CN185333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH60_NITSB (60 kDa chaperonin OS=Nitratiruptor sp. (strain SB155-2) GN=groL PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20 Identity = 52/110 (47.27%), Postives = 71/110 (64.55%), Query Frame = -2 Query: 340 EEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 669 +EK+GA+I+ RA+ PLK IA NAG + VV+ V +++N G+NAATG Y D+ AGI+DP KV R L++A SVA L ++ V EIKE +PA PA + G G Sbjct: 434 DEKIGAEIILRAIKAPLKQIAENAGFDPGVVANNVENAENENTGFNAATGEYVDMFEAGIVDPAKVERVALQNAVSVASLLLTTEATVSEIKEDKPAAPAPDMGGMGGMG 543
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH60_DICDI (60 kDa heat shock protein, mitochondrial OS=Dictyostelium discoideum GN=hspA PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20 Identity = 55/108 (50.93%), Postives = 72/108 (66.67%), Query Frame = -2 Query: 373 KETLDNDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE--PEPAMP 690 K +DN ++ +G IV+ AL P K IA NAGV GSVV ++LS + +YGYNA G YE+++ AGIIDPTKVVR L A+SVA ++ +VVEIK+ P P MP Sbjct: 444 KIKMDNFDQTIGVKIVRDALLIPCKTIANNAGVEGSVVIGRLLSKRDFEYGYNAQKGVYENMIQAGIIDPTKVVRTALIDAASVASLMTTTEAMVVEIKKDTPMPQMP 551
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH60_CHLP8 (60 kDa chaperonin OS=Chlorobaculum parvum (strain NCIB 8327) GN=groL PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20 Identity = 53/118 (44.92%), Postives = 75/118 (63.56%), Query Frame = -2 Query: 340 KETLDNDEEKVGADIVKRALCYPLKLIAINAGV-NGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 690 + T DND++K G DI++RAL PL+ I N G +G+VV EKV S + YG+NA T YE+L+ AG++DPTKV R LE+A+SVA L ++ + ++ E + MPA P G G Sbjct: 428 RATADNDDQKTGIDIIRRALEEPLRQIVANTGTTDGAVVLEKVRSGEGD-YGFNARTEEYENLVDAGVVDPTKVTRSALENAASVASILLTTEAAITDLPEDKADMPAMPPGGMGGMG 544
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH601_NITHX (60 kDa chaperonin 1 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=groL1 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.989e-20 Identity = 46/106 (43.40%), Postives = 74/106 (69.81%), Query Frame = -2 Query: 367 NDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPE---PAMPAG 675 ND++K G +IV++AL P + IAINAG +GS++ K+L + + YG+++ TG Y +L++ GIIDPTKVVR +++A+SVA + ++ +V E+ + PAMP G Sbjct: 433 NDDQKTGVEIVRKALSAPARQIAINAGEDGSIIVGKILEKEQYSYGFDSQTGEYVNLISKGIIDPTKVVRAAIQNAASVAALLITTEAMVAELPKKNAAAPAMPGG 538
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH60_HYPNA (60 kDa chaperonin OS=Hyphomonas neptunium (strain ATCC 15444) GN=groL PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 50/112 (44.64%), Postives = 71/112 (63.39%), Query Frame = -2 Query: 340 NDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 675 ND+EK G DIV++AL P++ IA NAGV GSVV +L++ + YG+NA T Y DL+A G+IDP KVVR L++A+S+A + ++ + E + E A G P G G Sbjct: 432 NDDEKAGIDIVRKALEAPIRQIAENAGVEGSVVVNTILNNKSRSYGFNAQTEEYGDLVAMGVIDPVKVVRSALQNAASIASLLITTEAGIAEAPKKESAGGGGMPGGMGGMG 543
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH60_DESDA (60 kDa chaperonin OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=groL PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 53/112 (47.32%), Postives = 74/112 (66.07%), Query Frame = -2 Query: 340 NDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 675 +D+E G +I++RA+ PL+ IA+NAG GS+V EKV + +G+NAATG YEDL+ AG+IDP KV R L++A+SVA L ++C + E +PEP A P D G G Sbjct: 433 DDDELAGVNIIRRAIEEPLRQIALNAGFEGSIVVEKVREGKDG-FGFNAATGEYEDLIKAGVIDPKKVTRTALQNAASVASLLLTTECAIAE--KPEPKKDAAMP-DMGGMG 540
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH60_AQUAE (60 kDa chaperonin OS=Aquifex aeolicus GN=groL PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 50/99 (50.51%), Postives = 71/99 (71.72%), Query Frame = -2 Query: 391 DNDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHK---YGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE 678 DN ++++G DI+K+A+ PLK IA NAG +GSVV EKV+ K +G+NAATG Y D+ AGIIDPTKVVR +E+A+SVA T L ++ ++ ++ E Sbjct: 432 DNHDQQLGIDIIKKAVRTPLKQIAYNAGYDGSVVLEKVIELGKEKGVSWGFNAATGEYVDMYEAGIIDPTKVVRTAIENAASVAGTMLTAEALIADLPE 530
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH604_RHIEC (60 kDa chaperonin 4 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL4 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 52/109 (47.71%), Postives = 71/109 (65.14%), Query Frame = -2 Query: 355 NDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVE--IKEPEPAMPAGNPMD 675 ND+++VG +IV+RAL P + IA NAG GSVV K+ + YG+NA TG + DL A G+IDP KVVR L+ ASS+A + ++ ++ E K+ PAMPAG MD Sbjct: 433 NDDQRVGVEIVRRALEAPARQIAENAGAEGSVVVGKLREKSDFSYGWNAQTGEFGDLYAQGVIDPAKVVRTALQDASSIAGLLVTTEAMIAEKPKKDAPPAMPAGAGMD 541
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH602_SYNJB (60 kDa chaperonin 2 OS=Synechococcus sp. GN=groL2 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 53/99 (53.54%), Postives = 71/99 (71.72%), Query Frame = -2 Query: 379 NDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPA 675 N EE+VGA+IV RAL PL IA NAG+ GSVV EKVL + +G++A TG Y D+ A GI+DP KVVR L++A+S+A +L ++ +VVE EP+PA Sbjct: 433 NAEEQVGAEIVYRALQAPLFQIAHNAGLEGSVVVEKVLEKEM-PFGFDALTGTYVDMFAQGIVDPAKVVRSALQNAASIAGMYLTTEAIVVEKPEPKPA 530
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH602_ERYLH (60 kDa chaperonin 2 OS=Erythrobacter litoralis (strain HTCC2594) GN=groL2 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = -2 Query: 340 DNDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 678 +ND++ G DIV++A+ P++ IA NAG +G+V+S +L DN G+NAAT YEDL+ AG+IDPTKVVR L+ A+SVA + ++ + E+ PE G D G G Sbjct: 432 ENDDQTRGIDIVRKAIVAPVRQIATNAGHDGAVISGNLLREDNESQGFNAATDTYEDLVKAGVIDPTKVVRVALQDAASVAGLLITTEAAISEV--PEDKSSGGGMPDMGGMG 542 The following BLAST results are available for this feature:
BLAST of CN185333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185333 ID=CN185333; Name=CN185333; organism=Citrus sinensis; type=EST; length=697bpback to top |