CN185310

Overview
NameCN185310
Unique NameCN185310
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length583
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 212.616 bits (540), Expect = 1.134e-54
Identity = 103/178 (57.87%), Postives = 131/178 (73.60%), Query Frame = 1
Query:   49 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            A +VI+CKAAVAWEAGKPL IEE+EVAPP+ +EVR+KI  T++CHTD Y          FP I GHE  GIVESVGEGVT+L+ GD V+P++  +C EC  C + ++N+C  + +   +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P+APLDKVC+L CGIST
Sbjct:    2 ANKVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIFATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTNLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGIST 178          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 212.231 bits (539), Expect = 1.481e-54
Identity = 103/178 (57.87%), Postives = 130/178 (73.03%), Query Frame = 1
Query:   49 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            A +VI+CKAAVAWEAGKPL IEE+EVAPP+ +EVR+KI+ T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  + +   +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CGIST
Sbjct:    2 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 178          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.481e-54
Identity = 100/179 (55.87%), Postives = 128/179 (71.51%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            TAGQVI+CKAAVAWEAGKPL +EEVEVAPP+  EVR+K++ T +CHTD Y          FP I GHE  G+VESVGEGVT  + GD V+P++  +C EC  C + ++N+C  + +   RG+M  D  SRF+ KGK ++HF+GTSTFSEYTV     +A ++P APLDKVC+L CGIST
Sbjct:    2 TAGQVIKCKAAVAWEAGKPLSLEEVEVAPPRAGEVRIKVVATGVCHTDAYTLSGSDPEGAFPVILGHEGAGLVESVGEGVTKFKAGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGRGLM-PDNTSRFTCKGKQLFHFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGIST 179          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 1.934e-54
Identity = 104/178 (58.43%), Postives = 130/178 (73.03%), Query Frame = 1
Query:   49 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            A QVI+CKAAVAWEAGKPL IEEVEVAPP+ +EVR+KI+ T++CHTD Y          +P I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  + +   +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CGIST
Sbjct:    2 ANQVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 178          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.627e-54
Identity = 100/179 (55.87%), Postives = 127/179 (70.95%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            TAG+VI+CKAAVAWE GKPL IEEVEVAPP  +EVR+K+  T +CHTD Y         LFP I GHE  G VESVGEGVT  +PGD V+P++  +C EC  C + ++N+C  + I   +G ++ D  SRF+ KGK ++HF+GTSTFSEYTV     +AK+N  AP+DKVC+L CGIST
Sbjct:    3 TAGKVIKCKAAVAWEPGKPLSIEEVEVAPPNAHEVRIKLFATGVCHTDAYTLSGSDPEGLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRITQGQG-LLPDKTSRFTCKGKQVFHFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGIST 180          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 7.349e-54
Identity = 101/178 (56.74%), Postives = 128/178 (71.91%), Query Frame = 1
Query:   49 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            A  VI+CKAAVAWEAGKPL IEE+EVAPP+ +EVR+KI+ T++CHTD Y          FP I GHE  GIVESVGEGVT  +PGD V+P++  +C EC  C + ++N+C  + +   +GVM  DG SRF+ KGK + HF+GTSTFSEYTV     + KIN +APLDKVC+L CG+ST
Sbjct:    1 ASGVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRVKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKFKPGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGVM-PDGTSRFTCKGKQVLHFMGTSTFSEYTVVADISLTKINASAPLDKVCLLGCGVST 177          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.637e-53
Identity = 100/179 (55.87%), Postives = 125/179 (69.83%), Query Frame = 1
Query:   46 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            T G+VI CKAAVAWEA KPLVIE++EV PPQK EVR+KIL+T +CHTD Y         +FP I GHE GGIVES+GEGVT ++ GDHV+P++  EC  C  C S ++N+C  + I   +G M  DG +RF  KGK I+HF+GTSTFS+YTV        +   APLDKVC+L CGI+T
Sbjct:    3 TEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPEGIFPCILGHEGGGIVESIGEGVTSVKVGDHVIPLYIPECGTCKFCTSNKTNLCSKIRITQGKGQM-PDGTTRFKCKGKEIFHFMGTSTFSQYTVLPEISCCVVREDAPLDKVCLLGCGITT 180          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 2.138e-53
Identity = 101/178 (56.74%), Postives = 129/178 (72.47%), Query Frame = 1
Query:   49 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            + +VI+CKAAVAWEAGKP+ IEEVEVAPP+ +EVR+KI+ T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +     +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CG+ST
Sbjct:    2 SAEVIKCKAAVAWEAGKPVSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPQTNLCQKIRTTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVST 178          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHL3_ARATH (Alcohol dehydrogenase-like 3 OS=Arabidopsis thaliana GN=At1g32780 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 6.221e-53
Identity = 102/192 (53.12%), Postives = 133/192 (69.27%), Query Frame = 1
Query:   37 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTP-LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSI---------KGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            M+ T G+VI CKAAV W    PLVI+E+ V PPQK EVR+KIL++S+CHTD+  W    +    FPRI GHEA GIVESVGEGV D++ GD+V+P F GEC EC  C  EESN+C+   ++  + VM+NDG +RFS          + +PIYHF+ TSTF+EYTV    CV KI+P +PL ++ +LSCG+ST
Sbjct:    1 MAETQGKVITCKAAVVWGPKVPLVIQEICVDPPQKMEVRVKILYSSICHTDLGCWNGTNEAERAFPRILGHEAVGIVESVGEGVKDVKEGDYVIPTFNGECGECKVCKREESNLCERYHVDPMKRVMVNDGGTRFSTTINKDGGSSQSQPIYHFLNTSTFTEYTVLDSACVVKIDPNSPLKQMSLLSCGVST 192          
BLAST of CN185310 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 206.068 bits (523), Expect = 1.061e-52
Identity = 99/182 (54.40%), Postives = 128/182 (70.33%), Query Frame = 1
Query:   37 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLTINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGIST 582
            MS T G+VI CKAAVAWEA KPLVIE++EVAPP+ +EVR+KI  T +CHTD +         LFP + GHE  GIVESVGEGVT+ + GDHV+ ++  +C EC  C S ++N+C  + +    GVM  +G SR S KG+ ++HF+GTSTF+EYTV     + KIN  APL+KVC+L CGIST
Sbjct:    1 MSATEGKVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGLFPVVLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVM-PEGTSRLSCKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCLLGCGIST 181          
The following BLAST results are available for this feature:
BLAST of CN185310 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
ADHX_RABIT1.134e-5457.87Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
ADHX_HUMAN1.481e-5457.87Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHH_GADMO1.481e-5455.87Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADHX_BOVIN1.934e-5458.43Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADHX_SPAAU5.627e-5455.87Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_UROHA7.349e-5456.74Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHX_DICDI1.637e-5355.87Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADHX_HORSE2.138e-5356.74Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHL3_ARATH6.221e-5353.13Alcohol dehydrogenase-like 3 OS=Arabidopsis thalia... [more]
ADHX_DROME1.061e-5254.40Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001C06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185310 ID=CN185310; Name=CN185310; organism=Citrus sinensis; type=EST; length=583bp
AGGCAGGTGTTGAGAGTATCATCATTCATCATCAATATGTCTGGCACAGC
TGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAGGCGGGGAAGC
CACTGGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAAAAATGAAGTT
CGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATGTTTACTTCTG
GGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTTGGTCACGAAG
CTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGATCTCCAACCA
GGAGACCATGTTCTTCCTGTGTTCACAGGAGAGTGCAAGGAATGTCCTCA
CTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCACGATCAATACTG
ACAGGGGTGTTATGATTAATGATGGTCAGTCGAGATTCTCGATTAAGGGG
AAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTGAATACACTGT
TACCCATGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCCCCTCTTGACA
AAGTTTGTGTGCTTAGCTGTGGAATCTCCACAG
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