CN185333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH602_GLUDA (60 kDa chaperonin 2 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL2 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.799e-21 Identity = 49/101 (48.51%), Postives = 74/101 (73.27%), Query Frame = -2 Query: 373 NDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMP 675 ND++++G DIV++AL PL+ IA NAG +G+VV+ KVL + + +G++A G ++DL+AAGIIDPTKVVR L+ A+SV + ++ +V E EP+PA P Sbjct: 433 NDDQRIGGDIVRKALQAPLRQIAENAGEDGAVVAGKVLENGAYNFGFDAQIGEFKDLVAAGIIDPTKVVRTALQDAASVGSLLITTEVLVTEKAEPKPAAP 533
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: RUBA_PEA (RuBisCO large subunit-binding protein subunit alpha, chloroplastic OS=Pisum sativum PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 53/109 (48.62%), Postives = 77/109 (70.64%), Query Frame = -2 Query: 370 AIKETLDNDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPA 696 AIKE L++ +E++GADIV++AL P LIA NAG+ G VV EK+ + + + GYNA T YE+L+ +G+IDP KV RC L++A+SVA L + +VVE +P+ A+ A Sbjct: 473 AIKEKLEDADERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIKNGE-WEVGYNAMTDTYENLVESGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKPKAAVAA 580
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH60_BACTN (60 kDa chaperonin OS=Bacteroides thetaiotaomicron GN=groL PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 53/106 (50.00%), Postives = 70/106 (66.04%), Query Frame = -2 Query: 361 DNDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNP 678 DN +E G I+KRA+ PL+ I NAG G+VV +KV +GYNA T YE+L AAG++DP KV R LE+A+S+A FL ++CV+VE KE +P MP G P Sbjct: 432 DNADETTGIGIIKRAIEEPLREIVANAGKEGAVVVQKVREGKGD-FGYNARTDVYENLHAAGVVDPAKVARVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAP 536
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH602_SYNPW (60 kDa chaperonin 2 OS=Synechococcus sp. (strain WH7803) GN=groL2 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 53/111 (47.75%), Postives = 75/111 (67.57%), Query Frame = -2 Query: 337 EEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 669 EE +GA+IV AL PL IA NAGVNG+VV+E V + ++ GYNAA G+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG M + Y Sbjct: 435 EELIGANIVAAALTAPLMRIAENAGVNGAVVAENVKAKSFNE-GYNAANGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKEAAPAGGGMGGGDFDY 544
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH602_BRAJA (60 kDa chaperonin 2 OS=Bradyrhizobium japonicum GN=groL2 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 49/112 (43.75%), Postives = 74/112 (66.07%), Query Frame = -2 Query: 340 NDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 675 ND++K G +IV++AL YP + IAINAG +GSV+ K+L D + YGY++ TG Y +L++ GIIDPTKVVR +++A+SVA + ++ +V E+ + G P G G Sbjct: 433 NDDQKTGVEIVRKALSYPARQIAINAGEDGSVIVGKILEKDQYSYGYDSQTGEYGNLVSKGIIDPTKVVRVAIQNAASVAALLITTEAMVAEVPKKNTG-AGGMPPGGGGMG 543
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH602_ANADE (60 kDa chaperonin 2 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=groL2 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21 Identity = 54/110 (49.09%), Postives = 71/110 (64.55%), Query Frame = -2 Query: 346 NDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 675 N+ EKVG DIV+RA+ PL+ I+ N G GS+V KV + +G+NAATG YEDL+ AG+IDPTKV R L++A+SVA L + +V E + E A PAG M G Sbjct: 432 NEGEKVGLDIVRRAIEEPLRQISGNGGYEGSIVVNKVKEAKEAAFGFNAATGEYEDLVKAGVIDPTKVSRSALQNAASVASLMLTTMAMVAEKPKEESAAPAGGGMGGMG 541
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH601_SYNPX (60 kDa chaperonin 1 OS=Synechococcus sp. (strain WH8102) GN=groL1 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 54/111 (48.65%), Postives = 74/111 (66.67%), Query Frame = -2 Query: 337 EEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 669 EE +GA+IV AL PL IA NAG NG+VV+E V S + GYNAATG+Y D++AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG M + Y Sbjct: 435 EELIGANIVAAALTAPLMRIAENAGANGAVVAENVKSRAISE-GYNAATGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGGGMGGGDFDY 544
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH60_PARD8 (60 kDa chaperonin OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=groL PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 53/113 (46.90%), Postives = 71/113 (62.83%), Query Frame = -2 Query: 340 DNDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 678 DN++E G +IVKRA+ PL+ I NAG G+V+ +KV +GYNA +E+L AG+IDP KV R LE+A+S+A FL ++CV+ E KE PAMP NP G G Sbjct: 432 DNEDETTGIEIVKRAIEEPLRQIVANAGKEGAVIVQKVKEGKGD-FGYNARKDCFENLCEAGVIDPAKVTRVALENAASIAGMFLTTECVIAEKKEETPAMPPMNPGMGGGMG 543
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH602_RHIEC (60 kDa chaperonin 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL2 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.008e-21 Identity = 52/109 (47.71%), Postives = 72/109 (66.06%), Query Frame = -2 Query: 355 NDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 675 ND+++VG DIV+RA+ P++ IA NAG GS++ K+ + YG+NA TG Y DL A G+IDP KVVR L+ A+SVA + ++ ++ E KE PAMPAG MD Sbjct: 433 NDDQRVGVDIVRRAIEAPVRQIAENAGAEGSIIVGKLREKSDFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASVAGLLVTTEAMIAEKPKKEAAPAMPAGAGMD 541
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH60_CAMFF (60 kDa chaperonin OS=Campylobacter fetus subsp. fetus (strain 82-40) GN=groL PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.836e-21 Identity = 55/108 (50.93%), Postives = 71/108 (65.74%), Query Frame = -2 Query: 346 EEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 669 +E +GA+IVKRAL PL+ IA NAG + VV+ V +D YG+NAA+G Y D+ AGIIDP KV R L++A SVA L ++ V EIKE +PAMP PM + G Sbjct: 432 DELIGAEIVKRALFAPLRQIAENAGFDAGVVANSVSCADCPNYGFNAASGEYVDMFEAGIIDPVKVERIALQNAVSVASLLLTTEATVSEIKEDKPAMP---PMPDMG 536 The following BLAST results are available for this feature:
BLAST of CN185333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185333 ID=CN185333; Name=CN185333; organism=Citrus sinensis; type=EST; length=697bpback to top |