CN185310

Overview
NameCN185310
Unique NameCN185310
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 4.014e-68
Identity = 121/181 (66.85%), Postives = 141/181 (77.90%), Query Frame = 1
Query:   40 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            S T GQVI CKAAVAWEA KP+ IE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++QPGDHV+P +  EC+EC  C S ++N+C  +   T  GVM+ND +SRFSI GKPIYHF+GTSTFS+YTV H   VAKINP APLDKVC+L CG+ST
Sbjct:    3 SSTQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVST 183          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 8.942e-68
Identity = 120/181 (66.30%), Postives = 141/181 (77.90%), Query Frame = 1
Query:   40 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            S T GQVI CKAAVAWEA +P+ IE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++QPGDHV+P +  EC+EC  C S ++N+C  +   T  GVM+ND +SRFSI GKPIYHF+GTSTFS+YTV H   VAKINP APLDKVC+L CG+ST
Sbjct:    3 SSTQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVST 183          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 7.570e-67
Identity = 121/181 (66.85%), Postives = 140/181 (77.35%), Query Frame = 1
Query:   40 SGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            S T GQVI CKAAVA+E  KPLVIE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVTD+QPGDHV+P +  ECKEC  C S ++N+C  +   T  GVM+ND +SRFS+ GKPIYHF+GTSTFS+YTV H   VAKINP APLDKVC+L CG+ T
Sbjct:    3 SPTQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPT 183          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 1.578e-64
Identity = 114/179 (63.69%), Postives = 138/179 (77.09%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            T GQVI CKAAVA+E  KPLVIE+V+VAPPQ  EVR+KIL+T+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++Q GDHV+P +  EC+EC  C S ++N+C  +   T  G+M+ND +SRFS+ GKPIYHF+GTSTFS+YTV H   VAKI+P APLDKVC+L CG+ T
Sbjct:    3 TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPT 181          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.062e-64
Identity = 117/179 (65.36%), Postives = 137/179 (76.54%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            T GQVI CKAAVAWE  KPL IE+VEVAPPQ NEVR++ILFT+LCHTD Y    K    LFP I GHEA GIVESVGEGVTD++PGDHV+P +  EC EC  C S ++N+C  +   T  GVM+ D +SRFS+KGKPIYHF+GTSTFS+YTV H   VAKI+P APLDKVC+L CG+ T
Sbjct:    2 TQGQVITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEGLFPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAATGVGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPT 180          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 228.024 bits (580), Expect = 2.608e-59
Identity = 105/175 (60.00%), Postives = 136/175 (77.71%), Query Frame = 1
Query:   55 QVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIS 579
            QVI C AAVAW AG+PLV+EEVEV+PPQ  E+R+K++ TSLC +D+  WE++    L PRIFGHEA GIVES+GEGVT+ + GDHVL VFTGEC  C HC S +SNMC +L +   +G+M +D ++RFSIKGKP+YH+   S+FSEYTV H GC  K++P APL K+C+LSCG++
Sbjct:   12 QVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQS---LLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMER-KGLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVA 182          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 3.188e-57
Identity = 108/178 (60.67%), Postives = 132/178 (74.16%), Query Frame = 1
Query:   49 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            A QVIRCKAAVAWEAGKPL IEE+EVAPPQ +EVR+KI+ T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  + +   +G+M  DG SRF+ KGKPI HF+GTSTFSEYTV     VAKI+P+APLDKVC+L CGIST
Sbjct:    2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGIST 178          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.275e-57
Identity = 102/182 (56.04%), Postives = 137/182 (75.27%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTP-LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRF--SIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            T G+VI CKAAVAW AG+PLV+E+V+V PPQ+ EVR++ILFTS+CHTD+  W+ + +    +PRI GHEA GIVESVGEGV ++  GDHVLP+FTGEC +C  C  + +N+C+   ++  + VM+ DG++RF  S   KPIYHF+ TSTFSEYTV    CV K++P  PL+K+ +LSCG+ST
Sbjct:    3 TQGKVITCKAAVAWGAGEPLVMEDVKVDPPQRLEVRIRILFTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEEMMAGDHVLPIFTGECGDCRVCKRDGANLCERFRVDPMKKVMVTDGKTRFFTSKDNKPIYHFLNTSTFSEYTVIDSACVLKVDPLFPLEKISLLSCGVST 184          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 218.394 bits (555), Expect = 2.066e-56
Identity = 106/178 (59.55%), Postives = 132/178 (74.16%), Query Frame = 1
Query:   49 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            A QVIRCKAAVAWEAGKPL IEE+EVAPP+ +EVR+KIL T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  + +   +G+M  DG SRF+ KGK ++HF+GTSTFSEYTV     VAKI+P+APLDKVC+L CGIST
Sbjct:    2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKSVFHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGIST 178          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 3.897e-55
Identity = 101/182 (55.49%), Postives = 130/182 (71.43%), Query Frame = 1
Query:   37 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            MS TAGQVI CKAAVAW A  PL IE ++VAPP+ +EVR+KIL+T++CHTD Y  +      LFP + GHE  GIVESVGEGVT   PGDHV+P++  +CKEC +C + ++N+C  + I+   G M  DG SRF+  GK ++HF+G STFSEYTV     + K+NP APL+KV +L CGIST
Sbjct:    1 MSSTAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFM-PDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGIST 181          
The following BLAST results are available for this feature:
BLAST of CN185310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
ADHX_ORYSI4.014e-6866.85Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSJ8.942e-6866.30Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_MAIZE7.570e-6766.85Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_ARATH1.578e-6463.69Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_PEA2.062e-6465.36Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHL6_ARATH2.608e-5960.00Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADHX_RAT3.188e-5760.67Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHL4_ARATH9.275e-5756.04Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]
ADHX_MOUSE2.066e-5659.55Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHX_CAEEL3.897e-5555.49Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001C06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185310 ID=CN185310; Name=CN185310; organism=Citrus sinensis; type=EST; length=583bp
AGGCAGGTGTTGAGAGTATCATCATTCATCATCAATATGTCTGGCACAGC
TGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAGGCGGGGAAGC
CACTGGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAAAAATGAAGTT
CGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATGTTTACTTCTG
GGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTTGGTCACGAAG
CTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGATCTCCAACCA
GGAGACCATGTTCTTCCTGTGTTCACAGGAGAGTGCAAGGAATGTCCTCA
CTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCACGATCAATACTG
ACAGGGGTGTTATGATTAATGATGGTCAGTCGAGATTCTCGATTAAGGGG
AAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTGAATACACTGT
TACCCATGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCCCCTCTTGACA
AAGTTTGTGTGCTTAGCTGTGGAATCTCCACAG
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