CN185373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD36_ARATH (LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.868e-35 Identity = 67/103 (65.05%), Postives = 84/103 (81.55%), Query Frame = 3 Query: 87 NSPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEI 395 +SPCA+CK LRR+CT++C+FAPYFPPD P KFA VHKVFGASNV+K+L EL +QR DAV+SL YEA AR+RDPVYGCVG IS LQ+++ Q+ L A+ E+ Sbjct: 5 SSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVNSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKEL 107
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD10_ARATH (LOB domain-containing protein 10 OS=Arabidopsis thaliana GN=LBD10 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.617e-35 Identity = 63/104 (60.58%), Postives = 84/104 (80.77%), Query Frame = 3 Query: 87 NSPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEIL 398 ++PCA+CKLLRR+CT++C+FAPYFPP +P KF VH+VFGASNV+K+L +LP QR D V+SL YEA AR+RDP+YGCVG ISFLQ + ++Q L A+ E++ Sbjct: 3 STPCAACKLLRRKCTQECVFAPYFPPTNPQKFIFVHRVFGASNVTKILNDLPPDQREDTVNSLFYEAEARIRDPIYGCVGLISFLQQYLKKIQQDLLTAKEELV 106
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD13_ARATH (LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13 PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.125e-34 Identity = 67/103 (65.05%), Postives = 81/103 (78.64%), Query Frame = 3 Query: 90 SPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEIL 398 +PCA+CKLLRRRC ++C F+PYF P +PHKFA VHKVFGASNVSKML E+ QR DA +SLVYEAN R+RDP+YGC+GAIS LQ+ + LQ +L EIL Sbjct: 51 TPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEIL 153
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD6_ORYSJ (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=LBD6 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.275e-34 Identity = 67/105 (63.81%), Postives = 81/105 (77.14%), Query Frame = 3 Query: 81 GGNSPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEI 395 G SPCA+CK LRR+C DC+FAPYFPPD+P KF VH+VFGASNV+K+L EL +QR DAV+SL YEA+ R+RDPVYGCV IS LQ + QLQ LA A+ E+ Sbjct: 34 GTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFEL 138
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD6_ORYSI (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica GN=LBD6 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.275e-34 Identity = 67/105 (63.81%), Postives = 81/105 (77.14%), Query Frame = 3 Query: 81 GGNSPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEI 395 G SPCA+CK LRR+C DC+FAPYFPPD+P KF VH+VFGASNV+K+L EL +QR DAV+SL YEA+ R+RDPVYGCV IS LQ + QLQ LA A+ E+ Sbjct: 34 GTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFEL 138
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: IAL1_MAIZE (Protein IAL1 OS=Zea mays PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.586e-34 Identity = 65/105 (61.90%), Postives = 82/105 (78.10%), Query Frame = 3 Query: 81 GGNSPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEI 395 G SPCA+CK LRR+C DC+FAPYFPPD+P KF VH+VFGASNV+K++ E+ QR DA++SL YEA+ R+RDPVYGCVG IS LQ+ + QLQ LA A+ E+ Sbjct: 29 GTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVRVHRVFGASNVTKLMNEIHPLQREDAMNSLAYEADMRIRDPVYGCVGVISILQHNLRQLQQDLARAKYEL 133
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD24_ARATH (LOB domain-containing protein 24 OS=Arabidopsis thaliana GN=LBD24 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.176e-33 Identity = 63/100 (63.00%), Postives = 78/100 (78.00%), Query Frame = 3 Query: 96 CASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEI 395 CA+CK LRRRC KDC+F+PYFPP+DP KFA VH+++GA NVSKMLQ+LP RA+AV SL +EA RV DPVYGCVG I L+ Q+ + Q +LA +AEI Sbjct: 6 CAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEI 105
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD23_ARATH (LOB domain-containing protein 23 OS=Arabidopsis thaliana GN=LBD23 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 6.176e-33 Identity = 63/100 (63.00%), Postives = 78/100 (78.00%), Query Frame = 3 Query: 96 CASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEI 395 CA+CK LRRRC KDC+F+PYFPP+DP KFA VH+++GA NVSKMLQ+LP RA+AV SL +EA RV DPVYGCVG I L+ Q+ + Q +LA +AEI Sbjct: 6 CAACKYLRRRCPKDCVFSPYFPPNDPQKFACVHRIYGAGNVSKMLQQLPDQTRAEAVESLCFEAKCRVDDPVYGCVGIIHLLKTQIQKTQNELAKTQAEI 105
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD21_ARATH (LOB domain-containing protein 21 OS=Arabidopsis thaliana GN=LBD21 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.893e-30 Identity = 63/104 (60.58%), Postives = 78/104 (75.00%), Query Frame = 3 Query: 87 NSPCASCKLLRRRCTKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEIL 398 +S CA+CKLL+RRCT CIFAPYF D FA VHKVFGASNVSK+L E+P QR + V+SL YEA R++DPVYGC+GAI+ LQ ++ +LQ LAVA +L Sbjct: 9 SSSCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSKLLGEVPEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQHDLAVARTRLL 112
BLAST of CN185373 vs. ExPASy Swiss-Prot
Match: LBD19_ARATH (LOB domain-containing protein 19 OS=Arabidopsis thaliana GN=LBD19 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.428e-29 Identity = 63/109 (57.80%), Postives = 77/109 (70.64%), Query Frame = 3 Query: 81 GGNSPCASCKLLRRRCTKDCIFAPYFPPDD-PHKFAIVHKVFGASNVSKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSQLQMQLAVAEAEILCI 404 GG PC +CK LRR+C K C+FAPYF + +FA VHKVFGASN SKML LP+H+R DAV +L YEA AR+RDPVYG VG + LQ+QV LQ +LA +A + I Sbjct: 12 GGEGPCGACKFLRRKCVKGCVFAPYFDAEQGTARFAAVHKVFGASNASKMLLRLPLHKRLDAVVTLCYEAMARIRDPVYGSVGHLFSLQHQVMNLQAELAHVQARLSTI 120 The following BLAST results are available for this feature:
BLAST of CN185373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN185373 ID=CN185373; Name=CN185373; organism=Citrus sinensis; type=EST; length=621bpback to top |