CN185369
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: IF4A_BOTFB (ATP-dependent RNA helicase eIF4A OS=Botryotinia fuckeliana (strain B05.10) GN=tif1 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23 Identity = 63/151 (41.72%), Postives = 90/151 (59.60%), Query Frame = 1 Query: 262 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 LKPELLR + GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ + N Q AL+L TRELA QI ++ +++ GG +++ L+ + PQ+VVGTPGR+ + + + L +++ F+LDE D+ML Sbjct: 32 LKPELLRGVYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKLDPNVKQCQALILAPTRELAQQIQKVVVAIGDFM-NVECHACIGGTSVRDDMKALQ-DGPQVVVGTPGRVHDMIQRRFLKTDSMKMFVLDEADEML 180
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: RH6_ORYSJ (DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica GN=Os04g0533000 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.429e-23 Identity = 62/157 (39.49%), Postives = 92/157 (58.60%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 F D+ LK ELL I + GFE PS +Q E IP A+ G D++ +AK+G GKTA F + L++ + + + ++L TRELA Q + +L I+V V GG ++K D+++ P ++VGTPGRIL L + LKN ++DE DK+L Sbjct: 126 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDKNAIQVVILVPTRELALQTSQVCKELGKHL-KIQVMVTTGGTSLK--DDIVRLYQPVHLLVGTPGRILDLTKKGVCVLKNCSMLVMDEADKLL 279
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DEAD_MYCTU (Cold-shock DEAD box protein A homolog OS=Mycobacterium tuberculosis GN=deaD PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.429e-23 Identity = 61/156 (39.10%), Postives = 85/156 (54.49%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 F D + P +LRAI D G+E P+ +Q IP + G DV+ A++G GKTA F + L + ++ ALVL TRELA Q+ F R+ YL + V YGG + + L+ Q+VVGTPGR++ L L V +LDE D+ML Sbjct: 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSKIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGLRRGA-QVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEML 169
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DEAD_BUCAP (Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp. Schizaphis graminum GN=deaD PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.429e-23 Identity = 64/161 (39.75%), Postives = 89/161 (55.28%), Query Frame = 1 Query: 235 HSSGFRDFL-LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 H+ FL L P +++++ G+ PS +Q CIP + G DV+ A++G GKTA F L L +N LVL TRELA Q+ F FS Y+ I V YGG ++ L+ + PQIVVGTPGR+L + L+L N+ +LDE D+ML Sbjct: 3 HTESTFSFLGLNPFIIKSLSKMGYVKPSPIQAACIPLLLEGRDVLGMAQTGSGKTAAFSLPLLHNLNINLKAPQILVLAPTRELAVQVAEAFSDFSKYIMGIHVLPLYGGQRYEVQLRALR-QGPQIVVGTPGRLLDHLKRGTLNLSNLYALVLDEADEML 162
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DEAD_BUCAI (Cold-shock DEAD box protein A homolog OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=deaD PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.429e-23 Identity = 61/151 (40.40%), Postives = 86/151 (56.95%), Query Frame = 1 Query: 262 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 L P +++++ + G+ PS +Q CIP + G DV+ A++G GKTA F L L +N LVL TRELA Q+ F FS Y+ I V YGG ++ L+ + PQIVVGTPGR+L + L+L N+ +LDE D+ML Sbjct: 13 LNPFIIQSLNEMGYVKPSPIQASCIPLLLEGRDVLGMAQTGSGKTAAFSLPLLHNLNINLKAPQILVLAPTRELAVQVAEAFSDFSKYMIGIHVLPLYGGQRYELQLRALR-QGPQIVVGTPGRLLDHLKRGTLNLSNLHGLVLDEADEML 162
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: IF4A_MAGGR (ATP-dependent RNA helicase eIF4A OS=Magnaporthe grisea GN=TIF1 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.479e-23 Identity = 65/156 (41.67%), Postives = 90/156 (57.69%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 F + LK ELLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ + N Q AL+L TRELA QI ++ +I+ GG +++ L+ + PQ+VVGTPGR+ + + + L ++ F+LDE D+ML Sbjct: 25 FDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDVIAQAQSGTGKTATFSISVLQKIDTNVKQCQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTSVRDDMKALQ-DGPQVVVGTPGRVHDMIQRRFLKTDGMKMFVLDEADEML 178
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DHH1_MAGGR (ATP-dependent RNA helicase DHH1 OS=Magnaporthe grisea GN=DHH1 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.479e-23 Identity = 66/157 (42.04%), Postives = 90/157 (57.32%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L+ ++ L+L TRELA Q + +L I V V GG ++ D+L+ + P IVVGTPGRIL LA L FI+DE DK+L Sbjct: 38 FENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALETINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTTLR--DDILRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL 191
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DBP9_MAGGR (ATP-dependent RNA helicase DBP9 OS=Magnaporthe grisea GN=DBP9 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.479e-23 Identity = 64/166 (38.55%), Postives = 94/166 (56.63%), Query Frame = 1 Query: 238 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ----QTELNPG--QVTALVLCHTRELAYQICHEFERFSTY-LPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 SS F D L P LL+A+ F+ P+ VQ + IP A+ G DV+ +AK+G GKTA +VL LQ + ++NPG +++L+L TREL Q+ E ERFS + +++V V+ + + LL++ P IVV TP LSL + H +LDE D +L Sbjct: 42 SSSFADLGLDPRLLQAVAQQSFQKPTLVQSKAIPLALEGRDVLAKAKTGSGKTAAYVLPILQAVLKRKQINPGATYISSLILVPTRELTVQVTKEVERFSAFCAKEVQVVGLTDKVSDAVQRSLLQSSSPDIVVSTPSTAWRNVDSGALSLDKLTHLVLDEADLVL 207
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: IF4A_ASPCL (ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus GN=tif1 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.850e-23 Identity = 66/159 (41.51%), Postives = 89/159 (55.97%), Query Frame = 1 Query: 238 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 + F LKPELLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ + N AL+L TRELA QI ++ ++ GG N++ L+ + PQ+VVGTPGR+ + + + L ++ FILDE D+ML Sbjct: 24 TDSFDSMDLKPELLRGIYAYGFERPSAIQQRAIMPIIKGSDVIAQAQSGTGKTATFSISALQKIDPNLKACQALILAPTRELAQQIQKVVVAIGDFM-SLECHACIGGTNVREDMKALQ-DGPQVVVGTPGRVQDMIQRRVLRTDQMKLFILDEADEML 180
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DHH1_PICGU (ATP-dependent RNA helicase DHH1 OS=Pichia guilliermondii GN=DHH1 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.640e-23 Identity = 62/157 (39.49%), Postives = 91/157 (57.96%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 F +F LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ LQQ + ++ L+L TRELA Q + +L ++ V GG ++ D+++ + P I+VGTPGR+L LA F++DE DKML Sbjct: 31 FEEFGLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPALQQVKTKLNKIQVLILVPTRELALQTSQVVKTLGKHL-KLQCMVTTGGTLLR--DDVMRLDEPVHILVGTPGRVLDLAARSIADFSECPMFVMDEADKML 184 The following BLAST results are available for this feature:
BLAST of CN185369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185369 ID=CN185369; Name=CN185369; organism=Citrus sinensis; type=EST; length=719bpback to top |