CN185346
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: UAP56_HUMAN (Spliceosome RNA helicase BAT1 OS=Homo sapiens GN=BAT1 PE=1 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.454e-57 Identity = 111/159 (69.81%), Postives = 131/159 (82.39%), Query Frame = -2 Query: 338 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 814 Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+ Sbjct: 266 YVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: UAP56_CHICK (Spliceosome RNA helicase BAT1 OS=Gallus gallus GN=BAT1 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.454e-57 Identity = 111/159 (69.81%), Postives = 131/159 (82.39%), Query Frame = -2 Query: 338 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 814 Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+ Sbjct: 266 YVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: UAP56_CANFA (Spliceosome RNA helicase BAT1 OS=Canis familiaris GN=BAT1 PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.454e-57 Identity = 111/159 (69.81%), Postives = 131/159 (82.39%), Query Frame = -2 Query: 338 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 814 Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+ Sbjct: 266 YVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: UAP56_CAEEL (Spliceosome RNA helicase BAT1 homolog OS=Caenorhabditis elegans GN=hel-1 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.454e-57 Identity = 110/159 (69.18%), Postives = 131/159 (82.39%), Query Frame = -2 Query: 338 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 814 Y+KL E EKNR+L +LLDAL+FNQVVIFVK+V R L++LL E NFPSI IH M+QEERL+RY+ FK+ KRILVATDL GRG+DIERVNIV NYDMP+ +D+YLHRV RAGRFGTKGLAITFVS +D+ LN VQ RF++ I ELPE+ID STY+ Sbjct: 262 YVKLKEAEKNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDENDAKTLNSVQDRFDISITELPEKIDVSTYI 420
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: UAP56_BOVIN (Spliceosome RNA helicase BAT1 OS=Bos taurus GN=BAT1 PE=2 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.454e-57 Identity = 111/159 (69.81%), Postives = 131/159 (82.39%), Query Frame = -2 Query: 338 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 814 Y+KL + EKNRKL DLLD L+FNQVVIFVKSV R L +LLVE NFP+I IH GM QEERL+RY+ FK+ +RILVAT+L GRG+DIERVNI NYDMP+ +DTYLHRV RAGRFGTKGLAITFVS +D+ ILN VQ RFEV+I ELP++ID S+Y+ Sbjct: 266 YVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYI 424
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: SUB2_SCLS1 (ATP-dependent RNA helicase sub2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=sub2 PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 5.515e-55 Identity = 103/159 (64.78%), Postives = 129/159 (81.13%), Query Frame = -2 Query: 341 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPE-QIDTSTY 814 YIKL E EKNR+LN+LLD L FNQV+IFVKS RA EL+KLL ECNFPS+ IHSG+SQEER+ R+ FK+ NKRI VATD+ GRGID+ ++N+ INYD+P AD+YLHRVGRAGRFGTKGLAI+FVS+ +D ++L V+ RFEV + E PE +D++ Y Sbjct: 282 YIKLEEREKNRRLNELLDELSFNQVIIFVKSTVRATELDKLLRECNFPSVAIHSGVSQEERIKRFNDFKDFNKRICVATDVFGRGIDVNKINLAINYDLPPDADSYLHRVGRAGRFGTKGLAISFVSNEADQEVLKAVEKRFEVALPEYPEGGVDSAAY 440
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: SUB2_PHANO (ATP-dependent RNA helicase SUB2 OS=Phaeosphaeria nodorum GN=SUB2 PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 5.515e-55 Identity = 103/160 (64.38%), Postives = 125/160 (78.12%), Query Frame = -2 Query: 338 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ-IDTSTYM 814 Y+KL E EKNRKLNDLLD L+FNQV+IFV+S R EL+KLL ECNFPS +HSG+ QEER+ RYK FKE RI V+TD+ GRGID+ER+N+ INYDMPD AD YLHRVGRAGRFGTKGL+I+FVSS D +L ++ RF +I E PE I +++YM Sbjct: 277 YVKLDEREKNRKLNDLLDNLEFNQVIIFVRSTLRCTELDKLLRECNFPSTAVHSGIGQEERIKRYKEFKEFQTRICVSTDIFGRGIDVERINVAINYDMPDKADAYLHRVGRAGRFGTKGLSISFVSSQDDEAVLKAIEERFAAEIPEFPEDGISSASYM 436
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: SUB2_EMENI (ATP-dependent RNA helicase sub2 OS=Emericella nidulans GN=sub2 PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.096e-54 Identity = 107/160 (66.88%), Postives = 128/160 (80.00%), Query Frame = -2 Query: 338 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ-IDTSTYM 814 YIKLSE EKNRKLN+LLD+L+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG RYK FKE NKRI VATD+ GRGIDIER+N+ INYD+P AD+YLHRVGRAGRFGTKGL+I+FVS+ D +L ++ RFEV + E PE+ +D+STYM Sbjct: 299 YIKLSEAEKNRKLNELLDSLEFNQVIIFVKSTIRANELDKLLRECNFPSIAVHSG--------RYKEFKEFNKRICVATDVFGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSTPEDEQVLKDIEKRFEVALPEYPEEGVDSSTYM 450
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: SUB22_VANPO (ATP-dependent RNA helicase SUB2-2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=SUB2-2 PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.317e-53 Identity = 105/160 (65.62%), Postives = 123/160 (76.88%), Query Frame = -2 Query: 338 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ-IDTSTYM 814 YIKL E EKNRKL LLD L+FNQV+IFVKS RA EL KLL E NFP+I +H M Q ER+ RYK FKE KRI V+TD+ GRGIDIER+N+ INYD+ AD YLHRVGRAGRFGTKGLAI+FVSS D ++L ++Q RF+V I E PE+ ID STY+ Sbjct: 281 YIKLQENEKNRKLAQLLDDLEFNQVIIFVKSTKRANELTKLLNESNFPAITVHGNMKQAERIARYKAFKEFEKRICVSTDVFGRGIDIERINLAINYDLTTEADQYLHRVGRAGRFGTKGLAISFVSSPEDEEVLGKIQERFDVKIAEFPEEGIDPSTYL 440
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: SUB2_KLULA (ATP-dependent RNA helicase SUB2 OS=Kluyveromyces lactis GN=SUB2 PE=3 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 3.026e-53 Identity = 104/160 (65.00%), Postives = 124/160 (77.50%), Query Frame = -2 Query: 338 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQ-IDTSTYM 814 YIKL+E EKNRKL LLD L+FNQV+IFVKS RA EL KLL NFP+I +H M QEER+ RYK FKE KRI V+TD+ GRGIDIER+N+ INYDMP+ AD YLHRVGRAGRFGTKGLAI+ +SS D +L ++Q RF+V I E PE+ +D STY+ Sbjct: 276 YIKLNEKEKNRKLAQLLDDLEFNQVIIFVKSTVRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKEFEKRICVSTDVFGRGIDIERINLAINYDMPNEADQYLHRVGRAGRFGTKGLAISMISSEDDEQVLAKIQERFDVKITEFPEEGVDPSTYL 435 The following BLAST results are available for this feature:
BLAST of CN185346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185346 ID=CN185346; Name=CN185346; organism=Citrus sinensis; type=EST; length=815bpback to top |