CN185317

Overview
NameCN185317
Unique NameCN185317
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1781 contig Csv1_Contig1781:4..881. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: HAT2_YEAST (Histone acetyltransferase type B subunit 2 OS=Saccharomyces cerevisiae GN=HAT2 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 4.943e-28
Identity = 69/189 (36.51%), Postives = 101/189 (53.44%), Query Frame = 1
Query:  310 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            ++EEY +WK N P +YD V    L WPSLTV+WLP   +     +  Q++I+GTHTS  E NYL  A++ LP +   N+    +               ++I  +  H+ E+ RARYMPQ+P ++A  T++ +  VF YS+       +G  S    L+ H    Y LS+S   +G LLSGSDD  + L
Sbjct:   10 VDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQELDGGFIKQELIIGTHTSGEEENYLKFAEINLPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITAKYEHEEEITRARYMPQDPNIVA--TINGQGTVFLYSRS------EGLQS---TLKFHKDNGYALSFSTLVKGRLLSGSDDHTVAL 187          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: HAT2_ASHGO (Histone acetyltransferase type B subunit 2 OS=Ashbya gossypii GN=HAT2 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.892e-26
Identity = 68/189 (35.98%), Postives = 94/189 (49.74%), Query Frame = 1
Query:  310 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            + EEY++W  N P +Y+ V    L WPSLT++WLP   + P      Q +I GTHT+  E NYL +A + LP   +  D    +D+ +D   F  AN       +  H  EV RARYMP N  +IAT      + +FD +   SK  +         L  H    YGL+++    G LLSGSDD  + L
Sbjct:   44 VEEEYELWNSNVPVMYEFVSETKLTWPSLTIQWLPSDGQSP-----EQSLIFGTHTAGEEVNYLKVATINLPAGIAGLDQGDEEDEANDHSSFAIAN-------KFPHIEEVIRARYMPANSNIIATINGKGTISIFDRTLEESKAQVS-------TLAFHKENGYGLAFNPHISGELLSGSDDTTVAL 213          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: HAT2_YARLI (Histone acetyltransferase type B subunit 2 OS=Yarrowia lipolytica GN=HAT2 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.260e-23
Identity = 65/194 (33.51%), Postives = 106/194 (54.64%), Query Frame = 1
Query:  304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLP--LDDSENDARHYDDDRSDFGGFGCANG---KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQI 870
            + INEEYKIWKKN+P+LY++VI   ++ P+LTVEWLPD  +         +++ G+H+S  + +Y+ +A V+LP  L           +  +D      A+G   ++ I+Q I  DGEVN ARY P     IA   V+ ++++FD +   +         P   L+ H+ E +GL+W+      L+SG+ D+ +
Sbjct:   42 KAINEEYKIWKKNSPYLYNVVIATVMDHPTLTVEWLPDLFDDITPGSMSARLMFGSHSSGLDKDYIHVASVELPTHLRPETIGLLSQQEGGTDMKQHHDAHGRHKRIAIVQSIYEDGEVNVARYNPLASKQIAAAHVTGDIHIFDRNNIMNSKE---EAKPIYNLKHHTKEGWGLNWNINHADQLVSGAIDSTV 232          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: HAT2_CANAL (Histone acetyltransferase type B subunit 2 OS=Candida albicans GN=HAT2 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 6.253e-23
Identity = 61/189 (32.28%), Postives = 97/189 (51.32%), Query Frame = 1
Query:  310 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            I EEY++W+KN  ++Y+ V   AL WPSLT++WLP+     G      K++LGTHTS    N L +A  QL  D +                   AN K++ +Q++ ++ E+ RARYMPQ+  ++AT     EV +++                      H+   YGLSW+  ++G L++G+DD  +C+
Sbjct:   11 IKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPNYTTTNG--LIDAKLLLGTHTSNQSANQLKVASTQLSADPNVK-----------------ANSKIKTVQKLENNAEICRARYMPQDANIVATINGLGEVDLYNLDTETRYS----------HFAPHTKNGYGLSWNPKQKGLLVTGADDNFVCV 170          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: PRW1_SCHPO (RbAp48-related WD40 repeat-containing protein prw1 OS=Schizosaccharomyces pombe GN=prw1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.431e-21
Identity = 66/192 (34.38%), Postives = 95/192 (49.48%), Query Frame = 1
Query:  304 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLP-LDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIAT-KTVSAEVYVFDYSKHPS-KPPLDGACSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQI 870
            + INEEYKIWKKN+PFLYDL+IT ALEWP ++++W P+++      Y+ QKM LG      +   L +A +QLP L+ +            D         +V I    +H   V  A+ MPQ+   +AT      +V VFD     S     +    P  RL  H+     + W+   +G L+SGS DA +
Sbjct:   24 KCINEEYKIWKKNSPFLYDLIITRALEWPCMSLQWYPEQQIFAEHGYTEQKMFLGVRADVGK-YLLAVASIQLPYLNQTVPPTTMEGASAGDESSL-----RVNISNLYSHPESVCSAKLMPQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRLTKHTQPCTSVCWNFLSKGTLVSGSQDATL 209          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: MSI4_ARATH (WD-40 repeat-containing protein MSI4 OS=Arabidopsis thaliana GN=MSI4 PE=1 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 7.911e-18
Identity = 63/194 (32.47%), Postives = 97/194 (50.00%), Query Frame = 1
Query:  310 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQ---VQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACS--PDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            ++E+Y  WK   P LYD +  H L WPSL+  W P  E+   K+   Q++ L   T  + PN L++A    V+  +  +E+ ++  ++ RS F         V+  + I H GEVNR R +PQN  ++AT T S +V ++D    P++  + GA +  PDL L GH             E  +LSG  D  + L
Sbjct:   64 VDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVL 246          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: MSI5_ARATH (WD-40 repeat-containing protein MSI5 OS=Arabidopsis thaliana GN=MSI5 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.263e-15
Identity = 59/191 (30.89%), Postives = 90/191 (47.12%), Query Frame = 1
Query:  310 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGA--CSPDLRLRGHSTEXYGLSWSKFKEGHLLSGSDDAQICL 876
            +++ Y  WK   P LYD  + H L WPSL+  W P  E+   K    Q++ L   T+ + PN L++A  +  ++   N+  H     S F         V+  + I H GEVNR R +PQN  ++AT T S ++ +++    P +  + GA    PDL L GH  +          E  +LSG  D  + L
Sbjct:   54 VDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGPQLEQAGSK---TQRLYLSEQTNGSVPNTLVIANCE-TVNRQLNEKAH-----SPF---------VKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAEFALAMCPTEPFVLSGGKDKSVIL 226          
BLAST of CN185317 vs. ExPASy Swiss-Prot
Match: MSI1_YEAST (Chromatin assembly factor 1 subunit p50 OS=Saccharomyces cerevisiae GN=MSI1 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.306e-14
Identity = 46/150 (30.67%), Postives = 77/150 (51.33%), Query Frame = 1
Query:  310 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEP--NYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGC----ANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPS 741
            + E Y  WKKNT  LYD + T++ +WPSLT ++ PD +    +     +++L + TS  +P    + ++++        +   ++D D  +F         +   V  I     +GE NRARY+PQNP +IA  +    +Y+FD +KH S
Sbjct:   19 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQKPEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNRARYLPQNPDIIAGASSDGAIYIFDRTKHGS 164          
The following BLAST results are available for this feature:
BLAST of CN185317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
HAT2_YEAST4.943e-2836.51Histone acetyltransferase type B subunit 2 OS=Sacc... [more]
HAT2_ASHGO7.892e-2635.98Histone acetyltransferase type B subunit 2 OS=Ashb... [more]
HAT2_YARLI1.260e-2333.51Histone acetyltransferase type B subunit 2 OS=Yarr... [more]
HAT2_CANAL6.253e-2332.28Histone acetyltransferase type B subunit 2 OS=Cand... [more]
PRW1_SCHPO3.431e-2134.38RbAp48-related WD40 repeat-containing protein prw1... [more]
MSI4_ARATH7.911e-1832.47WD-40 repeat-containing protein MSI4 OS=Arabidopsi... [more]
MSI5_ARATH1.263e-1530.89WD-40 repeat-containing protein MSI5 OS=Arabidopsi... [more]
MSI1_YEAST5.306e-1430.67Chromatin assembly factor 1 subunit p50 OS=Sacchar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001C10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185317 ID=CN185317; Name=CN185317; organism=Citrus sinensis; type=EST; length=878bp
GGGGGGGAAGCTAGCGGGCCCCCTCGCTTCTTTGTCGTTTTTTGGGTTCT
ATTTCGTCGAGAGAAAGGGAGCAATCGGTTCATCTGCTGAGATAGAGGTT
TTGGCGCCGTTTCCTCCTCCGCTCGCCAGTTCCATTTTAATAATAATTTA
CCGTTAGGGGAAGCAAATAATTGTAAAAGCAGATGAATGGAGTTGCATCT
ACCTCAGTTGCAGAAGTAGGACTTTGGCGGCAACAAAACTTAAGAAATTG
AGCGAAGAGCAATGGGAAAAGACGAGGAAGAGATGAGGGGAGAGATAGAA
GAGAGGTTGATAAATGAAGAATACAAGATTTGGAAGAAGAACACTCCGTT
TCTGTATGATCTTGTCATCACACATGCCCTTGAATGGCCTTCTCTGACTG
TTGAGTGGTTGCCTGATAGAGAAGAACCCCCTGGCAAAGACTATTCTGTT
CAGAAAATGATCCTTGGGACACACACATCTGAGAATGAGCCCAACTATCT
CATGCTTGCTCAGGTCCAGCTTCCTCTTGATGACTCAGAGAATGATGCCC
GCCATTACGATGATGACCGCTCTGATTTTGGTGGCTTTGGCTGTGCCAAT
GGCAAGGTGCAAATAATTCAGCAAATAAACCATGATGGAGAGGTTAACCG
GGCCCGTTATATGCCTCAGAATCCATTTCTTATTGCCACGAAGACTGTTA
GTGCTGAGGTCTATGTTTTTGATTATAGCAAACACCCTTCTAAACCTCCT
CTGGATGGTGCATGTAGTCCTGATCTGAGGCTGAGGGGCCATAGCACTGA
ANGATACGGTTTATCGTGGAGCAAGTTCAAGGAAGGTCATCTGTTAAGTG
GTTCTGATGATGCTCAAATATGTTTATG
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