CN185353
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACDP_MYCBO (Probable acyl-CoA dehydrogenase fadE25 OS=Mycobacterium bovis GN=fadE25 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.205e-22 Identity = 65/201 (32.34%), Postives = 100/201 (49.75%), Query Frame = 2 Query: 152 QFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 + + ++ A + IAP AA++D+ FP++ + FN + P+E CI +EE++R S L A + L L+ GS K + LP L + + + A+SE AGSD M+ +A +I+NG K W TNG + V A TD G+ GI+AF++ K GF+ K KLG++GS T Sbjct: 21 EMRSAIRALAEKEIAPHAAEVDEKARFPEEALVALNSSGFN--AVHIPEEYGGQGADSVATCIVIEEVARVDASASL-IPAVNKLGTMGLILRGSEELKKQVLPALAAEGAMASYALSEREAGSDAASMRTRAKADGDHWILNGAKCWITNGGKSTWYTVMAVTDPDRGANGISAFMVHKDDEGFTVGPKERKLGIKGSPT 218
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACADM_BOVIN (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADM PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.205e-22 Identity = 74/219 (33.79%), Postives = 108/219 (49.32%), Query Frame = 2 Query: 116 SSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD---IKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 S S F + Q +F+ + +FARE I P AA+ D++ +P + W+L G N H P+ C+ EE+ A G G+ +N L ++ G+ Q+ KYL ++ + A ++EP AGSDV G+K KA++ YIING KMW TNG A + A++D SK T FI+E PG +K +G R SDT Sbjct: 35 SGFSFEFTEQQKEFQATARKFAREEIIPLAAEYDKTGEYPVPLIKRAWEL-GLMNTH---IPESCGGLGLGTFDSCLISEEL--AYGCTGVQTAIEANSLGQMPVIIAGNDQQQKKYLGRMTEEPLMCAYCVTEPVAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPASKAFTGFIVEADTPGVQIGRKELNMGQRCSDT 247
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACADV_HUMAN (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Homo sapiens GN=ACADVL PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.186e-22 Identity = 63/212 (29.72%), Postives = 106/212 (50.00%), Query Frame = 2 Query: 161 ESVGQFARENIAPRAAKIDQSNSFPQDVNL-------WKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKG-----ITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 E QF +E + P + ++ N ++ L W+ + G+ P E + +E + VG++ GAH ++ ++ G+ AQK+KYLPKL SGE V A ++EP++GSD ++ A G Y +NG+K+W +NG +A V+AKT + + G ITAF++E+G G + K+G++ S+T Sbjct: 96 EEQTQFLKELVEPVSRFFEEVNDPAKNDALEMVEETTWQGLKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNT 307
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACADM_PIG (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Sus scrofa GN=ACADM PE=1 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 5.467e-22 Identity = 78/238 (32.77%), Postives = 114/238 (47.90%), Query Frame = 2 Query: 77 SFFTKKKKHSAAF------SSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD---IKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 S F + +H+ A S S + Q +F+ + +FARE I P AA+ D++ +P + W+L G N H P+ C+ EE+ A G G+ +N L L+ G+ Q+ KYL ++ + A ++EP AGSDV G+K KA++ YIING KMW TNG A + A++D SK T FI+E PG +K +G R SDT Sbjct: 16 SHFGWRSQHTKAVPQCEPGSGFSFELTEQQKEFQATARKFAREEIIPVAAEYDRTGEYPVPLLKRAWEL-GLMNTH---IPESFGGLGLGIIDSCLITEEL--AYGCTGVQTAIEANTLGQVPLIIGGNYQQQKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPASKAFTGFIVEADTPGVQIGRKEINMGQRCSDT 247
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACAD8_DICDI (Isobutyryl-CoA dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=acad8 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.045e-21 Identity = 60/205 (29.27%), Postives = 100/205 (48.78%), Query Frame = 2 Query: 140 DTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDVNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 + Q QF+ FA+E + P A K D+ FP+DV + GI ++ I +E ++ A S H N+C + +G+ Q+ K+LP L+S E + + ++EP +GSD + KA + YI+NG+K + + G ++ +V +T + G KGI+ ++EK PG S +K +KLG T Sbjct: 41 EDQKQFQSMALDFAQEKMKPFAEKWDKEEYFPRDV--MREAAELGFGGIYVREDVGGSGLSRLDASIIIEALASADVSTTAFISIH-NMCAGLIDIYGTEEQRKKFLPSLVSMEKIASYCLTEPGSGSDAGSLSTKATKDGDHYILNGSKAFISGGGDSEVYLVMVRTGAEKGPKGISCLLVEKDTPGLSFGKKEEKLGWNTQPT 242
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACADV_RAT (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadvl PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20 Identity = 61/212 (28.77%), Postives = 107/212 (50.47%), Query Frame = 2 Query: 161 ESVGQFARENIAPRAAKIDQSNSFPQDVNLWKL-------MGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKG-----ITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 E QF +E + P A ++ N ++ +L K+ + G+ P E + E + V ++ GAH ++ ++ +G+ AQK+KYLP++ SG+ + A ++EP++GSDV ++ A G Y +NG+K+W +NG +A V+AKT IK + G ITAF++E+ G + K+G++ S+T Sbjct: 96 EGQTQFLKELVGPVARFFEEVNDPAKNDSLEKVEEDTLQGLKELGAFGLQVPSELGGLGLSNTQYARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQKEKYLPRVASGQALAAFCLTEPSSGSDVASIRSSAVPSPCGKYYTLNGSKIWISNGGLADIFTVFAKTPIKDAATGAVKEKITAFVVERSFGGVTHGLPEKKMGIKASNT 307
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACADM_RAT (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Acadm PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20 Identity = 76/234 (32.48%), Postives = 108/234 (46.15%), Query Frame = 2 Query: 71 CASFFTKKKKHSAAFSSTSLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT--DIKA-GSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 C + TK S + Q +F+ +FARE I P A D+S +P + W+L G N H P+ C+ EE+ A G G+ +N L ++ G+ QK KYL ++ + A ++EP+AGSDV G+K KA++ Y+ING KMW TNG A V ++ D K SK T FI+E PG +K +G R SDT Sbjct: 20 CRAQHTKPSLKQEPGLGFSFELTEQQKEFQTIARKFAREEIIPVAPDYDKSGEYPFPLIKRAWEL-GLINTH---IPESCGGLGLGTFDACLITEEL--AYGCTGVQTAIEANSLGQMPVIIAGNDQQKKKYLGRMTEQPMMCAYCVTEPSAGSDVAGIKTKAEKKGDEYVINGQKMWITNGGKANWYFVLTRSNPDPKVPASKAFTGFIVEADTPGIHIGKKELNMGQRCSDT 247
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACADM_MOUSE (Medium-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Mus musculus GN=Acadm PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20 Identity = 77/238 (32.35%), Postives = 113/238 (47.48%), Query Frame = 2 Query: 77 SFFTKKKKHSAAFSST------SLLFDDTQLQFKESVGQFARENIAPRAAKIDQSNSFPQDV--NLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSN-LCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKT--DIKA-GSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 S F + +HS A S + Q +F+ + +FARE I P A + D+S +P + W+L G N H P+ C+ EE+ A G G+ +N L ++ G+ QK KYL ++ + A ++EP+AGSDV +K KA++ Y+ING KMW TNG A + A++ D K SK T FI+E PG +K +G R SDT Sbjct: 16 SHFECRTQHSKAAHKQEPGLGFSFELTEQQKEFQATARKFAREEIIPVAPEYDKSGEYPFPLIKRAWEL-GLINAH---IPESCGGLGLGTFDACLITEEL--AYGCTGVQTAIEANSLGQMPVILAGNDQQKKKYLGRMTEQPMMCAYCVTEPSAGSDVAAIKTKAEKKGDEYVINGQKMWITNGGKANWYFLLARSNPDPKVPASKAFTGFIVEADTPGIHIGKKELNMGQRCSDT 247
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACADV_MACFA (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Macaca fascicularis GN=ACADVL PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20 Identity = 54/165 (32.73%), Postives = 90/165 (54.55%), Query Frame = 2 Query: 281 GITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKG-----ITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 G+ P E + +E + +VG++ GAH ++ ++ G+ AQK+KYLPKL SGE + A ++EP++GSD ++ A G Y +NG+K+W +NG +A V+AKT + + G ITAF++E+G G + K+G++ S+T Sbjct: 143 GLQVPSELGGVGLCNTQYARLVEIVGMHDLAVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETLAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGVTHGPPEKKMGIKASNT 307
BLAST of CN185353 vs. ExPASy Swiss-Prot
Match: ACADV_BOVIN (Very long-chain specific acyl-CoA dehydrogenase, mitochondrial OS=Bos taurus GN=ACADVL PE=2 SV=3) HSP 1 Score: 99.7525 bits (247), Expect = 1.759e-20 Identity = 72/242 (29.75%), Postives = 115/242 (47.52%), Query Frame = 2 Query: 59 ARSLCASFFTKKKKHSAAFSSTSLLFDDTQLQFKESVGQFAR--ENIAPRAAKIDQSNSFPQD-VNLWKLMGNFNLHGITAPQEXXXXXXXXXXHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVGMKCKADRVDGG--YIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKG-----ITAFIIEKGMPGFSTAQKLDKLGMRGSDT 754 ++S F + F S+L +D KE VG R E + AAK D + + K +G F G+ P E + +E + VG+ GAH ++ ++ G+ AQK+KYLPKL SGE + A ++EP++GSD ++ A G Y +NG+K+W +NG +A V+AKT + + G ITAF++E+ G + K+G++ S+T Sbjct: 70 SKSFAVGTFKGQLTTDQVFPYPSVLNEDQTQFLKELVGPVTRFFEEVND-AAKNDMLERVEETTMQGLKELGAF---GLQVPNELGGVGLCNTQYARLVEIVGMYDLGVGIVLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETIAAFCLTEPSSGSDAASIRSSAVPSPCGKYYTLNGSKIWISNGGLADIFTVFAKTPVTDTATGAVKEKITAFVVERSFGGVTHGPPEKKMGIKASNT 307 The following BLAST results are available for this feature:
BLAST of CN185353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185353 ID=CN185353; Name=CN185353; organism=Citrus sinensis; type=EST; length=757bpback to top |