CN185369
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DDX3_DROME (ATP-dependent RNA helicase bel OS=Drosophila melanogaster GN=bel PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 58/174 (33.33%), Postives = 87/174 (50.00%), Query Frame = 1 Query: 241 SGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQT----ELNPGQVT-----------ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 + F D L + + + ++ P+ VQ IP I G D++ A++G GKTA F++ L Q + P Q T LVL TRELA QI E ++F+ Y ++ AV YGG N L C ++V TPGR+ + + L+N+R +LDE D+ML+ Sbjct: 295 TSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFA-YRSRMRPAVLYGGNNTSEQMRELDRGC-HLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLD 466
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DBP8_PICST (ATP-dependent RNA helicase DBP8 OS=Pichia stipitis GN=DBP8 PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 53/160 (33.12%), Postives = 80/160 (50.00%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGR----ILALARDKDLSLKNVRHFILDECDKML 714 F D + L A+ P+ +Q CIP+ + G D I AK+G GKT F L Q +P + LVL TRELA QI +F + +IK++V GG + + + L + P V+ TPGR IL + L+ +++ +LDE D++L Sbjct: 3 FEDLGVSRWLSEALAAMKIHTPTAIQSGCIPKILSGHDCIGGAKTGSGKTIAFAAPMLTQWSEDPFGIFGLVLTPTRELALQIAEQFAALGASM-NIKISVVVGGEDF-VKQTLELQKKPHFVIATPGRLADHILNSGEETISGLRRIKYLVLDEADRLL 160
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DBP8_LODEL (ATP-dependent RNA helicase DBP8 OS=Lodderomyces elongisporus GN=DBP8 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 50/139 (35.97%), Postives = 73/139 (52.52%), Query Frame = 1 Query: 310 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGR----ILALARDKDLSLKNVRHFILDECDKML 714 P+ +Q CIP+ + G D I AK+G GKT F L Q +P + L+L TRELA QI +F L +IKV V GG + + + L + P V+ TPGR IL + L+ +++ +LDE D++L Sbjct: 26 PTSIQSACIPEILKGRDCIGGAKTGSGKTIAFAALMLTQWSQDPFGIFGLILTPTRELALQIAEQFAALGA-LMNIKVCVVVGGEDF-VKQTLELQKKPHFVIATPGRLADHILNSGEETVSGLRRIKYLVLDEADRLL 162
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DBP8_CANAL (ATP-dependent RNA helicase DBP8 OS=Candida albicans GN=DBP8 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 51/139 (36.69%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 310 PSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGR----ILALARDKDLSLKNVRHFILDECDKML 714 P+ +Q CIP + G D I AK+G GKT F L Q +P + L+L TRELA QI +F + +IKVAV GG + + + L P V+ TPGR IL + L+ V++ +LDE D++L Sbjct: 24 PTAIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPMLTQWSEDPFGIFGLILTPTRELALQIAEQFAALGANM-NIKVAVVVGGEDF-VQQTLALQRKPHFVIATPGRLADHILNSGEETISGLRRVKYLVLDEADRLL 160
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DBP3_ASPOR (ATP-dependent RNA helicase dbp3 OS=Aspergillus oryzae GN=dbp3 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 52/147 (35.37%), Postives = 81/147 (55.10%), Query Frame = 1 Query: 295 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ------TELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 S F+ P+ +Q P G DVI A++G GKT F L L++ T+ P + A+++ TRELA QI + +FS + ++VA +GGV + ++ LK +VV TPGR+ L D + L V++ +LDE D+ML+ Sbjct: 98 SSFKSPTSIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKIQDSAMTKQKPYRPLAVIISPTRELAMQIYDQLLKFSGSV-GVRVACVFGGVRKEEQREALKTA--GVVVATPGRLKDLQNDGSVDLGKVKYLVLDEADRMLD 241
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DBP3_ASPFU (ATP-dependent RNA helicase dbp3 OS=Aspergillus fumigatus GN=dbp3 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 54/148 (36.49%), Postives = 79/148 (53.38%), Query Frame = 1 Query: 295 SGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQV-------TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 S F P+ +Q P G DVI A++G GKT F L +++ L+ G+V A+++ TRELA QI + +F + DI+V YGGV ++ LK IVV TPGR+ L D + L V++ +LDE D+ML+ Sbjct: 103 SSFSSPTPIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCIKKI-LDSGKVKRKHARPAAVIISPTRELAMQIYDQLSKFGASV-DIRVTCIYGGVKKDEQREALKTAA--IVVATPGRLKDLKDDGSVDLGKVKYLVLDEADRMLD 246
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DBP10_VANPO (ATP-dependent RNA helicase DBP10 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DBP10 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 51/166 (30.72%), Postives = 88/166 (53.01%), Query Frame = 1 Query: 235 HSSG-FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQV--TALVLCHTRELAYQICHEFERFS--TYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 H G F F +L + GF P+ +Q + IP + D++ A++G GKTA FVL +++ + + ++ A++L +RELA Q F+ FS T+L + + GG +++ ++ + P ++V TPGR L L + L LK V + + DE D++ E Sbjct: 118 HKKGSFPSFGFSKLILSNVHKKGFRQPTPIQRKTIPLILQKRDIVGMARTGSGKTAAFVLPMIEKLKSHSSKIGARAVILSPSRELALQTHRVFKEFSKGTHLRSV---LLTGGDSLEDQFSMMMSN-PDVIVATPGRFLHLKVEMSLDLKTVEYVVFDEADRLFE 279
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DBP10_ASHGO (ATP-dependent RNA helicase DBP10 OS=Ashbya gossypii GN=DBP10 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 49/171 (28.65%), Postives = 91/171 (53.22%), Query Frame = 1 Query: 211 AKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQV--TALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 AKKG F F L +L I GF P+ +Q + IP + D++ A++G GKTA FVL +++ +++ ++ A++L +RELA Q F+ F+ +++ + GG ++ ++ + P +++ TPGR L L + +L L ++ + + DE D++ E Sbjct: 117 AKKG-------SFASFGLSKFILGNISRKGFRQPTPIQRKTIPLILQQRDIVGMARTGSGKTAAFVLPLIEKLKMHSAKIGARAMILSPSRELAMQTHKVFKEFAKG-SNLRSVLLTGGDGLEDQFSMMMSN-PDVIIATPGRFLHLKVEMNLDLHSIEYVVFDEADRLFE 278
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: CSHB_BACSU (DEAD-box ATP-dependent RNA helicase cshB OS=Bacillus subtilis GN=cshB PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.489e-15 Identity = 53/159 (33.33%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFS--TYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 F + LKP ++ A+ GF P+++Q IP + VI Q+++G GKT ++L L + + V ++ TRELA QI E + + I+ F GG + + D LK + P +VVGTPGRI L +++ LS+ ++DE D ML+ Sbjct: 6 FELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNKIDPAKDVVQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKLKIQ-PHLVVGTPGRIADLIKEQALSVHKAESLVIDEADLMLD 163
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: ROK1_YEAST (ATP-dependent RNA helicase ROK1 OS=Saccharomyces cerevisiae GN=ROK1 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.863e-15 Identity = 46/161 (28.57%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 256 FLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ--TELNPGQVTALVLCHTRELAYQICHE-----FERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLE 717 F LL ++++GF P+ +Q ECIP A+ DV+ +G GKT F++ +QQ + + L++ T+ELA QI E ++ F ++VA+ + K+ ++ ++ I++ TP R++ + +++ L L V+H I DE DK+ + Sbjct: 127 FSFDKRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLAFLIPLVQQIIDDKQTAGLKGLIISPTKELANQIFIECFKLSYKIFLEKKRPLQVALLSKSLGAKLKNKVVSDKKYDIIISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFD 287 The following BLAST results are available for this feature:
BLAST of CN185369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185369 ID=CN185369; Name=CN185369; organism=Citrus sinensis; type=EST; length=719bpback to top |