CN185369
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: IF4A1_PONAB (Eukaryotic initiation factor 4A-I OS=Pongo abelii GN=EIF4A1 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.785e-25 Identity = 68/154 (44.16%), Postives = 84/154 (54.55%), Query Frame = 1 Query: 253 DFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 D L LLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQQ EL+ ALVL TRELA QI Y+ GG N++ L+ E P I+VGTPGR+ + + LS K ++ F+LDE D+ML Sbjct: 36 DMNLSESLLRGIYAYGFEKPSAIQQRAILSCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEML 188
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DHH1_PHANO (ATP-dependent RNA helicase DHH1 OS=Phaeosphaeria nodorum GN=DHH1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.163e-25 Identity = 66/157 (42.04%), Postives = 92/157 (58.60%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ + AL+L TRELA Q + +L I V V GG +K D+++ P I+VGTPGRIL LA L + F++DE DK+L Sbjct: 51 FEDFFIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERVNPKISKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVSTGGTGLK--DDIIRLSDPVHIIVGTPGRILDLAGKGVADLSTCQTFVMDEADKLL 204
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DHH1_COCIM (ATP-dependent RNA helicase DHH1 OS=Coccidioides immitis GN=DHH1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.163e-25 Identity = 70/181 (38.67%), Postives = 99/181 (54.70%), Query Frame = 1 Query: 175 PDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 P T+ A KG F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++T + AL+L TRELA Q + +L I V V GG ++ D+++ ++ I+VGTPGRIL LA L F++DE DK+L Sbjct: 31 PKDTRTQTEDVTATKGLE------FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERTNPKISKTQALILVPTRELALQTSQVCKTLGKHL-GINVMVTTGGTGLQ--DDIIRLSDTVHIIVGTPGRILDLASKGVADLSECTTFVMDEADKLL 202
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DHH1_ASPTN (ATP-dependent RNA helicase dhh1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=dhh1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.163e-25 Identity = 65/157 (41.40%), Postives = 92/157 (58.60%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ + AL+L TRELA Q H + +L I V V GG + D+++ N+ I+VGTPGR+L LA L F++DE DK+L Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLL 202
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DHH1_ASPOR (ATP-dependent RNA helicase dhh1 OS=Aspergillus oryzae GN=dhh1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.163e-25 Identity = 65/157 (41.40%), Postives = 92/157 (58.60%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ + AL+L TRELA Q H + +L I V V GG + D+++ N+ I+VGTPGR+L LA L F++DE DK+L Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLL 202
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DHH1_ASPNC (ATP-dependent RNA helicase dhh1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=dhh1 PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.163e-25 Identity = 65/157 (41.40%), Postives = 92/157 (58.60%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 F DF +K EL+ I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ TL++ + AL+L TRELA Q H + +L I V V GG + D+++ N+ I+VGTPGR+L LA L F++DE DK+L Sbjct: 49 FEDFYIKRELMMGIFEAGFEKPSPIQEETIPVALTGRDILARAKNGTGKTAAFVIPTLERINPKSTKTQALILVPTRELALQTSHVCKTLGKHL-GINVMVTTGGTGLM--DDIIRLNDAVHILVGTPGRVLDLASKGVADLSECPTFVMDEADKLL 202
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: DHH1_SCHPO (Putative ATP-dependent RNA helicase ste13 OS=Schizosaccharomyces pombe GN=ste13 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.066e-24 Identity = 62/157 (39.49%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 247 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLK-NECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 F D+ LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ +L++ + ++ L+L TRELA Q + ++ ++KV V GG ++ D+++ N+ IVVGTPGR+L LA F++DE DK+L Sbjct: 46 FEDYYLKRELLMGIFEAGFERPSPIQEESIPIALSGRDILARAKNGTGKTAAFVIPSLEKVDTKKSKIQTLILVPTRELALQTSQVCKTLGKHM-NVKVMVTTGGTTLR--DDIIRLNDTVHIVVGTPGRVLDLAGKGVADFSECTTFVMDEADKLL 199
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: RH6_ARATH (DEAD-box ATP-dependent RNA helicase 6 OS=Arabidopsis thaliana GN=RH6 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.375e-24 Identity = 70/183 (38.25%), Postives = 101/183 (55.19%), Query Frame = 1 Query: 169 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 Q D ATK N F D+ LK +LLR I + GFE PS +Q E IP A+ G D++ +AK+G GKT F + TL++ + + A++L TRELA Q + S YL I+V V GG +++ D+++ P ++VGTPGRIL LA+ LK+ ++DE DK+L Sbjct: 144 QTEDVTATKGNE--------------FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKIDPENNVIQAVILVPTRELALQTSQVCKELSKYL-KIEVMVTTGGTSLR--DDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCAMLVMDEADKLL 309
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.375e-24 Identity = 69/159 (43.40%), Postives = 91/159 (57.23%), Query Frame = 1 Query: 238 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 + F LKPELLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ + N AL+L TRELA QI ++ +I+ GG N++ L+ E PQ+VVGTPGR+ + + + L N++ FILDE D+ML Sbjct: 24 TDSFDSMELKPELLRGIYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTNVREDMKALQ-EGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEML 180
BLAST of CN185369 vs. ExPASy Swiss-Prot
Match: RH12_ARATH (DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana GN=RH12 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.102e-24 Identity = 68/183 (37.16%), Postives = 101/183 (55.19%), Query Frame = 1 Query: 169 QAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTELNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKML 714 Q D ATK N F D+ LK +LL+ I + GFE PS +Q E IP A+ G D++ +AK+G GKT F + L++ + N + A++L TRELA Q + S YL +I+V V GG +++ D+++ P ++VGTPGRIL L + LK+ ++DE DK+L Sbjct: 114 QTADVTATKGNE--------------FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYL-NIQVMVTTGGTSLR--DDIMRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLL 279 The following BLAST results are available for this feature:
BLAST of CN185369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185369 ID=CN185369; Name=CN185369; organism=Citrus sinensis; type=EST; length=719bpback to top |