CN185317

Overview
NameCN185317
Unique NameCN185317
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1781 contig Csv1_Contig1781:4..881. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: RBBP7_PONAB (Histone-binding protein RBBP7 OS=Pongo abelii GN=RBBP7 PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.722e-71
Identity = 122/191 (63.87%), Postives = 153/191 (80.10%), Query Frame = 1
Query:  304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+  +P GKDY++  ++LGTHTS+ E N+L++A+V +P DD++ DA H D D+ +FGGFG   GK++   +INH+GEVNRARYMPQNP +IATKT S+ V VFDY+KHP+KP   G C+PDLRLRGH  E YGLSW+    GHLLS SDD  +CL
Sbjct:   14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCL 203          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: RBBP7_BOVIN (Histone-binding protein RBBP7 OS=Bos taurus GN=RBBP7 PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.722e-71
Identity = 121/191 (63.35%), Postives = 154/191 (80.63%), Query Frame = 1
Query:  304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+  +P GKDY++  ++LGTHTS+ E N+L++A+V +P DD++ DA H D ++ +FGGFG   GK++   +INH+GEVNRARYMPQNP +IATKT S++V VFDY+KHP+KP   G C+PDLRLRGH  E YGLSW+    GHLLS SDD  +CL
Sbjct:   14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCL 203          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: RBBD_DICDI (Probable histone-binding protein rbbD OS=Dictyostelium discoideum GN=rbbD PE=3 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 8.905e-70
Identity = 119/191 (62.30%), Postives = 153/191 (80.10%), Query Frame = 1
Query:  304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            ++INEEYKIWK++TPFLYD+VITHALEWPSLTV WLP +   P K YS++K+ILGTHTS+ E NYLM+A+V LP+D++  ++  YDD + + GG G  + K++IIQ+INH+GEVNRAR MPQN  +IATKTVS+EVY+FD +KHP +P  DG CSP+L+L GH  E YG+SW+  KEGHLLS SDD  IC+
Sbjct:   11 KVINEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLPVKTSQPNKPYSIEKVILGTHTSDEEQNYLMVAKVHLPVDEASIESLKYDDTKGEVGGIGNVSEKIEIIQKINHEGEVNRARVMPQNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCSPNLKLTGHKKEGYGISWNPRKEGHLLSCSDDQSICM 201          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: HAT2_USTMA (Histone acetyltransferase type B subunit 2 OS=Ustilago maydis GN=HAT2 PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 3.068e-62
Identity = 105/199 (52.76%), Postives = 140/199 (70.35%), Query Frame = 1
Query:  304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLD---------DSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQIC 873
            +L NEEYKIWKKN+PFLYDLV+THALEWPSLT +WLPD+E P G+ Y+  +++LGTHTS  + NYL  AQVQLP           +S  D + YD+D+ + G +     ++ I+Q+INHDGE+NRARY PQN  LIAT++V+ + Y+FD +KH + P  DG C PD+ L G   E YGLSWS  K+GH+L+ S+D  +C
Sbjct:   69 KLSNEEYKIWKKNSPFLYDLVVTHALEWPSLTCQWLPDKESPAGQSYTQHRLLLGTHTSGQDQNYLQFAQVQLPTTGADGASNSAESRLDLKQYDEDKGEIGSYSATTARLSIVQKINHDGEINRARYCPQNCDLIATRSVTGKTYIFDRTKHSNTPSADGVCRPDIILEGQHKEGYGLSWSPLKQGHILAASEDTTVC 267          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: LIN53_CAEBR (Probable histone-binding protein lin-53 OS=Caenorhabditis briggsae GN=lin-53 PE=3 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 4.007e-62
Identity = 111/190 (58.42%), Postives = 151/190 (79.47%), Query Frame = 1
Query:  304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQIC 873
            R+ N+EYKIWKKNTPFLYDLV+THALEWPSL+V+WLP+ E+    D++V ++ILGTHTS+ E N+L+++++ +P D+++ DA  YD +R +FGGFG  NGKV+   +INH+GEVNRARYMPQ P +IATK+ SA+VY+FDY+K+PS P  D   +P L+L+GH+ E YGLSW+  KEG +LS SDD  +C
Sbjct:   12 RVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEIEKE-SSDHTVHRLILGTHTSD-EQNHLLISKICMPTDEAQFDASRYDTERGEFGGFGAVNGKVEPDIRINHEGEVNRARYMPQKPTIIATKSPSADVYIFDYTKYPSVPK-DNTFNPLLKLKGHTKEGYGLSWNPNKEGLILSASDDQTVC 198          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: LIN53_CAEEL (Probable histone-binding protein lin-53 OS=Caenorhabditis elegans GN=lin-53 PE=1 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 3.750e-60
Identity = 109/190 (57.37%), Postives = 147/190 (77.37%), Query Frame = 1
Query:  304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQIC 873
            R+ N+EYKIWKKNTPFLYDLV+THALEWPSL+V+WLPD  +    D+++ ++ILGTHTS+ E N+L+++++ +P DD++ DA  YD +RS++GGFG  NGKV+   +INH+GEVNRARYMPQ   +IATK+  A+VY+FDY KH S  P D   +P +RL+GH+ E YGLSW+  KEG +LS SDD  +C
Sbjct:   12 RVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKD-NSDHTIHRLILGTHTSD-EQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKH-SAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVC 198          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: HAT2_CRYNE (Histone acetyltransferase type B subunit 2 OS=Cryptococcus neoformans GN=HAT2 PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.431e-59
Identity = 107/191 (56.02%), Postives = 139/191 (72.77%), Query Frame = 1
Query:  310 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND----ARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQI 870
            INE+YK+WKKNTPFLYD VITHAL WPSLT +WLPD  + P  DY+ Q++I+GTHTS    ++L++A+V LP   +       A  YD+++ + G +  +  +++ IQ INH GEVNRARYMPQNP LIATKTV+ EVYVFD +KH SK P +G C PD+RL+G + E YGLSW+  KEGH+LS S+D  I
Sbjct:   25 INEQYKVWKKNTPFLYDTVITHALTWPSLTCQWLPDITDVPDTDYTSQRLIIGTHTSGQANDHLIIAEVLLPKKGAGISDKALADLYDEEKQEIGSYTASPARIRAIQTINHAGEVNRARYMPQNPELIATKTVTGEVYVFDRTKHESKAPANGECKPDIRLKGQTKEGYGLSWNALKEGHILSASEDTTI 215          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: HAT2_ASPOR (Histone acetyltransferase type B subunit 2 OS=Aspergillus oryzae GN=hat2 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.204e-52
Identity = 97/197 (49.24%), Postives = 135/197 (68.53%), Query Frame = 1
Query:  304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKV------QIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            ++INEEYK WKKN PFLYD++++ ALEWP+LT +WLPD++E P K YS  +++LGTHTS +  NYL +A VQLP + S  +   YD++R + GG+G ++ K        I+Q+I+H GEVN+ARY PQNP +IAT      V ++D SKHPS P   G  +P + L GH+ E +GLSWS    GHL++GS+D  + L
Sbjct:   23 KVINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQEVPDKPYSTHRLLLGTHTSSDAQNYLQIAHVQLP-NPSAPNPDDYDEERGEIGGYGGSSKKAPMEIKFNIVQKIDHKGEVNKARYQPQNPNVIATMCTDGRVMIWDRSKHPSLP--TGTVNPQMELLGHTKEGFGLSWSPHTAGHLVTGSEDKTVRL 216          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: HAT2_ASPFU (Histone acetyltransferase type B subunit 2 OS=Aspergillus fumigatus GN=hat2 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 5.428e-51
Identity = 95/195 (48.72%), Postives = 132/195 (67.69%), Query Frame = 1
Query:  304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKV------QIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQI 870
            ++INEEYK WKKN PFLYD++++ ALEWP+LT +WLPD++E P K YS  ++++GTHTS +  NYL +A VQLP + S  +   YD++R + GG+G ++ K        I+Q+I+H GEVN+ARY PQNP +IAT      V V+D SKHPS P   G  +P + L GH+ E +GLSWS    G L +GS+D  +
Sbjct:   23 KIINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQEVPDKPYSTHRLLIGTHTSSDAQNYLQIAHVQLP-NPSAPNPDDYDEERGEIGGYGGSSKKAPMEIKFNIVQKIDHKGEVNKARYQPQNPNIIATMCTDGRVMVWDRSKHPSLP--TGQVNPQMELIGHTKEGFGLSWSPHTAGQLATGSEDKTV 214          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: HAT2_NEUCR (Histone acetyltransferase type B subunit 2 OS=Neurospora crassa GN=hat-2 PE=3 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.579e-50
Identity = 96/198 (48.48%), Postives = 138/198 (69.70%), Query Frame = 1
Query:  304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFG--CANG-----KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            RLINEEYKIWKKN+PFLYD++++ ALEWP+LT +W PD + P  K ++V +++LGTHT+E +PNYL +A+V++P    E + R YD++R + GG+G   ++G     + +I Q+I+H GEVN+ARY PQNP +IAT  V   V +FD +KH   P   G  SP L L GH  E +GL+W+  +EG L++GS+D  + L
Sbjct:   24 RLINEEYKIWKKNSPFLYDMMLSTALEWPTLTTQWFPDVKNPKDKSHTVHRLLLGTHTAEGKPNYLQIAEVEIP-KMVELNPRDYDEERGEIGGYGSKASSGEPLCIRFKITQKIDHPGEVNKARYQPQNPDIIATLAVDGRVLIFDRTKHSITP--SGTPSPQLELIGHKEEGFGLNWNPHEEGCLVTGSEDKTVLL 218          
The following BLAST results are available for this feature:
BLAST of CN185317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
RBBP7_PONAB4.722e-7163.87Histone-binding protein RBBP7 OS=Pongo abelii GN=R... [more]
RBBP7_BOVIN4.722e-7163.35Histone-binding protein RBBP7 OS=Bos taurus GN=RBB... [more]
RBBD_DICDI8.905e-7062.30Probable histone-binding protein rbbD OS=Dictyoste... [more]
HAT2_USTMA3.068e-6252.76Histone acetyltransferase type B subunit 2 OS=Usti... [more]
LIN53_CAEBR4.007e-6258.42Probable histone-binding protein lin-53 OS=Caenorh... [more]
LIN53_CAEEL3.750e-6057.37Probable histone-binding protein lin-53 OS=Caenorh... [more]
HAT2_CRYNE2.431e-5956.02Histone acetyltransferase type B subunit 2 OS=Cryp... [more]
HAT2_ASPOR2.204e-5249.24Histone acetyltransferase type B subunit 2 OS=Aspe... [more]
HAT2_ASPFU5.428e-5148.72Histone acetyltransferase type B subunit 2 OS=Aspe... [more]
HAT2_NEUCR1.579e-5048.48Histone acetyltransferase type B subunit 2 OS=Neur... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001C10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185317 ID=CN185317; Name=CN185317; organism=Citrus sinensis; type=EST; length=878bp
GGGGGGGAAGCTAGCGGGCCCCCTCGCTTCTTTGTCGTTTTTTGGGTTCT
ATTTCGTCGAGAGAAAGGGAGCAATCGGTTCATCTGCTGAGATAGAGGTT
TTGGCGCCGTTTCCTCCTCCGCTCGCCAGTTCCATTTTAATAATAATTTA
CCGTTAGGGGAAGCAAATAATTGTAAAAGCAGATGAATGGAGTTGCATCT
ACCTCAGTTGCAGAAGTAGGACTTTGGCGGCAACAAAACTTAAGAAATTG
AGCGAAGAGCAATGGGAAAAGACGAGGAAGAGATGAGGGGAGAGATAGAA
GAGAGGTTGATAAATGAAGAATACAAGATTTGGAAGAAGAACACTCCGTT
TCTGTATGATCTTGTCATCACACATGCCCTTGAATGGCCTTCTCTGACTG
TTGAGTGGTTGCCTGATAGAGAAGAACCCCCTGGCAAAGACTATTCTGTT
CAGAAAATGATCCTTGGGACACACACATCTGAGAATGAGCCCAACTATCT
CATGCTTGCTCAGGTCCAGCTTCCTCTTGATGACTCAGAGAATGATGCCC
GCCATTACGATGATGACCGCTCTGATTTTGGTGGCTTTGGCTGTGCCAAT
GGCAAGGTGCAAATAATTCAGCAAATAAACCATGATGGAGAGGTTAACCG
GGCCCGTTATATGCCTCAGAATCCATTTCTTATTGCCACGAAGACTGTTA
GTGCTGAGGTCTATGTTTTTGATTATAGCAAACACCCTTCTAAACCTCCT
CTGGATGGTGCATGTAGTCCTGATCTGAGGCTGAGGGGCCATAGCACTGA
ANGATACGGTTTATCGTGGAGCAAGTTCAAGGAAGGTCATCTGTTAAGTG
GTTCTGATGATGCTCAAATATGTTTATG
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