CN185369
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: SUB2_CRYNE (ATP-dependent RNA helicase SUB2 OS=Cryptococcus neoformans GN=SUB2 PE=3 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 5.230e-64 Identity = 123/187 (65.78%), Postives = 147/187 (78.61%), Query Frame = 1 Query: 175 PDSVATKANGEAA---KKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 P + A + NG+ A KKG YVGIHS+GFRDFLLKPELLRAI D GFEHPSEVQ ECIPQAILG DV+CQAKSGMGKTAVFVL+ LQQ E G+V+ ++LCHTRELAYQI +EF RFS ++ +++ VFYGG I +++L K +CP IVVGTPGR +AL RDK L+ V+HF+LDECDKMLE Sbjct: 33 PPAPAAETNGDKADGDKKGSYVGIHSTGFRDFLLKPELLRAISDLGFEHPSEVQQECIPQAILGTDVLCQAKSGMGKTAVFVLAALQQIEPVDGEVSIIILCHTRELAYQIKNEFTRFSKFMTNVRTGVFYGGTPISADQEILANKEKCPHIVVGTPGRTMALVRDKKLNASKVKHFVLDECDKMLE 219
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: SUB2_PICGU (ATP-dependent RNA helicase SUB2 OS=Pichia guilliermondii GN=SUB2 PE=3 SV=3) HSP 1 Score: 243.047 bits (619), Expect = 1.165e-63 Identity = 121/187 (64.71%), Postives = 149/187 (79.68%), Query Frame = 1 Query: 166 AQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 + AP++ A A+ +A KKG YVGIH++GFRDFLLKPELLRAI D GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ + PG++T LV+CHTRELAYQI +E+ RFS Y+PD+K VFYGG+ I + LKN+ CP IVV TPGR+ AL +K + L NV+ F++DECDK+LE Sbjct: 22 SNAPEAGADGADKDADKKGSYVGIHATGFRDFLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEITTLVICHTRELAYQIRNEYARFSKYMPDVKTEVFYGGIPIAKDIEKLKNKDTCPHIVVATPGRLHALVEEKAIRLNNVKSFVIDECDKVLE 208
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: SUB2_ASPOR (ATP-dependent RNA helicase sub2 OS=Aspergillus oryzae GN=sub2 PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.390e-63 Identity = 126/198 (63.64%), Postives = 148/198 (74.75%), Query Frame = 1 Query: 172 APDSVATKANGEAAKKG--------------YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 A + A ANG+AAKKG YVGIHS+GFRDFLLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q E PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P IVVGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ Sbjct: 21 AATTAAPAANGDAAKKGDLTVSGGRPDKKGSYVGIHSTGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVEVLSNKESYPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLD 218
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: SUB2_EMENI (ATP-dependent RNA helicase sub2 OS=Emericella nidulans GN=sub2 PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.682e-62 Identity = 122/183 (66.67%), Postives = 143/183 (78.14%), Query Frame = 1 Query: 178 DSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 D T G A KKG YVGIHS+GFRDFLLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q E PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P I+VGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ Sbjct: 37 DGELTVTGGRADKKGSYVGIHSTGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKDTFPNIIVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLD 219
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: SUB2_CHAGB (ATP-dependent RNA helicase SUB2 OS=Chaetomium globosum GN=SUB2 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.870e-62 Identity = 125/190 (65.79%), Postives = 146/190 (76.84%), Query Frame = 1 Query: 172 APDSVATKANGEAA-----KKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 AP S K + AA KKG YVGIHS+GFRDFLLKPELLRAI D GFEHPSEVQ CIPQA+LG D+ICQAKSG+GKTAVFVL+TLQQ E G+ + LV+CHTRELA+QI +E+ RFS Y+PDIK VFYGG I+ ++LKN+ P I+VGTPGR+ AL RDK L L NVR F+LDECDKML+ Sbjct: 21 APASNGKKGDAAAAAQNVDKKGSYVGIHSTGFRDFLLKPELLRAIADCGFEHPSEVQQTCIPQAMLGGDIICQAKSGLGKTAVFVLTTLQQVEPVAGECSVLVMCHTRELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDAEVLKNKETHPHIIVGTPGRLNALVRDKHLRLGNVRMFVLDECDKMLD 210
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: SUB2_ASPNC (ATP-dependent RNA helicase sub2 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sub2 PE=3 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.870e-62 Identity = 122/179 (68.16%), Postives = 142/179 (79.33%), Query Frame = 1 Query: 190 TKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 T + G KKG YVGIHS+GFRDFLLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q E PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ +LL N+ P IVVGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ Sbjct: 39 TVSGGRPDKKGSYVGIHSTGFRDFLLKEELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVELLSNKESYPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLD 217
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: SUB2_COCIM (ATP-dependent RNA helicase SUB2 OS=Coccidioides immitis GN=SUB2 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.895e-62 Identity = 123/200 (61.50%), Postives = 148/200 (74.00%), Query Frame = 1 Query: 166 AQAPDSVATKANGEAAKKG--------------YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 A A + A ANG A KKG YVG+HS+GFRDFLLKPELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q E PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG ++ ++L K+ P IVVGTPGR+ AL R+K LSL+N++ F+LDECDKML+ Sbjct: 21 AAAAATAAAAANGAAVKKGDLTVSGARADKKGSYVGVHSTGFRDFLLKPELLRAITDCGFEHPSEVQQVCIPTAILKVDVLCQAKSGLGKTAVFVLTTLNQLEPVPGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPMQKDIEVLSSKDTYPNIVVGTPGRLNALVREKKLSLRNIKAFVLDECDKMLD 220
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: SUB2_ASPCL (ATP-dependent RNA helicase sub2 OS=Aspergillus clavatus GN=sub2 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.895e-62 Identity = 123/187 (65.78%), Postives = 144/187 (77.01%), Query Frame = 1 Query: 166 AQAPDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 AQ T + G KKG YVGIHS+GFRDFLLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q E PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P IVVGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ Sbjct: 32 AQDKKGDLTVSGGRPDKKGSYVGIHSTGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVEVLSNKESYPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLD 218
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: SUB2_YARLI (ATP-dependent RNA helicase SUB2 OS=Yarrowia lipolytica GN=SUB2 PE=3 SV=2) HSP 1 Score: 236.498 bits (602), Expect = 1.090e-61 Identity = 116/182 (63.74%), Postives = 142/182 (78.02%), Query Frame = 1 Query: 178 DSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 ++ K K YVGIHS+GFRDFLLKPELLRAIVD GFEHPSEVQ CIPQ+ILG DV+CQAK+G+GKTAVFVLSTLQQ E PG+ + +VLCHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ +L++N+ P ++V TPGR+ AL RDK L L NV+ F++DECDK+L+ Sbjct: 36 ETTTVKEENTEQKGSYVGIHSTGFRDFLLKPELLRAIVDCGFEHPSEVQQVCIPQSILGTDVLCQAKAGVGKTAVFVLSTLQQLEPVPGECSVVVLCHTRELAYQIMNEYARFSKYLPDVKTAVFYGGSPIQKDIELIQNKETSPHVIVATPGRLHALVRDKHLRLGNVKTFVIDECDKVLD 217
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: SUB2_PICST (ATP-dependent RNA helicase SUB2 OS=Pichia stipitis GN=SUB2 PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.090e-61 Identity = 118/174 (67.82%), Postives = 140/174 (80.46%), Query Frame = 1 Query: 205 EAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK--IHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 EA KKG YVGIH++GFRDFLLKPELLRAI D GFEHPSEVQ CIPQ+ILG DV+CQAKSG+GKTAVFVLSTLQQ + PG+++ LV+CHTRELAYQI +E+ RFS Y+PD+K VFYGG IK I K K+ CP IVV TPGR+ AL +K + L NV+ F++DECDK+LE Sbjct: 36 EADKKGSYVGIHATGFRDFLLKPELLRAIGDCGFEHPSEVQQVCIPQSILGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEISTLVICHTRELAYQIRNEYARFSKYMPDVKTEVFYGGTPIKRDIEKLKSKDTCPHIVVATPGRLHALVNEKAIRLSNVKSFVIDECDKVLE 209 The following BLAST results are available for this feature:
BLAST of CN185369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185369 ID=CN185369; Name=CN185369; organism=Citrus sinensis; type=EST; length=719bpback to top |