CN185309

Overview
NameCN185309
Unique NameCN185309
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 317.005 bits (811), Expect = 7.232e-86
Identity = 154/199 (77.39%), Postives = 171/199 (85.93%), Query Frame = -3
Query:  180 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 776
            STGLGAT+NVAKP KG +VAIF            AR++GASRIIG+DLN +RF EA+KFG TEFVNPKD+DKPVQQV+A+MTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPFSEIN AFDLM  GE IRCIIRM+
Sbjct:  180 STGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRME 378          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 7.232e-86
Identity = 154/199 (77.39%), Postives = 171/199 (85.93%), Query Frame = -3
Query:  180 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 776
            STGLGAT+NVAKP KG +VAIF            AR++GASRIIG+DLN +RF EA+KFG TEFVNPKD+DKPVQQV+A+MTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPFSEIN AFDLM  GE IRCIIRM+
Sbjct:  180 STGLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRME 378          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 316.235 bits (809), Expect = 1.234e-85
Identity = 150/199 (75.38%), Postives = 172/199 (86.43%), Query Frame = -3
Query:  180 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 776
            STG GATVNVAKPKKGQ+VAIF            AR+SGASRIIGVDLNP++F +AKKFG T+FVNPKD+ KPV +V+ +MTNGG+DR+VECTG++ AMIS FECVHDGWGVAVLVGVP KDD FKTHPMN LNE+TLKGTFFGNYKPR+DLP+VVE YM KELE+EKFITH+VPFSEIN AFDLML GES+RC++RMD
Sbjct:  180 STGFGATVNVAKPKKGQTVAIFGLGAVGLAAMEGARLSGASRIIGVDLNPAKFEQAKKFGCTDFVNPKDHSKPVHEVLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMD 378          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.234e-85
Identity = 150/199 (75.38%), Postives = 172/199 (86.43%), Query Frame = -3
Query:  180 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 776
            STG GATVNVAKPKKGQ+VAIF            AR+SGASRIIGVDLNP++F +AKKFG T+FVNPKD+ KPV +V+ +MTNGG+DR+VECTG++ AMIS FECVHDGWGVAVLVGVP KDD FKTHPMN LNE+TLKGTFFGNYKPR+DLP+VVE YM KELE+EKFITH+VPFSEIN AFDLML GES+RC++RMD
Sbjct:  180 STGFGATVNVAKPKKGQTVAIFGLGAVGLAAMEGARLSGASRIIGVDLNPAKFEQAKKFGCTDFVNPKDHSKPVHEVLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRMD 378          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 315.464 bits (807), Expect = 2.104e-85
Identity = 151/199 (75.88%), Postives = 172/199 (86.43%), Query Frame = -3
Query:  180 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 776
            STGLGAT+NV KPKKG +VA+F            AR++GASRIIGVDLN +RF EAKKFG+TEFVNPKD+ KPVQ+VIA++TNGGVDRS+ECTG++QAMI AFECVHDGWGVAVLVGVP+KD  F THPMN LNERTLKGTFFGNYKPR+D+PSVVEKYMNKELEV+KFITH +PFS+INKAFD ML GE IRCII M+
Sbjct:  181 STGLGATLNVRKPKKGSTVAVFGLGAVGLAAAEGARMAGASRIIGVDLNSNRFEEAKKFGITEFVNPKDHKKPVQEVIAELTNGGVDRSIECTGNIQAMIPAFECVHDGWGVAVLVGVPHKDAVFTTHPMNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNKELEVDKFITHQLPFSQINKAFDYMLKGEGIRCIITME 379          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH2_MAIZE (Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.748e-85
Identity = 150/199 (75.38%), Postives = 175/199 (87.94%), Query Frame = -3
Query:  180 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 776
            STGLGAT+NVAKP KG +VAIF            AR++GASRIIGVD+NP+++ +AKKFG TEFVNPKD+DKPVQ+V+ ++TNGGVDRSVECTG+V AMISAFECVHDGWGVAVLVGVP+KDD FKTHPMN L+E+TLKGTFFGNYKPR+DLP+VVE YM KELE+EKFITH+VPFSEIN AFDLML GES+RCI+RM+
Sbjct:  180 STGLGATLNVAKPAKGSTVAIFGLGAVGLAAMEGARLAGASRIIGVDINPAKYEQAKKFGCTEFVNPKDHDKPVQEVLIELTNGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPHKDDQFKTHPMNFLSEKTLKGTFFGNYKPRTDLPNVVEMYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCIMRME 378          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.748e-85
Identity = 155/199 (77.89%), Postives = 169/199 (84.92%), Query Frame = -3
Query:  180 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 776
            STGLGA++NVAKP KG +VAIF            AR++GASRIIGVDLN  RF EA+KFG TEFVNPKD+ KPVQQV+ADMTNGGVDRSVECTG+V AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGN+KPR+DLP+VVE YM KELEVEKFITH+VPFSEIN AFDLM  GE IRCIIRMD
Sbjct:  180 STGLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNAVRFEEARKFGCTEFVNPKDHTKPVQQVLADMTNGGVDRSVECTGNVNAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVEMYMKKELEVEKFITHSVPFSEINTAFDLMAKGEGIRCIIRMD 378          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.781e-84
Identity = 152/199 (76.38%), Postives = 172/199 (86.43%), Query Frame = -3
Query:  180 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 776
            STGLGAT+NVAKPKKG +VA+F            AR+SGASRIIGVDL+  RF EAKKFGVTEFVNPK ++KPVQ+VIA++TN GVDRS+ECTGS +AMISAFECVHDGWGVAVLVGVP+KD  FKTHP+N LNERTLKGTFFGNYK R+D+PSVVEKYMNKELE+EKFITH VPFSEINKAF+ ML GE +RCIIRM+
Sbjct:  181 STGLGATLNVAKPKKGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDLHSDRFEEAKKFGVTEFVNPKAHEKPVQEVIAELTNRGVDRSIECTGSTEAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPVNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNKELELEKFITHKVPFSEINKAFEYMLKGEGLRCIIRME 379          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.411e-81
Identity = 143/199 (71.86%), Postives = 168/199 (84.42%), Query Frame = -3
Query:  180 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLMLAGESIRCIIRMD 776
            STGLGAT+NVAKPKKG +VAIF            AR++GASRIIGVDLNP+++ +AKKFG T+FVNPKD+ KPVQ+V+ +MTNGGVDR+VECTG + AMI+ FECVHDGWGVAVLVGVP+K+  FKTHPMN LNE+TLKGTFFGNYKPR+DLP VVE YM KEL++EKFITH+VPFS+IN AFDLML GE +RCI R D
Sbjct:  180 STGLGATLNVAKPKKGSTVAIFGLGAVGLAAMEGARMAGASRIIGVDLNPAKYEQAKKFGCTDFVNPKDHTKPVQEVLVEMTNGGVDRAVECTGHIDAMIATFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPEVVEMYMRKELDLEKFITHSVPFSQINTAFDLMLKGEGLRCITRTD 378          
BLAST of CN185309 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 300.442 bits (768), Expect = 7.005e-81
Identity = 144/186 (77.42%), Postives = 163/186 (87.63%), Query Frame = -3
Query:  219 STGLGATVNVAKPKKGQSVAIFXXXXXXXXXXXXARVSGASRIIGVDLNPSRFNEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSVECTGSVQAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEVEKFITHTVPFSEINKAFDLM 776
            STGLGA++NVAKP KG +VA+F            AR++GASRIIGVDLNPSRF EA+KFG TEFVNPKD++KPVQ+V+A+MTNGGVDRSVECTG++ AMI AFECVHDGWGVAVLVGVP+KD  FKTHPMN LNERTLKGTFFGNYKPR+DLP+VVE YM KELEVEKFITH+VPF+EINKAFDLM
Sbjct:  107 STGLGASINVAKPPKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCTEFVNPKDHNKPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFAEINKAFDLM 292          
The following BLAST results are available for this feature:
BLAST of CN185309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
ADH1_ORYSJ7.232e-8677.39Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI7.232e-8677.39Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH2_ORYSJ1.234e-8575.38Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI1.234e-8575.38Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADH_FRAAN2.104e-8575.88Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADH2_MAIZE2.748e-8575.38Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 S... [more]
ADH1_HORVU2.748e-8577.89Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]
ADH_MALDO1.781e-8476.38Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH3_HORVU1.411e-8171.86Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADH1_ZEALU7.005e-8177.42Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0001C06_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0001C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN185309 ID=CN185309; Name=CN185309; organism=Citrus sinensis; type=EST; length=778bp
TTTTTTTTTTTTTTTTTATATGTAGAAAACACAACTCTCTTGAAAGCCCT
CTTTCAGCAAGTCATCAAACATACAGCATAAATTACTTATTCTCGGGGTA
ATATATAACTTGGAAAATTATGTGATCATCTTCATTCTGCCTCCATTAGA
TTGATCAGCAACAGCAGACACATCTAACCATCCATGCGAATGATGCACCT
AATGCTTTCTCCCGCAAGCATGAGGTCAAATGCCTTGTTTATCTCCGAGA
AGGGCACAGTGTGAGTGATGAATTTCTCGACCTCCAACTCCTTGTTCATG
TATTTTTCAACAACAGAAGGAAGATCAGAGCGAGGTTTGTAGTTGCCAAA
GAAGGTACCCTTAAGAGTCCTCTCATTAAGCAGATTCATGGGATGAGTCT
TGAATGCATCATCTTTGTTTGGCACACCCACAAGCACAGCAACACCCCAA
CCATCGTGAACGCATTCAAATGCTGAAATCATGGCCTGGACGCTTCCAGT
ACATTCAACACTTCTATCCACTCCACCATTGGTCATGTCAGCAATCACCT
GTTGAACAGGTTTGTCATAATCTTTTGGATTCACAAACTCGGTAACCCCA
AACTTCTTGGCTTCATTGAATCTGCTTGGGTTCAAATCAACACCAATGAT
CCTGGAAGCCCCTGATACCCTTGCCCCTTCGGCAGCAGCGAGGCCAACTG
CACCCAATCCAAAAATGGCAACAGACTGGCCCTTCTTCGGTTTGGCGACA
TTAACAGTAGCCCCCAAACCTGTGGAGA
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