRQANYKRRNTVVFHRYR 205
BLAST of DC887829 vs. ExPASy Swiss-Prot
Match: RL15_NEUCR (60S ribosomal protein L15 OS=Neurospora crassa GN=rpl-15 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.828e-18 Identity = 43/62 (69.35%), Postives = 47/62 (75.81%), Query Frame = -3 Query: 180 RNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 365 R DPRINWI PVHKHRE RGLTS GK+ RGL KGH ++K R RR TWKR+ TLSL RYR Sbjct: 143 RRDPRINWIVNPVHKHRESRGLTSTGKRSRGL-NKGHRYNKTRAGRRKTWKRHNTLSLWRYR 203
BLAST of DC887829 vs. ExPASy Swiss-Prot
Match: RL15B_YEAST (60S ribosomal protein L15-B OS=Saccharomyces cerevisiae GN=RPL15B PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 3.460e-16 Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = -3 Query: 180 RNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNQTLSLRRYR 365 R D R NWIC PVHKHRE RGLT+ GKK RG+ KGH + + RR TWKR TLSL RYR Sbjct: 143 RRDARYNWICNPVHKHREARGLTATGKKSRGI-NKGHKFNNTKAGRRKTWKRQNTLSLWRYR 203
BLAST of DC887829 vs. ExPASy Swiss-Prot
Match: RL15_RAT (60S ribosomal protein L15 OS=Rattus norvegicus GN=Rpl15 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.519e-16 Identity = 41/63 (65.08%), Postives = 45/63 (71.43%), Query Frame = -3 Query: 180 RNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNQTLSLRRYR 365 R +P WI KPVHKHRE+RGLTSAG+K RGL GKGH HH SRRA W+R TL L RYR Sbjct: 143 RRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
BLAST of DC887829 vs. ExPASy Swiss-Prot
Match: RL15_PONAB (60S ribosomal protein L15 OS=Pongo abelii GN=RPL15 PE=2 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 4.519e-16 Identity = 41/63 (65.08%), Postives = 45/63 (71.43%), Query Frame = -3 Query: 180 RNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNQTLSLRRYR 365 R +P WI KPVHKHRE+RGLTSAG+K RGL GKGH HH SRRA W+R TL L RYR Sbjct: 143 RRNPDTQWITKPVHKHREMRGLTSAGRKSRGL-GKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204 The following BLAST results are available for this feature:
BLAST of DC887829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >DC887829 ID=DC887829; Name=DC887829; organism=Citrus sinensis; type=EST; length=367bpback to top |