CN185333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH60_DESVV (60 kDa chaperonin OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=groL PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20 Identity = 49/110 (44.55%), Postives = 70/110 (63.64%), Query Frame = -2 Query: 346 NDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 675 +D+E G +I++RA+ PL+ IA NAG GS+V E+V + +G+NAATG YEDL+ G+IDP KV R L++A+SVA L ++C + E EP+ MP M G Sbjct: 433 DDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVREGKDG-FGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMPMPGGMGGMG 541
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH60_DESVH (60 kDa chaperonin OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=groL PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20 Identity = 49/110 (44.55%), Postives = 70/110 (63.64%), Query Frame = -2 Query: 346 NDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 675 +D+E G +I++RA+ PL+ IA NAG GS+V E+V + +G+NAATG YEDL+ G+IDP KV R L++A+SVA L ++C + E EP+ MP M G Sbjct: 433 DDDETAGVNIIRRAIEEPLRQIASNAGFEGSIVVERVREGKDG-FGFNAATGEYEDLIGVGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPEPKKDMPMPGGMGGMG 541
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH60_CLONN (60 kDa chaperonin OS=Clostridium novyi (strain NT) GN=groL PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20 Identity = 56/121 (46.28%), Postives = 79/121 (65.29%), Query Frame = -2 Query: 346 AIKE----TLDNDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 696 AIKE T DN E ++G I++RAL P++ IA NAG+ GSV+ +K+ +S++ G++A G Y ++M GI+DP KV R L++A+SVA TFL ++CVV EI E P MPA M G Sbjct: 420 AIKEVEKLTDDNAEVRLGIAIIRRALEEPVRQIAANAGLEGSVIIDKIKNSEDG-IGFDALEGEYTNMMQKGIVDPAKVTRSALQNAASVASTFLTTECVVAEIPEKNP-MPAAPGMGGMG 538
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH60_BACFO (60 kDa chaperonin OS=Bacteroides forsythus GN=groL PE=1 SV=3) HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20 Identity = 52/111 (46.85%), Postives = 69/111 (62.16%), Query Frame = -2 Query: 346 DNDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSG 678 +N++E G +IVKRA+ PL+ I NAG G+VV +KV +GYNA T YEDL AG++DP KV R LE+A+S+A FL ++CVV + KE PA P M G Sbjct: 432 ENEDETTGIEIVKRAIEEPLRQIVNNAGKEGAVVVQKVKEGTG-AFGYNARTDVYEDLSEAGVVDPAKVTRIALENAASIAGMFLTTECVVADKKEEAPAPPMNPGMGGMG 541
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH606_BRAJA (60 kDa chaperonin 6 OS=Bradyrhizobium japonicum GN=groL6 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20 Identity = 48/109 (44.04%), Postives = 74/109 (67.89%), Query Frame = -2 Query: 358 NDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKE---PEPAMPAGNPM 675 ND++K G +IV++AL P + IAINAG +GSV+ K+L + + YG+++ TG Y +L+ GIIDPTKVVR +++A+SVA + ++ +V E+ + PAMP G M Sbjct: 433 NDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILENKTYAYGFDSQTGEYVNLVTKGIIDPTKVVRTAIQNAASVAALLITTEAMVAELPKKGGAGPAMPPGGGM 541
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH602_PROMP (60 kDa chaperonin 2 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groL2 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.787e-20 Identity = 54/122 (44.26%), Postives = 79/122 (64.75%), Query Frame = -2 Query: 337 IKETLD---NDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYGY 693 +KE D + EE +GA+IV+ +L PL IA NAG NG+V++E V S + G+NAATG+Y D+ AAGI+DP KV R L++A+S+A L ++C+V ++ E + A PAG P + Y Sbjct: 424 LKEWADKALSGEELIGANIVEASLTSPLMRIAENAGSNGAVIAENVKSKPFND-GFNAATGDYVDMSAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGAPGMGGDFDY 544
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH60_PROVI (60 kDa chaperonin OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=groL PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20 Identity = 52/114 (45.61%), Postives = 73/114 (64.04%), Query Frame = -2 Query: 340 DNDEEKVGADIVKRALCYPLKLIAINAGV-NGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 678 DND++K G +I++RAL PL+ I N G +G+VV E V + + YG+NA T YE+L+ AG++DPTKV R LE+A+SVA L ++ + +IKE P MPA P G G Sbjct: 432 DNDDQKTGIEIIRRALEEPLRQIVANTGTTDGAVVLEHVKNGEGD-YGFNARTEQYENLVEAGVVDPTKVTRSALENAASVASILLTTEACITDIKENTPDMPAMPPGGMGGMG 544
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH601_SYNY3 (60 kDa chaperonin 1 OS=Synechocystis sp. (strain PCC 6803) GN=groL1 PE=1 SV=4) HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20 Identity = 56/110 (50.91%), Postives = 73/110 (66.36%), Query Frame = -2 Query: 343 DEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGY 672 DEE GA IV RAL PLK IA NAG NG+V+SE+V + GYNAA+ Y D++AAGI+DP KV R L++A+S+A L ++C+VV+ E E A PAG P + Y Sbjct: 434 DEELTGALIVARALPAPLKRIAENAGQNGAVISERVKEKE-FNVGYNAASLEYVDMLAAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEKEKA-PAGAPGGDFDY 541
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH601_SALTO (60 kDa chaperonin 1 OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=groL1 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20 Identity = 55/101 (54.46%), Postives = 67/101 (66.34%), Query Frame = -2 Query: 367 EEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAG 669 +E GA IVK AL PL+ IA+NAG+ G VV E V + +G NAATG Y DLMAAGIIDP KV R L++ASS+A FL ++ VV + E PA PAG Sbjct: 433 DEATGAQIVKIALDGPLRQIAVNAGLEGGVVVEHVRGIEAG-HGLNAATGGYVDLMAAGIIDPAKVTRSALQNASSIAALFLTTEAVVADKPEKTPAAPAG 532
BLAST of CN185333 vs. ExPASy Swiss-Prot
Match: CH601_RHOPB (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=groL1 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.558e-20 Identity = 46/112 (41.07%), Postives = 74/112 (66.07%), Query Frame = -2 Query: 340 NDEEKVGADIVKRALCYPLKLIAINAGVNGSVVSEKVLSSDNHKYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPEPAMPAGNPMDNSGYG 675 ND++K G +IV++AL +P + IAINAG +GSV+ K+L D + YG+++ +G Y D++ GIIDPTKVVR +++A+SVA + ++ ++ E+ + A G P G G Sbjct: 433 NDDQKTGVEIVRKALSWPARQIAINAGEDGSVIVGKILEKDQYSYGFDSQSGEYGDMVKKGIIDPTKVVRAAIQNAASVAALLITTEAMIAELPKKGNA-GGGMPPGGGGMG 543 The following BLAST results are available for this feature:
BLAST of CN185333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN185333 ID=CN185333; Name=CN185333; organism=Citrus sinensis; type=EST; length=697bpback to top |