CN185346
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: DHH1_VANPO (ATP-dependent RNA helicase DHH1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=DHH1 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.414e-26 Identity = 63/159 (39.62%), Postives = 94/159 (59.12%), Query Frame = -2 Query: 338 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 814 Y + E +K LN L L NQ +IF S +R L K + + + H+ M Q+ER + F++G R LV +DL+ RGIDI+ VN+VIN+D P +A+TYLHR+GR+GRFG GLAI + + +D L +++ +I+ +P ID S Y+ Sbjct: 250 YAFVEEKQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNRVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLI-NWNDRFNLYKIEQELGTEIQAIPATIDKSLYV 407
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: DDX20_HUMAN (Probable ATP-dependent RNA helicase DDX20 OS=Homo sapiens GN=DDX20 PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 2.414e-26 Identity = 56/146 (38.36%), Postives = 89/146 (60.96%), Query Frame = -2 Query: 356 EKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 793 EK + L +L + FNQ ++F SRA L +L FP+ CI M+Q +RL K + R+L++TDL RGID E+VN+V+N D+P +TY+HR+GRAGRFGT GL +T+ + +++ ++ + +++ LP+ I Sbjct: 295 EKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMRIAQKCNINLLPLPDPI 440
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: FAL1_NEUCR (ATP-dependent RNA helicase fal-1 OS=Neurospora crassa GN=fal-1 PE=3 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26 Identity = 58/141 (41.13%), Postives = 89/141 (63.12%), Query Frame = -2 Query: 356 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 778 L DL D L Q VIF + + L + E NF +H M Q+ER + + F++GN R+L++TD+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S D IL ++ + I E+P + Sbjct: 256 LCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS-EDVRILRDIELYYSTQIDEMPMNV 395
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: FAL1_MAGGR (ATP-dependent RNA helicase FAL1 OS=Magnaporthe grisea GN=FAL1 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26 Identity = 58/141 (41.13%), Postives = 89/141 (63.12%), Query Frame = -2 Query: 356 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQI 778 L DL D L Q VIF + + L + E NF +H M Q+ER + + F++GN R+L++TD+ RGID+++V++VINYD+P + + Y+HR+GR+GRFG KG+AI FV+S D IL ++ + I E+P + Sbjct: 257 LCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTS-EDVRILRDIELYYSTQIDEMPMNV 396
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: DDX6_XENTR (Probable ATP-dependent RNA helicase ddx6 OS=Xenopus tropicalis GN=ddx6 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26 Identity = 66/159 (41.51%), Postives = 90/159 (56.60%), Query Frame = -2 Query: 338 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 814 Y ++E +K LN L L NQ +IF S R L K + + + IH+ M QE R + F+ G R LV TDL RGIDI+ VN+VIN+D P A+TYLHR+GR+GRFG GLAI + + D L ++ + +IK +P ID S Y+ Sbjct: 312 YAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLI-TYDDRFNLKSIEEQLGTEIKPIPSSIDKSLYV 469
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: DDX6_MOUSE (Probable ATP-dependent RNA helicase DDX6 OS=Mus musculus GN=Ddx6 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26 Identity = 66/159 (41.51%), Postives = 90/159 (56.60%), Query Frame = -2 Query: 338 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 814 Y ++E +K LN L L NQ +IF S R L K + + + IH+ M QE R + F+ G R LV TDL RGIDI+ VN+VIN+D P A+TYLHR+GR+GRFG GLAI + + D L ++ + +IK +P ID S Y+ Sbjct: 313 YAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLI-TYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYV 470
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: DDX6_HUMAN (Probable ATP-dependent RNA helicase DDX6 OS=Homo sapiens GN=DDX6 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26 Identity = 66/159 (41.51%), Postives = 90/159 (56.60%), Query Frame = -2 Query: 338 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 814 Y ++E +K LN L L NQ +IF S R L K + + + IH+ M QE R + F+ G R LV TDL RGIDI+ VN+VIN+D P A+TYLHR+GR+GRFG GLAI + + D L ++ + +IK +P ID S Y+ Sbjct: 313 YAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLI-TYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYV 470
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: DDX6_CHICK (Probable ATP-dependent RNA helicase DDX6 OS=Gallus gallus GN=DDX6 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26 Identity = 66/159 (41.51%), Postives = 90/159 (56.60%), Query Frame = -2 Query: 338 YIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDTSTYM 814 Y ++E +K LN L L NQ +IF S R L K + + + IH+ M QE R + F+ G R LV TDL RGIDI+ VN+VIN+D P A+TYLHR+GR+GRFG GLAI + + D L ++ + +IK +P ID S Y+ Sbjct: 313 YAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLI-TYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYV 470
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: IF4A_DICDI (Eukaryotic initiation factor 4A OS=Dictyostelium discoideum GN=tifA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.118e-26 Identity = 56/138 (40.58%), Postives = 87/138 (63.04%), Query Frame = -2 Query: 365 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELP 778 L D+ D+L Q VIF + + +L + + + NF +H M Q+ER K F+ G R+L+ TD++ RGID+++V++VINYD+P + Y+HR+GR+GRFG KG+AI FV + SD IL ++ + I E+P Sbjct: 262 LCDIYDSLTITQAVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENYIHRIGRSGRFGRKGVAINFVKN-SDIRILRDIEQFYSTQIDEMP 398
BLAST of CN185346 vs. ExPASy Swiss-Prot
Match: FAL1_VANPO (ATP-dependent RNA helicase FAL1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=FAL1 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.118e-26 Identity = 55/143 (38.46%), Postives = 91/143 (63.64%), Query Frame = -2 Query: 350 LNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDILNQVQARFEVDIKELPEQIDT 778 L DL D+L Q VIF + + L+ L + NF + +H M QE+R F+ G+ R+L++TD+ RGID+++V++VINYD+P+ + Y+HR+GR+GRFG KG+AI F++S SD + +++ + + I +P + T Sbjct: 256 LCDLYDSLTITQCVIFCNTKKKVDWLSAKLTQSNFAVVSMHGDMKQEDRNKVMSDFRSGHSRVLISTDVWARGIDVQQVSLVINYDIPEIMENYIHRIGRSGRFGRKGVAINFITS-SDLSKMKEIEKYYRIKISPVPADLST 397 The following BLAST results are available for this feature:
BLAST of CN185346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185346 ID=CN185346; Name=CN185346; organism=Citrus sinensis; type=EST; length=815bpback to top |