CN185369
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DBP8_DEBHA (ATP-dependent RNA helicase DBP8 OS=Debaryomyces hansenii GN=DBP8 PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.396e-16 Identity = 58/160 (36.25%), Postives = 81/160 (50.62%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGR----ILALARDKDLSLKNVRHFILDECDKML 714 F + + L A+ P+ +Q CIP+ + G D I AK+G GKT F L Q +P + LVL TRELA QI +F + + +IKV+V GG +I + + L P VV TPGR IL D L+ V++ ILDE D++L Sbjct: 3 FEELGVSKWLSEALNSMKIHTPTTIQSACIPKILKGHDCIGGAKTGSGKTIAFAAPMLTQWSEDPSGIYGLVLTPTRELALQIAEQFAALGSSM-NIKVSVIVGGEDI-VKQALELQRRPHFVVATPGRLADHILNSGEDTVCGLRRVKYLILDEADRLL 160
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DBP5_SCHPO (ATP-dependent RNA helicase dbp5 OS=Schizosaccharomyces pombe GN=dbp5 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.396e-16 Identity = 53/159 (33.33%), Postives = 88/159 (55.35%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILG--MDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 F + LKPELL+ I F+ PS++Q + +P + ++I Q++SG GKTA F L+ L + + + + A+ L +RELA QI Y ++K A G+ + K + QIV+GTPG ++ L + + L ++++ F+LDE D ML+ Sbjct: 116 FEELELKPELLKGIYSMKFQKPSKIQEKALPLLLSNPPRNMIGQSQSGTGKTAAFALTMLSRVDASVPKPQAICLAPSRELARQIMDVVTEMGKYT-EVKTAF---GIKDSVPKGAKIDA--QIVIGTPGTVMDLMKRRQLDARDIKVFVLDEADNMLD 268
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: SRMB_ECOLI (ATP-dependent RNA helicase srmB OS=Escherichia coli (strain K12) GN=srmB PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 55/161 (34.16%), Postives = 81/161 (50.31%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ----TELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 F + L LL A+ D GF P+ +Q IP A+ G DV+ A +G GKTA ++L LQ G L+L TRELA Q+ + + + +A GGV H ++ +E IVV T GR+L ++++ + V ILDE D+ML+ Sbjct: 6 FSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVSDHARELAKH-THLDIATITGGVAYMNHAEVF-SENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLD 164
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: RRP3_ASHGO (ATP-dependent rRNA helicase RRP3 OS=Ashbya gossypii GN=RRP3 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 59/194 (30.41%), Postives = 100/194 (51.55%), Query Frame = 1 Query: 166 AQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIH-KDLLKNECPQIVVGTPGRIL--ALARDKDLSLKNVRHFILDECDKML 714 +QA + T + EAA ++G+ S FR+ L PEL+ A + F P+ +Q + IP A+ G D+I A++G GKTA F + L + + A +L TRELA QI F+ + L ++ GG+N+ +DL++ P I++ TPGR++ + +L+ + ++DE D++L Sbjct: 38 SQATEEANTASETEAAVIEETAEPEEGF-----SSFRELDLVPELIEACDNLNFTKPTPIQSKAIPPALQGKDIIGLAQTGSGKTAAFAIPILNRLWHDQQPYYACILAPTRELAQQIKETFDSLGS-LMGVRTTCIVGGMNMMDQARDLMRK--PHIIIATPGRLMDHLEVHKRGFALRKQQFLVMDEADRLL 223
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: RHLB_SHEDO (ATP-dependent RNA helicase rhlB OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=rhlB PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 52/166 (31.33%), Postives = 94/166 (56.63%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTL---------QQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 F D L E+++A+ ++GFE + +Q +P + D+ QA++G GKT F+++T Q ELN Q A+++ TRELA QI + + + +KV + YGG + ++ +++L ++ I++GT GRI+ R +SL +++ +LDE D+M + Sbjct: 11 FADLPLHAEVIQALNENGFEFCTPIQALSLPVLLKAKDIAGQAQTGTGKTMAFLVATFNHLLTTPAPQARELN--QPRAIIMAPTRELAIQIAKDANLLAKH-TGLKVGIVYGGESYEVQREVL-DKGVDILIGTTGRIIDYVRQGVISLNSIQAVVLDEADRMFD 172
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DD19B_HUMAN (ATP-dependent RNA helicase DDX19B OS=Homo sapiens GN=DDX19B PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 54/159 (33.96%), Postives = 86/159 (54.09%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILG--MDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKNVRHFILDECDKML 714 F + LKP+LL+ + GF PS++Q +P + ++I Q++SG GKTA FVL+ L Q E L L T ELA Q E+ + P++K+A G ++ + + + QIV+GTPG +L ++ K + K ++ F+LDE D M+ Sbjct: 94 FEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISE----QIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMI 248
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DBP9_ASPOR (ATP-dependent RNA helicase dbp9 OS=Aspergillus oryzae GN=dbp9 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 54/163 (33.13%), Postives = 87/163 (53.37%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ------QTELNPGQVTALVLCHTRELAYQICHEFERFSTYL-PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 F L P L +A++ F P+ VQ + IP A+ G D++ +AK+G GKTA +VL LQ T+ + T L+L TRELA Q+ + F+ + D++ V+ + + +L + P +VV TP R++ LSL+N+ H ++DE D +L Sbjct: 29 FESLNLDPRLRQALIKEKFTKPTLVQAKAIPLALEGKDILARAKTGSGKTAAYVLPILQTILQKKATDPSFKATTGLILVPTRELAEQVQNVVTTFAAFCGKDVRSVNLTQKVSDAVQRTMLA-DYPDLVVSTPARVVTNLGSSALSLENLTHLVIDEADLVL 190
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DBP10_EMENI (ATP-dependent RNA helicase dbp10 OS=Emericella nidulans GN=dbp10 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 56/179 (31.28%), Postives = 94/179 (52.51%), Query Frame = 1 Query: 190 TKANGEAAK-KGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTA--LVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 T AN ++A KG GF+ L LL+AI GF P+ +Q + IP + DV+ A++G GKTA FV+ +++ + + + A L+L +RELA Q + D+K + GG +++ ++ P IV+ TPGR L L + +L L ++++ + DE D++ E Sbjct: 73 TSANRKSANLKGRTVKKGGGFQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKFGARGLILSPSRELALQTLKVVKELGKG-TDLKSVLLVGGDSLEEQFGMMAGN-PDIVIATPGRFLHLKVEMNLDLSSIKYVVFDEADRLFE 249
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DBP10_COCIM (ATP-dependent RNA helicase DBP10 OS=Coccidioides immitis GN=DBP10 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.823e-16 Identity = 54/179 (30.17%), Postives = 91/179 (50.84%), Query Frame = 1 Query: 187 ATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQV--TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 A+ G KKG GF+ L LL+AI GF P+ +Q + IP + DV+ A++G GKTA FV+ +++ + + +V L+L +RELA Q + D+K + GG +++ + P I++ TPGR L L + +L L ++++ + DE D++ E Sbjct: 69 ASNLKGRTVKKG------GGFQAMGLNANLLKAITRKGFSVPTPIQRKTIPLVLDDQDVVGMARTGSGKTAAFVIPMIEKLKSHSTKVGSRGLILSPSRELALQTLKVVKELGRG-TDLKCVLLVGGDSLEEQFGYMAGN-PDIIIATPGRFLHLKVEMNLDLSSIKYVVFDEADRLFE 239
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: RH35A_ORYSJ (DEAD-box ATP-dependent RNA helicase 35A OS=Oryza sativa subsp. japonica GN=Os02g0150100 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16 Identity = 58/170 (34.12%), Postives = 92/170 (54.12%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQ---QTELN----PGQ-VTALVLCHTRELAYQICHEFERFSTYL-----PDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 FRD L +LR + + G P+ +Q + +P + G D+I A +G GKT VFVL + Q E+ PG+ +++C +RELA Q E+F L P+I+ + GGV+++ D++K IVV TPGR+ L K ++L N R+ LDE D++++ Sbjct: 184 FRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLIMVALQEEMMMPIVPGEGPFGMIICPSRELAKQTYDVIEQFLVPLKEAGYPEIRPLLCIGGVDMRAQLDVVKKGV-HIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVD 352 The following BLAST results are available for this feature:
BLAST of CN185369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185369 ID=CN185369; Name=CN185369; organism=Citrus sinensis; type=EST; length=719bpback to top |